RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	YPT11	P48559	417 aa		4.4	□□□□□ -1.71
ATG2	YNL242W	RRP15	Q06511	250 aa	Predicted RBP	4.4	□□□□□ -1.71
ATG2	YNL242W	IOC2	Q12072	812 aa		4.4	□□□□□ -1.71
ATG2	YNL242W	GCD7	P32502	381 aa	Predicted RBP	4.39	□□□□□ -1.71
ATG2	YNL242W	MLC1	P53141	149 aa		4.39	□□□□□ -1.71
ATG2	YNL242W	ARO80	Q04052	950 aa		4.39	□□□□□ -1.71
ATG2	YNL242W	MTF2	P10849	440 aa		4.39	□□□□□ -1.71
ATG2	YNL242W	VMA4	P22203	233 aa	Known RBP	4.39	□□□□□ -1.71
ATG2	YNL242W	PSO2	P30620	661 aa		4.39	□□□□□ -1.71
ATG2	YNL242W	ATG36	P46983	293 aa		4.39	□□□□□ -1.71
ATG2	YNL242W	PIB2	P53191	635 aa		4.39	□□□□□ -1.71
ATG2	YNL242W	GFD1	Q04839	188 aa	Known RBP	4.39	□□□□□ -1.71
ATG2	YNL242W	RPO21	P04050	1733 aa	Known RBP	4.39	□□□□□ -1.71
ATG2	YNL242W	ARG1	P22768	420 aa		4.39	□□□□□ -1.71
ATG2	YNL242W	CDC3	P32457	520 aa	Known RBP	4.39	□□□□□ -1.71
ATG2	YNL242W	YKR018C	P36114	725 aa		4.39	□□□□□ -1.71
ATG2	YNL242W	YKR023W	P36119	530 aa	Known RBP	4.39	□□□□□ -1.71
ATG2	YNL242W	PSY4	P38193	441 aa		4.39	□□□□□ -1.71
ATG2	YNL242W	SPO22	P40511	975 aa		4.39	□□□□□ -1.71
ATG2	YNL242W	ZPR1	P53303	486 aa	Known RBP	4.39	□□□□□ -1.71
ATG2	YNL242W	YLR001C	Q07895	862 aa		4.39	□□□□□ -1.71
ATG2	YNL242W	PRP16	P15938	1071 aa	Predicted RBP	4.38	□□□□□ -1.71
ATG2	YNL242W	KTR1	P27810	393 aa	Known RBP	4.38	□□□□□ -1.71
ATG2	YNL242W	HUL4	P40985	892 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	SEC5	P89102	971 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	YLR287C	Q05881	355 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	CMS1	Q07897	291 aa	Known RBP	4.38	□□□□□ -1.71
ATG2	YNL242W	SSA1	P10591	642 aa	Known RBP	4.38	□□□□□ -1.71
ATG2	YNL242W	TOA1	P32773	286 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	SMF1	P38925	575 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	DAS1	P47005	663 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	STR2	P47164	639 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	BTN2	P53286	410 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	ALO1	P54783	526 aa	Known RBP	4.38	□□□□□ -1.71
ATG2	YNL242W	PSR2	Q07949	397 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	BCK1	Q01389	1478 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	CDC8	P00572	216 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	YHL017W	P38745	532 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	ILM1	P47155	203 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	MRD1	Q06106	887 aa	Known RBP	4.38	□□□□□ -1.71
ATG2	YNL242W	NUP192	P47054	1683 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	SEC66	P33754	206 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	ADE17	P38009	592 aa	Known RBP	4.38	□□□□□ -1.71
ATG2	YNL242W	YER156C	P40093	338 aa	Known RBP	4.38	□□□□□ -1.71
ATG2	YNL242W	RPN11	P43588	306 aa	Known RBP	4.38	□□□□□ -1.71
ATG2	YNL242W	YNL144C	P53907	740 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	GIR2	Q03768	265 aa	Predicted RBP	4.38	□□□□□ -1.71
ATG2	YNL242W	CSR1	Q06705	408 aa	Known RBP	4.38	□□□□□ -1.71
ATG2	YNL242W	VAC14	Q06708	880 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	RTP1	Q12751	981 aa		4.38	□□□□□ -1.71
ATG2	YNL242W	DAL7	P21826	554 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	CPS1	P27614	576 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	ATG3	P40344	310 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	UBX2	Q04228	584 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	CSC1	Q06538	782 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	GCD2	P12754	651 aa	Predicted RBP	4.37	□□□□□ -1.71
ATG2	YNL242W	KRS1	P15180	591 aa	Known RBP	4.37	□□□□□ -1.71
ATG2	YNL242W	CLB4	P24871	460 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	MCM4	P30665	933 aa	Known RBP	4.37	□□□□□ -1.71
ATG2	YNL242W	YJR079W	P47126	109 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	YOL057W	Q08225	711 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	PTH2	P34222	208 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	PTC4	P38089	393 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	MPH1	P40562	993 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	SEC27	P41811	889 aa	Known RBP	4.37	□□□□□ -1.71
ATG2	YNL242W	CHC1	P22137	1653 aa	Known RBP	4.37	□□□□□ -1.71
ATG2	YNL242W	RPS6A	P0CX37	236 aa	Known RBP	4.37	□□□□□ -1.71
ATG2	YNL242W	RPS6B	P0CX38	236 aa	Predicted RBP	4.37	□□□□□ -1.71
ATG2	YNL242W	MRPS28	P21771	286 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	BUD14	P27637	709 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	SRB4	P32569	687 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	NFU1	P32860	256 aa		4.37	□□□□□ -1.71
ATG2	YNL242W	MUD2	P36084	527 aa	Known RBP	4.37	□□□□□ -1.71
ATG2	YNL242W	MCM1	P11746	286 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	GCD6	P32501	712 aa	Known RBP	4.36	□□□□□ -1.71
ATG2	YNL242W	SSE1	P32589	693 aa	Known RBP	4.36	□□□□□ -1.71
ATG2	YNL242W	YEL043W	P32618	956 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	NPL6	P32832	435 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
ATG2	YNL242W	YLH47	Q06493	454 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	NDL1	Q06568	189 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	YPL150W	Q12152	901 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	PRP4	P20053	465 aa	Known RBP	4.36	□□□□□ -1.71
ATG2	YNL242W	MSM1	P22438	575 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	CDC11	P32458	415 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	ESF2	P53743	316 aa	Known RBP	4.36	□□□□□ -1.71
ATG2	YNL242W	STE23	Q06010	1027 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	ALE1	Q08548	619 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	EXO84	P38261	753 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	LEM3	P42838	414 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	DSL1	P53847	754 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	STE11	P23561	717 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	INA22	P40576	216 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	YRB1	P41920	201 aa	Known RBP	4.36	□□□□□ -1.71
ATG2	YNL242W	JJJ2	P46997	583 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	YMR114C	Q04471	368 aa	Known RBP	4.36	□□□□□ -1.71
ATG2	YNL242W	GLE1	Q12315	538 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	NBL1	Q3E7Y6	73 aa		4.36	□□□□□ -1.71
ATG2	YNL242W	SQT1	P35184	431 aa		4.35	□□□□□ -1.71
ATG2	YNL242W	GTR1	Q00582	310 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms