RNA–Protein interactions for RNA: YOR224C

RPB8, Transcript of RNA polymerase subunit ABC14.5, yeastyeast

Gene RPB8, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB8YOR224C ASF1P32447 279 aa6.29□□□□□ -1.4
RPB8YOR224C UTP22P53254 1237 aaPredicted RBP6.29□□□□□ -1.4
RPB8YOR224C RGA2Q06407 1009 aa6.29□□□□□ -1.4
RPB8YOR224C ATE1P16639 503 aa6.28□□□□□ -1.4
RPB8YOR224C COQ2P32378 372 aa6.28□□□□□ -1.4
RPB8YOR224C UGA4P32837 571 aa6.28□□□□□ -1.4
RPB8YOR224C ATG14P38270 344 aa6.28□□□□□ -1.4
RPB8YOR224C CCT8P47079 568 aaKnown RBP6.28□□□□□ -1.4
RPB8YOR224C PEP7P32609 515 aa6.27□□□□□ -1.41
RPB8YOR224C AKR1P39010 764 aa6.27□□□□□ -1.41
RPB8YOR224C SAP155P43612 1002 aa6.27□□□□□ -1.41
RPB8YOR224C ARI1P53111 347 aaKnown RBP6.27□□□□□ -1.41
RPB8YOR224C ULP1Q02724 621 aa6.27□□□□□ -1.41
RPB8YOR224C YPL034WQ03083 165 aa6.27□□□□□ -1.41
RPB8YOR224C YIG1Q08956 461 aa6.27□□□□□ -1.41
RPB8YOR224C PRP5P21372 849 aaPredicted RBP6.26□□□□□ -1.41
RPB8YOR224C REI1P38344 393 aaPredicted RBP6.26□□□□□ -1.41
RPB8YOR224C GCV1P48015 400 aa6.26□□□□□ -1.41
RPB8YOR224C ALG6Q12001 544 aaKnown RBP6.26□□□□□ -1.41
RPB8YOR224C FAA3P39002 694 aa6.25□□□□□ -1.41
RPB8YOR224C RPS26AP39938 119 aaKnown RBP6.25□□□□□ -1.41
RPB8YOR224C RPS26BP39939 119 aaKnown RBP6.25□□□□□ -1.41
RPB8YOR224C AVO1Q08236 1176 aa6.25□□□□□ -1.41
RPB8YOR224C YOR223WQ12015 292 aa6.25□□□□□ -1.41
RPB8YOR224C PRE9P23638 258 aaKnown RBP6.24□□□□□ -1.41
RPB8YOR224C MSH3P25336 1018 aa6.24□□□□□ -1.41
RPB8YOR224C MCM2P29469 868 aa6.24□□□□□ -1.41
RPB8YOR224C NAM7P30771 971 aaKnown RBP6.24□□□□□ -1.41
RPB8YOR224C SEC8P32855 1065 aa6.24□□□□□ -1.41
RPB8YOR224C MRPS18P42847 217 aa6.24□□□□□ -1.41
RPB8YOR224C MEC3Q02574 474 aa6.24□□□□□ -1.41
RPB8YOR224C TOS4Q06266 489 aa6.24□□□□□ -1.41
RPB8YOR224C NCE103P53615 221 aa6.23□□□□□ -1.41
RPB8YOR224C OYE2Q03558 400 aaKnown RBP6.23□□□□□ -1.41
RPB8YOR224C DOT1Q04089 582 aaKnown RBP6.23□□□□□ -1.41
RPB8YOR224C REC8Q12188 680 aa6.23□□□□□ -1.41
RPB8YOR224C PEX28P38848 579 aa6.22□□□□□ -1.41
RPB8YOR224C MTR4P47047 1073 aaKnown RBP6.22□□□□□ -1.41
RPB8YOR224C YGR122WP53272 402 aa6.22□□□□□ -1.41
RPB8YOR224C ADI1Q03677 179 aa6.22□□□□□ -1.41
RPB8YOR224C SPR28Q04921 423 aa6.22□□□□□ -1.41
RPB8YOR224C HXK1P04806 485 aaKnown RBP6.21□□□□□ -1.42
RPB8YOR224C CHS2P14180 963 aa6.21□□□□□ -1.42
RPB8YOR224C GIC2Q06648 383 aa6.21□□□□□ -1.42
RPB8YOR224C TY1A-LR4P0C2I8 440 aaKnown RBP6.2□□□□□ -1.42
RPB8YOR224C TY1A-DR6P0CX70 440 aa6.2□□□□□ -1.42
RPB8YOR224C TY1A-ER1P0CX71 440 aa6.2□□□□□ -1.42
RPB8YOR224C TY1A-LR2P0CX72 440 aa6.2□□□□□ -1.42
RPB8YOR224C TY1A-PLP0CX73 440 aa6.2□□□□□ -1.42
RPB8YOR224C TY1A-JR1P0CX74 440 aa6.2□□□□□ -1.42
RPB8YOR224C TY1A-LR3P0CX75 440 aa6.2□□□□□ -1.42
RPB8YOR224C TY1A-ML2P0CX76 440 aa6.2□□□□□ -1.42
RPB8YOR224C KAE1P36132 386 aa6.2□□□□□ -1.42
RPB8YOR224C GPT2P36148 743 aa6.2□□□□□ -1.42
RPB8YOR224C EXO5P38289 585 aa6.2□□□□□ -1.42
RPB8YOR224C SLS1P42900 643 aa6.2□□□□□ -1.42
RPB8YOR224C YNR063WP53749 607 aa6.2□□□□□ -1.42
RPB8YOR224C NOG1Q02892 647 aaKnown RBP6.2□□□□□ -1.42
RPB8YOR224C TY1A-GR1Q12085 440 aa6.2□□□□□ -1.42
RPB8YOR224C MCD1Q12158 566 aa6.2□□□□□ -1.42
RPB8YOR224C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.2□□□□□ -1.42
RPB8YOR224C TY1A-OLQ92392 440 aaKnown RBP6.2□□□□□ -1.42
RPB8YOR224C RAD2P07276 1031 aa6.19□□□□□ -1.42
RPB8YOR224C SAF1P38352 637 aa6.19□□□□□ -1.42
RPB8YOR224C ELA1P53861 379 aaPredicted RBP6.19□□□□□ -1.42
RPB8YOR224C YPL109CQ02981 657 aa6.19□□□□□ -1.42
RPB8YOR224C FYV10P40492 516 aa6.18□□□□□ -1.42
RPB8YOR224C YJR107WP47145 328 aa6.18□□□□□ -1.42
RPB8YOR224C RRP15Q06511 250 aaPredicted RBP6.18□□□□□ -1.42
RPB8YOR224C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
RPB8YOR224C DED1P06634 604 aaKnown RBP6.17□□□□□ -1.42
RPB8YOR224C CYC8P14922 966 aa6.17□□□□□ -1.42
RPB8YOR224C VMA4P22203 233 aaKnown RBP6.17□□□□□ -1.42
RPB8YOR224C ARL1P38116 183 aaKnown RBP6.17□□□□□ -1.42
RPB8YOR224C SPO74P45819 413 aa6.17□□□□□ -1.42
RPB8YOR224C LAP2Q10740 671 aa6.17□□□□□ -1.42
RPB8YOR224C NEM1P38757 446 aa6.16□□□□□ -1.42
RPB8YOR224C XKS1P42826 600 aa6.16□□□□□ -1.42
RPB8YOR224C YGR045CP53229 120 aa6.16□□□□□ -1.42
RPB8YOR224C YGR130CP53278 816 aa6.16□□□□□ -1.42
RPB8YOR224C HSE1P38753 452 aa6.15□□□□□ -1.42
RPB8YOR224C YAR028WP39548 234 aa6.15□□□□□ -1.42
RPB8YOR224C YGL140CP53120 1219 aa6.15□□□□□ -1.42
RPB8YOR224C UTP5Q04177 643 aaKnown RBP6.15□□□□□ -1.42
RPB8YOR224C ESF1Q06344 628 aaKnown RBP6.15□□□□□ -1.42
RPB8YOR224C YLR122CQ12312 125 aa6.15□□□□□ -1.42
RPB8YOR224C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
RPB8YOR224C PIC2P40035 300 aa6.14□□□□□ -1.43
RPB8YOR224C MSH4P40965 878 aaPredicted RBP6.14□□□□□ -1.43
RPB8YOR224C MMM1P41800 426 aa6.14□□□□□ -1.43
RPB8YOR224C ALO1P54783 526 aaKnown RBP6.14□□□□□ -1.43
RPB8YOR224C MRL1Q06815 381 aa6.14□□□□□ -1.43
RPB8YOR224C NSI1Q12457 570 aa6.14□□□□□ -1.43
RPB8YOR224C RPS4AP0CX35 261 aaKnown RBP6.13□□□□□ -1.43
RPB8YOR224C RPS4BP0CX36 261 aaKnown RBP6.13□□□□□ -1.43
RPB8YOR224C NFS1P25374 497 aa6.13□□□□□ -1.43
RPB8YOR224C PGM1P33401 570 aaKnown RBP6.13□□□□□ -1.43
RPB8YOR224C WHI3P34761 661 aaKnown RBP6.13□□□□□ -1.43
RPB8YOR224C EST2Q06163 884 aa6.13□□□□□ -1.43
RPB8YOR224C NNK1P36003 928 aa6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms