RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W MEC3Q02574 474 aa4.94□□□□□ -1.62
UBP16YPL072W TOS1P38288 455 aa4.93□□□□□ -1.62
UBP16YPL072W MCM5P29496 775 aaKnown RBP4.92□□□□□ -1.62
UBP16YPL072W PUB1P32588 453 aaKnown RBP RIP-Chip data4.92□□□□□ -1.62not detected
UBP16YPL072W GPT2P36148 743 aa4.92□□□□□ -1.62
UBP16YPL072W PPX1P38698 397 aa4.92□□□□□ -1.62
UBP16YPL072W DOT1Q04089 582 aaKnown RBP4.92□□□□□ -1.62
UBP16YPL072W YCS4Q06156 1176 aa4.92□□□□□ -1.62
UBP16YPL072W CYC7P00045 113 aa4.92□□□□□ -1.62
UBP16YPL072W MON1P53129 644 aa4.92□□□□□ -1.62
UBP16YPL072W MSC6Q08818 692 aaKnown RBP4.92□□□□□ -1.62
UBP16YPL072W PHO4P07270 312 aaKnown RBP4.91□□□□□ -1.62
UBP16YPL072W GCD6P32501 712 aaKnown RBP4.91□□□□□ -1.62
UBP16YPL072W VPS35P34110 944 aa4.91□□□□□ -1.62
UBP16YPL072W ARL1P38116 183 aaKnown RBP4.91□□□□□ -1.62
UBP16YPL072W REI1P38344 393 aaPredicted RBP4.91□□□□□ -1.62
UBP16YPL072W MMM1P41800 426 aa4.9□□□□□ -1.63
UBP16YPL072W CTH1P47976 325 aa4.9□□□□□ -1.63
UBP16YPL072W BRE4Q07660 1125 aa4.9□□□□□ -1.63
UBP16YPL072W TY1A-LR4P0C2I8 440 aaKnown RBP4.89□□□□□ -1.63
UBP16YPL072W TY1A-DR6P0CX70 440 aa4.89□□□□□ -1.63
UBP16YPL072W TY1A-ER1P0CX71 440 aa4.89□□□□□ -1.63
UBP16YPL072W TY1A-LR2P0CX72 440 aa4.89□□□□□ -1.63
UBP16YPL072W TY1A-PLP0CX73 440 aa4.89□□□□□ -1.63
UBP16YPL072W TY1A-JR1P0CX74 440 aa4.89□□□□□ -1.63
UBP16YPL072W TY1A-LR3P0CX75 440 aa4.89□□□□□ -1.63
UBP16YPL072W TY1A-ML2P0CX76 440 aa4.89□□□□□ -1.63
UBP16YPL072W MET4P32389 672 aa4.89□□□□□ -1.63
UBP16YPL072W LIP5P32875 414 aa4.89□□□□□ -1.63
UBP16YPL072W SHU2P38957 223 aa4.89□□□□□ -1.63
UBP16YPL072W MAG2Q06436 670 aaKnown RBP4.89□□□□□ -1.63
UBP16YPL072W TY1A-GR1Q12085 440 aa4.89□□□□□ -1.63
UBP16YPL072W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.89□□□□□ -1.63
UBP16YPL072W TY1A-OLQ92392 440 aaKnown RBP4.89□□□□□ -1.63
UBP16YPL072W YKL077WP36081 392 aa4.88□□□□□ -1.63
UBP16YPL072W EXO5P38289 585 aa4.88□□□□□ -1.63
UBP16YPL072W CIT3P43635 486 aa4.88□□□□□ -1.63
UBP16YPL072W NOG1Q02892 647 aaKnown RBP4.88□□□□□ -1.63
UBP16YPL072W ALG6Q12001 544 aaKnown RBP4.88□□□□□ -1.63
UBP16YPL072W SEC20P28791 383 aa4.87□□□□□ -1.63
UBP16YPL072W YOR059CQ08448 450 aaKnown RBP4.87□□□□□ -1.63
UBP16YPL072W WHI5Q12416 295 aa4.87□□□□□ -1.63
UBP16YPL072W PRP40P33203 583 aaKnown RBP4.87□□□□□ -1.63
UBP16YPL072W WHI3P34761 661 aaKnown RBP4.87□□□□□ -1.63
UBP16YPL072W MSH4P40965 878 aaPredicted RBP4.87□□□□□ -1.63
UBP16YPL072W DAK2P43550 591 aa4.87□□□□□ -1.63
UBP16YPL072W RPS4AP0CX35 261 aaKnown RBP4.86□□□□□ -1.63
UBP16YPL072W RPS4BP0CX36 261 aaKnown RBP4.86□□□□□ -1.63
UBP16YPL072W KAR2P16474 682 aaKnown RBP4.86□□□□□ -1.63
UBP16YPL072W ALT1P52893 592 aa4.86□□□□□ -1.63
UBP16YPL072W YGR045CP53229 120 aa4.86□□□□□ -1.63
UBP16YPL072W GCD1P09032 578 aaPredicted RBP4.85□□□□□ -1.63
UBP16YPL072W SLS1P42900 643 aa4.85□□□□□ -1.63
UBP16YPL072W RCM1P53972 490 aa4.85□□□□□ -1.63
UBP16YPL072W DAL4Q04895 635 aa4.85□□□□□ -1.63
UBP16YPL072W AVO1Q08236 1176 aa4.85□□□□□ -1.63
UBP16YPL072W OXR1Q08952 273 aa4.85□□□□□ -1.63
UBP16YPL072W NSI1Q12457 570 aa4.85□□□□□ -1.63
UBP16YPL072W SMY2P32909 740 aaKnown RBP4.84□□□□□ -1.63
UBP16YPL072W NNK1P36003 928 aa4.84□□□□□ -1.63
UBP16YPL072W NEM1P38757 446 aa4.84□□□□□ -1.63
UBP16YPL072W THI12P42883 340 aa4.84□□□□□ -1.63
UBP16YPL072W THI5P43534 340 aa4.84□□□□□ -1.63
UBP16YPL072W THI11P47183 340 aa4.84□□□□□ -1.63
UBP16YPL072W ELA1P53861 379 aaPredicted RBP4.84□□□□□ -1.63
UBP16YPL072W SDH1Q00711 640 aa4.84□□□□□ -1.63
UBP16YPL072W ULP1Q02724 621 aa4.84□□□□□ -1.63
UBP16YPL072W SEN54Q02825 467 aaPredicted RBP4.84□□□□□ -1.63
UBP16YPL072W THI13Q07748 340 aa4.84□□□□□ -1.63
UBP16YPL072W MSH3P25336 1018 aa4.83□□□□□ -1.64
UBP16YPL072W NFS1P25374 497 aa4.83□□□□□ -1.64
UBP16YPL072W UGA4P32837 571 aa4.83□□□□□ -1.64
UBP16YPL072W IPL1P38991 367 aa4.83□□□□□ -1.64
UBP16YPL072W OYE3P41816 400 aaPredicted RBP4.83□□□□□ -1.64
UBP16YPL072W MTR4P47047 1073 aaKnown RBP4.83□□□□□ -1.64
UBP16YPL072W VMA4P22203 233 aaKnown RBP4.82□□□□□ -1.64
UBP16YPL072W SEA4P38164 1038 aa4.82□□□□□ -1.64
UBP16YPL072W RSM26P47141 266 aa4.82□□□□□ -1.64
UBP16YPL072W PEX13P80667 386 aa4.82□□□□□ -1.64
UBP16YPL072W EAR1Q03212 550 aa4.82□□□□□ -1.64
UBP16YPL072W TOS4Q06266 489 aa4.82□□□□□ -1.64
UBP16YPL072W SLD2P34252 453 aa4.82□□□□□ -1.64
UBP16YPL072W SQT1P35184 431 aa4.82□□□□□ -1.64
UBP16YPL072W AVT1P47082 602 aa4.82□□□□□ -1.64
UBP16YPL072W UTP5Q04177 643 aaKnown RBP4.82□□□□□ -1.64
UBP16YPL072W YVC1Q12324 675 aa4.82□□□□□ -1.64
UBP16YPL072W YAR028WP39548 234 aa4.81□□□□□ -1.64
UBP16YPL072W YPL109CQ02981 657 aa4.81□□□□□ -1.64
UBP16YPL072W RPT1P33299 467 aaKnown RBP4.8□□□□□ -1.64
UBP16YPL072W PEX28P38848 579 aa4.8□□□□□ -1.64
UBP16YPL072W IRC24P40580 263 aa4.8□□□□□ -1.64
UBP16YPL072W ADI1Q03677 179 aa4.8□□□□□ -1.64
UBP16YPL072W HXK1P04806 485 aaKnown RBP4.79□□□□□ -1.64
UBP16YPL072W RDH54P38086 958 aa4.79□□□□□ -1.64
UBP16YPL072W FAA3P39002 694 aa4.79□□□□□ -1.64
UBP16YPL072W XKS1P42826 600 aa4.79□□□□□ -1.64
UBP16YPL072W TRE1Q08919 783 aa4.79□□□□□ -1.64
UBP16YPL072W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
UBP16YPL072W ELM1P32801 640 aa4.78□□□□□ -1.64
UBP16YPL072W HSE1P38753 452 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms