RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W MSN5P52918 1224 aa2.96□□□□□ -1.94
VPS16YPL045W FOL1P53848 824 aa2.96□□□□□ -1.94
VPS16YPL045W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
VPS16YPL045W EAF1Q06337 982 aa2.96□□□□□ -1.94
VPS16YPL045W HDA2Q06629 674 aa2.96□□□□□ -1.94
VPS16YPL045W FMP25Q08023 583 aa2.96□□□□□ -1.94
VPS16YPL045W SBP1P10080 294 aaKnown RBP2.96□□□□□ -1.94
VPS16YPL045W HEM13P11353 328 aaKnown RBP2.96□□□□□ -1.94
VPS16YPL045W MSH2P25847 964 aa2.96□□□□□ -1.94
VPS16YPL045W RAD27P26793 382 aa2.96□□□□□ -1.94
VPS16YPL045W IRE1P32361 1115 aa2.96□□□□□ -1.94
VPS16YPL045W ABD1P32783 436 aaPredicted RBP2.96□□□□□ -1.94
VPS16YPL045W SQT1P35184 431 aa2.96□□□□□ -1.94
VPS16YPL045W VBA5P36172 582 aa2.96□□□□□ -1.94
VPS16YPL045W HXT13P39924 564 aa2.96□□□□□ -1.94
VPS16YPL045W YTA6P40328 754 aa2.96□□□□□ -1.94
VPS16YPL045W ERP6P53198 216 aa2.96□□□□□ -1.94
VPS16YPL045W HXT17P53631 564 aa2.96□□□□□ -1.94
VPS16YPL045W HXT15P54854 567 aa2.96□□□□□ -1.94
VPS16YPL045W PMT7Q06644 662 aa2.96□□□□□ -1.94
VPS16YPL045W NTG2Q08214 380 aa2.96□□□□□ -1.94
VPS16YPL045W CHL1P22516 861 aaPredicted RBP2.95□□□□□ -1.94
VPS16YPL045W RER2P35196 286 aa2.95□□□□□ -1.94
VPS16YPL045W PAF1P38351 445 aa2.95□□□□□ -1.94
VPS16YPL045W PEX28P38848 579 aa2.95□□□□□ -1.94
VPS16YPL045W YIL165CP40446 119 aa2.95□□□□□ -1.94
VPS16YPL045W YGL140CP53120 1219 aa2.95□□□□□ -1.94
VPS16YPL045W TPO2P53283 614 aa2.95□□□□□ -1.94
VPS16YPL045W TAF8Q03750 510 aa2.95□□□□□ -1.94
VPS16YPL045W SEC23P15303 768 aaKnown RBP2.95□□□□□ -1.94
VPS16YPL045W ARE1P25628 610 aa2.95□□□□□ -1.94
VPS16YPL045W SBA1P28707 216 aaKnown RBP2.95□□□□□ -1.94
VPS16YPL045W MRP8P35719 219 aa2.95□□□□□ -1.94
VPS16YPL045W UTP8P53276 713 aaKnown RBP2.95□□□□□ -1.94
VPS16YPL045W PEX13P80667 386 aa2.95□□□□□ -1.94
VPS16YPL045W CUS1Q02554 436 aaPredicted RBP2.95□□□□□ -1.94
VPS16YPL045W NOG1Q02892 647 aaKnown RBP2.95□□□□□ -1.94
VPS16YPL045W SPO20Q04359 397 aa2.95□□□□□ -1.94
VPS16YPL045W YLR225CQ05948 407 aaKnown RBP2.95□□□□□ -1.94
VPS16YPL045W TY1A-DR3Q12441 440 aa2.95□□□□□ -1.94
VPS16YPL045W TAF13P11747 167 aa2.94□□□□□ -1.94
VPS16YPL045W MSH3P25336 1018 aa2.94□□□□□ -1.94
VPS16YPL045W MRC1P25588 1096 aa2.94□□□□□ -1.94
VPS16YPL045W SLA1P32790 1244 aa2.94□□□□□ -1.94
VPS16YPL045W SEC6P32844 805 aa2.94□□□□□ -1.94
VPS16YPL045W PBY1P38254 753 aa2.94□□□□□ -1.94
VPS16YPL045W RIM11P38615 370 aa2.94□□□□□ -1.94
VPS16YPL045W HUL4P40985 892 aa2.94□□□□□ -1.94
VPS16YPL045W SKP1P52286 194 aa2.94□□□□□ -1.94
VPS16YPL045W RTA1P53047 317 aa2.94□□□□□ -1.94
VPS16YPL045W ITC1P53125 1264 aa2.94□□□□□ -1.94
VPS16YPL045W CMR1Q12510 522 aaKnown RBP2.94□□□□□ -1.94
VPS16YPL045W PUF4P25339 888 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94 RIP-Chip
VPS16YPL045W PDC6P26263 563 aaKnown RBP2.94□□□□□ -1.94
VPS16YPL045W SFP1P32432 683 aa2.94□□□□□ -1.94
VPS16YPL045W LYP1P32487 611 aa2.94□□□□□ -1.94
VPS16YPL045W BET3P36149 193 aa2.94□□□□□ -1.94
VPS16YPL045W KRI1P42846 591 aaKnown RBP2.94□□□□□ -1.94
VPS16YPL045W SIW14P53965 281 aa2.94□□□□□ -1.94
VPS16YPL045W HED1Q03937 162 aa2.94□□□□□ -1.94
VPS16YPL045W ATG13Q06628 738 aa2.94□□□□□ -1.94
VPS16YPL045W PSH1Q12161 406 aa2.94□□□□□ -1.94
VPS16YPL045W REC8Q12188 680 aa2.94□□□□□ -1.94
VPS16YPL045W TY1B-DR4Q07793 1604 aa2.93□□□□□ -1.94
VPS16YPL045W LEU1P07264 779 aaKnown RBP2.93□□□□□ -1.94
VPS16YPL045W PRP5P21372 849 aaPredicted RBP2.93□□□□□ -1.94
VPS16YPL045W NPR1P22211 790 aa2.93□□□□□ -1.94
VPS16YPL045W AHP1P38013 176 aaKnown RBP2.93□□□□□ -1.94
VPS16YPL045W RDH54P38086 958 aa2.93□□□□□ -1.94
VPS16YPL045W APM2P38700 605 aa2.93□□□□□ -1.94
VPS16YPL045W HSV2P50079 448 aaPredicted RBP2.93□□□□□ -1.94
VPS16YPL045W MAL11P53048 616 aa2.93□□□□□ -1.94
VPS16YPL045W PEX8P53248 589 aa2.93□□□□□ -1.94
VPS16YPL045W UGO1Q03327 502 aa2.93□□□□□ -1.94
VPS16YPL045W ALR2P43553 858 aa2.93□□□□□ -1.94
VPS16YPL045W YGR237CP50089 785 aa2.93□□□□□ -1.94
VPS16YPL045W YNR040WP53736 256 aa2.93□□□□□ -1.94
VPS16YPL045W TFB2Q02939 513 aa2.93□□□□□ -1.94
VPS16YPL045W DAL1P32375 460 aa2.92□□□□□ -1.94
VPS16YPL045W MOT2P34909 587 aaKnown RBP2.92□□□□□ -1.94
VPS16YPL045W NAB3P38996 802 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
VPS16YPL045W HLJ1P48353 224 aa2.92□□□□□ -1.94
VPS16YPL045W ROD1Q02805 837 aa2.92□□□□□ -1.94
VPS16YPL045W MET32Q12041 191 aa2.92□□□□□ -1.94
VPS16YPL045W SRF1Q12516 437 aa2.92□□□□□ -1.94
VPS16YPL045W INO80P53115 1489 aa2.92□□□□□ -1.94
VPS16YPL045W TCB3Q03640 1545 aaKnown RBP2.92□□□□□ -1.94
VPS16YPL045W KAR1P11927 433 aa2.92□□□□□ -1.94
VPS16YPL045W INO1P11986 533 aa2.92□□□□□ -1.94
VPS16YPL045W UGA3P26370 528 aa2.92□□□□□ -1.94
VPS16YPL045W AAD14P42884 376 aa2.92□□□□□ -1.94
VPS16YPL045W YJR120WP47157 116 aa2.92□□□□□ -1.94
VPS16YPL045W ENT3P47160 408 aa2.92□□□□□ -1.94
VPS16YPL045W TIF35Q04067 274 aaKnown RBP2.92□□□□□ -1.94
VPS16YPL045W TMA17Q12513 150 aa2.92□□□□□ -1.94
VPS16YPL045W RGP1P16664 663 aa2.91□□□□□ -1.94
VPS16YPL045W PRP9P19736 530 aaKnown RBP2.91□□□□□ -1.94
VPS16YPL045W VMA4P22203 233 aaKnown RBP2.91□□□□□ -1.94
VPS16YPL045W MKK2P32491 506 aa2.91□□□□□ -1.94
VPS16YPL045W PEX6P33760 1030 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 73.2 ms