RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	TY1A-OL	Q92392	440 aa	Known RBP	5.32	□□□□□ -1.56
TSR4	YOL022C	VPS35	P34110	944 aa		5.31	□□□□□ -1.56
TSR4	YOL022C	MEC3	Q02574	474 aa		5.31	□□□□□ -1.56
TSR4	YOL022C	TRP3	P00937	484 aa		5.3	□□□□□ -1.56
TSR4	YOL022C	SEC20	P28791	383 aa		5.3	□□□□□ -1.56
TSR4	YOL022C	MCM5	P29496	775 aa	Known RBP	5.3	□□□□□ -1.56
TSR4	YOL022C	KAE1	P36132	386 aa		5.3	□□□□□ -1.56
TSR4	YOL022C	YKR073C	P36153	106 aa		5.3	□□□□□ -1.56
TSR4	YOL022C	IPL1	P38991	367 aa		5.3	□□□□□ -1.56
TSR4	YOL022C	RVS167	P39743	482 aa	Known RBP	5.3	□□□□□ -1.56
TSR4	YOL022C	UTP22	P53254	1237 aa	Predicted RBP	5.3	□□□□□ -1.56
TSR4	YOL022C	ALO1	P54783	526 aa	Known RBP	5.3	□□□□□ -1.56
TSR4	YOL022C	NOP8	Q08287	484 aa	Predicted RBP	5.3	□□□□□ -1.56
TSR4	YOL022C	YOR223W	Q12015	292 aa		5.3	□□□□□ -1.56
TSR4	YOL022C	GCD6	P32501	712 aa	Known RBP	5.29	□□□□□ -1.56
TSR4	YOL022C	PRP40	P33203	583 aa	Known RBP	5.29	□□□□□ -1.56
TSR4	YOL022C	EXO5	P38289	585 aa		5.29	□□□□□ -1.56
TSR4	YOL022C	DAK2	P43550	591 aa		5.29	□□□□□ -1.56
TSR4	YOL022C	INP52	P50942	1183 aa		5.29	□□□□□ -1.56
TSR4	YOL022C	YMR074C	Q04773	145 aa		5.29	□□□□□ -1.56
TSR4	YOL022C	UGA4	P32837	571 aa		5.28	□□□□□ -1.56
TSR4	YOL022C	YML020W	Q03722	664 aa		5.28	□□□□□ -1.56
TSR4	YOL022C	CHS2	P14180	963 aa		5.27	□□□□□ -1.57
TSR4	YOL022C	GPT2	P36148	743 aa		5.27	□□□□□ -1.57
TSR4	YOL022C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.27	□□□□□ -1.57	not detected
TSR4	YOL022C	NOG1	Q02892	647 aa	Known RBP	5.27	□□□□□ -1.57
TSR4	YOL022C	DOT1	Q04089	582 aa	Known RBP	5.27	□□□□□ -1.57
TSR4	YOL022C	YLL054C	Q12244	843 aa		5.27	□□□□□ -1.57
TSR4	YOL022C	ARL1	P38116	183 aa	Known RBP	5.26	□□□□□ -1.57
TSR4	YOL022C	REI1	P38344	393 aa	Predicted RBP	5.26	□□□□□ -1.57
TSR4	YOL022C	NEM1	P38757	446 aa		5.26	□□□□□ -1.57
TSR4	YOL022C	THI12	P42883	340 aa		5.26	□□□□□ -1.57
TSR4	YOL022C	THI5	P43534	340 aa		5.26	□□□□□ -1.57
TSR4	YOL022C	SPO74	P45819	413 aa		5.26	□□□□□ -1.57
TSR4	YOL022C	THI11	P47183	340 aa		5.26	□□□□□ -1.57
TSR4	YOL022C	YGR130C	P53278	816 aa		5.26	□□□□□ -1.57
TSR4	YOL022C	DAL4	Q04895	635 aa		5.26	□□□□□ -1.57
TSR4	YOL022C	GIC2	Q06648	383 aa		5.26	□□□□□ -1.57
TSR4	YOL022C	THI13	Q07748	340 aa		5.26	□□□□□ -1.57
TSR4	YOL022C	MED7	Q08278	222 aa		5.26	□□□□□ -1.57
TSR4	YOL022C	FAA3	P39002	694 aa		5.25	□□□□□ -1.57
TSR4	YOL022C	CTH1	P47976	325 aa		5.25	□□□□□ -1.57
TSR4	YOL022C	ULP1	Q02724	621 aa		5.25	□□□□□ -1.57
TSR4	YOL022C	ALG6	Q12001	544 aa	Known RBP	5.25	□□□□□ -1.57
TSR4	YOL022C	MSB1	P21339	1137 aa	Known RBP	5.24	□□□□□ -1.57
TSR4	YOL022C	OMA1	P36163	345 aa		5.24	□□□□□ -1.57
TSR4	YOL022C	TOS1	P38288	455 aa		5.24	□□□□□ -1.57
TSR4	YOL022C	SLS1	P42900	643 aa		5.24	□□□□□ -1.57
TSR4	YOL022C	YPL109C	Q02981	657 aa		5.24	□□□□□ -1.57
TSR4	YOL022C	HXK1	P04806	485 aa	Known RBP	5.23	□□□□□ -1.57
TSR4	YOL022C	MSH4	P40965	878 aa	Predicted RBP	5.23	□□□□□ -1.57
TSR4	YOL022C	YGR045C	P53229	120 aa		5.23	□□□□□ -1.57
TSR4	YOL022C	KAR2	P16474	682 aa	Known RBP	5.22	□□□□□ -1.57
TSR4	YOL022C	MSH3	P25336	1018 aa		5.22	□□□□□ -1.57
TSR4	YOL022C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.22	□□□□□ -1.57	not detected
TSR4	YOL022C	RPT1	P33299	467 aa	Known RBP	5.22	□□□□□ -1.57
TSR4	YOL022C	SLD2	P34252	453 aa		5.22	□□□□□ -1.57
TSR4	YOL022C	MAC1	P35192	417 aa		5.22	□□□□□ -1.57
TSR4	YOL022C	YKL077W	P36081	392 aa		5.22	□□□□□ -1.57
TSR4	YOL022C	SHU2	P38957	223 aa		5.22	□□□□□ -1.57
TSR4	YOL022C	ALT1	P52893	592 aa		5.22	□□□□□ -1.57
TSR4	YOL022C	MAG2	Q06436	670 aa	Known RBP	5.22	□□□□□ -1.57
TSR4	YOL022C	RRP15	Q06511	250 aa	Predicted RBP	5.22	□□□□□ -1.57
TSR4	YOL022C	CYC7	P00045	113 aa		5.21	□□□□□ -1.58
TSR4	YOL022C	HEM13	P11353	328 aa	Known RBP	5.21	□□□□□ -1.58
TSR4	YOL022C	WHI3	P34761	661 aa	Known RBP	5.21	□□□□□ -1.58
TSR4	YOL022C	RDH54	P38086	958 aa		5.21	□□□□□ -1.58
TSR4	YOL022C	SEA4	P38164	1038 aa		5.21	□□□□□ -1.58
TSR4	YOL022C	EAR1	Q03212	550 aa		5.21	□□□□□ -1.58
TSR4	YOL022C	ADI1	Q03677	179 aa		5.21	□□□□□ -1.58
TSR4	YOL022C	UTP5	Q04177	643 aa	Known RBP	5.21	□□□□□ -1.58
TSR4	YOL022C	OXR1	Q08952	273 aa		5.21	□□□□□ -1.58
TSR4	YOL022C	GCD1	P09032	578 aa	Predicted RBP	5.2	□□□□□ -1.58
TSR4	YOL022C	RPS4A	P0CX35	261 aa	Known RBP	5.2	□□□□□ -1.58
TSR4	YOL022C	RPS4B	P0CX36	261 aa	Known RBP	5.2	□□□□□ -1.58
TSR4	YOL022C	ATE1	P16639	503 aa		5.2	□□□□□ -1.58
TSR4	YOL022C	PEX28	P38848	579 aa		5.2	□□□□□ -1.58
TSR4	YOL022C	PIC2	P40035	300 aa		5.2	□□□□□ -1.58
TSR4	YOL022C	MMM1	P41800	426 aa		5.2	□□□□□ -1.58
TSR4	YOL022C	ELA1	P53861	379 aa	Predicted RBP	5.2	□□□□□ -1.58
TSR4	YOL022C	BRE4	Q07660	1125 aa		5.2	□□□□□ -1.58
TSR4	YOL022C	SMY2	P32909	740 aa	Known RBP	5.19	□□□□□ -1.58
TSR4	YOL022C	CIT3	P43635	486 aa		5.19	□□□□□ -1.58
TSR4	YOL022C	MTR4	P47047	1073 aa	Known RBP	5.19	□□□□□ -1.58
TSR4	YOL022C	RSM26	P47141	266 aa		5.19	□□□□□ -1.58
TSR4	YOL022C	YGL140C	P53120	1219 aa		5.19	□□□□□ -1.58
TSR4	YOL022C	PEX13	P80667	386 aa		5.19	□□□□□ -1.58
TSR4	YOL022C	SEC23	P15303	768 aa	Known RBP	5.18	□□□□□ -1.58
TSR4	YOL022C	VMA4	P22203	233 aa	Known RBP	5.18	□□□□□ -1.58
TSR4	YOL022C	OYE3	P41816	400 aa	Predicted RBP	5.18	□□□□□ -1.58
TSR4	YOL022C	YJR107W	P47145	328 aa		5.18	□□□□□ -1.58
TSR4	YOL022C	YGR122W	P53272	402 aa		5.18	□□□□□ -1.58
TSR4	YOL022C	AVO1	Q08236	1176 aa		5.18	□□□□□ -1.58
TSR4	YOL022C	NFS1	P25374	497 aa		5.17	□□□□□ -1.58
TSR4	YOL022C	SQT1	P35184	431 aa		5.17	□□□□□ -1.58
TSR4	YOL022C	YAR028W	P39548	234 aa		5.17	□□□□□ -1.58
TSR4	YOL022C	XKS1	P42826	600 aa		5.17	□□□□□ -1.58
TSR4	YOL022C	POL32	P47110	350 aa		5.17	□□□□□ -1.58
TSR4	YOL022C	SDH1	Q00711	640 aa		5.17	□□□□□ -1.58
TSR4	YOL022C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	RIP-Chip

Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms