RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C MMM1P41800 426 aa4.06□□□□□ -1.76
SSN8YNL025C ATG1P53104 897 aa4.06□□□□□ -1.76
SSN8YNL025C MSH6Q03834 1242 aa4.06□□□□□ -1.76
SSN8YNL025C FPR4Q06205 392 aaPredicted RBP4.06□□□□□ -1.76
SSN8YNL025C HTS1P07263 546 aaKnown RBP4.05□□□□□ -1.76
SSN8YNL025C NPR1P22211 790 aa4.05□□□□□ -1.76
SSN8YNL025C CDC3P32457 520 aaKnown RBP4.05□□□□□ -1.76
SSN8YNL025C SPC42P36094 363 aa4.05□□□□□ -1.76
SSN8YNL025C NAB3P38996 802 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76not detected
SSN8YNL025C OSW7P43611 510 aa4.05□□□□□ -1.76
SSN8YNL025C SAP155P43612 1002 aa4.05□□□□□ -1.76
SSN8YNL025C CIT3P43635 486 aa4.05□□□□□ -1.76
SSN8YNL025C MEC3Q02574 474 aa4.05□□□□□ -1.76
SSN8YNL025C NSI1Q12457 570 aa4.05□□□□□ -1.76
SSN8YNL025C CMR1Q12510 522 aaKnown RBP4.05□□□□□ -1.76
SSN8YNL025C COBP00163 385 aa4.04□□□□□ -1.76
SSN8YNL025C ECM2P38241 364 aaKnown RBP4.04□□□□□ -1.76
SSN8YNL025C GLO3P38682 493 aaKnown RBP4.04□□□□□ -1.76
SSN8YNL025C QDR1P40475 563 aa4.04□□□□□ -1.76
SSN8YNL025C ECL1P48235 211 aa4.04□□□□□ -1.76
SSN8YNL025C YAF9P53930 226 aa4.04□□□□□ -1.76
SSN8YNL025C KAR5Q04746 504 aa4.04□□□□□ -1.76
SSN8YNL025C YMR074CQ04773 145 aa4.04□□□□□ -1.76
SSN8YNL025C ESC8Q08119 714 aa4.04□□□□□ -1.76
SSN8YNL025C LRG1P35688 1017 aa4.03□□□□□ -1.76
SSN8YNL025C GPT2P36148 743 aa4.03□□□□□ -1.76
SSN8YNL025C ARL1P38116 183 aaKnown RBP4.03□□□□□ -1.76
SSN8YNL025C NMD2P38798 1089 aaKnown RBP4.03□□□□□ -1.76
SSN8YNL025C PRP43P53131 767 aaKnown RBP4.03□□□□□ -1.76
SSN8YNL025C YNL011CP53980 444 aa4.03□□□□□ -1.76
SSN8YNL025C DOT1Q04089 582 aaKnown RBP4.03□□□□□ -1.76
SSN8YNL025C TRS120Q04183 1289 aa4.03□□□□□ -1.76
SSN8YNL025C GCD1P09032 578 aaPredicted RBP4.02□□□□□ -1.77
SSN8YNL025C RCM1P53972 490 aa4.02□□□□□ -1.77
SSN8YNL025C CDC55Q00362 526 aa4.02□□□□□ -1.77
SSN8YNL025C GIN4Q12263 1142 aa4.02□□□□□ -1.77
SSN8YNL025C FLP1P03870 423 aa4.01□□□□□ -1.77
SSN8YNL025C DUR3P33413 735 aa4.01□□□□□ -1.77
SSN8YNL025C POL12P38121 705 aaPredicted RBP4.01□□□□□ -1.77
SSN8YNL025C SEA4P38164 1038 aa4.01□□□□□ -1.77
SSN8YNL025C OCA5P38738 679 aa4.01□□□□□ -1.77
SSN8YNL025C NNF1P47149 201 aa4.01□□□□□ -1.77
SSN8YNL025C ALT1P52893 592 aa4.01□□□□□ -1.77
SSN8YNL025C UTP22P53254 1237 aaPredicted RBP4.01□□□□□ -1.77
SSN8YNL025C ORC3P54790 616 aa4.01□□□□□ -1.77
SSN8YNL025C BSC2Q05611 235 aa4.01□□□□□ -1.77
SSN8YNL025C PMT7Q06644 662 aa4.01□□□□□ -1.77
SSN8YNL025C MNL2Q12205 849 aa4.01□□□□□ -1.77
SSN8YNL025C TRL1P09880 827 aaKnown RBP4□□□□□ -1.77
SSN8YNL025C SWE1P32944 819 aa4□□□□□ -1.77
SSN8YNL025C WHI3P34761 661 aaKnown RBP4□□□□□ -1.77
SSN8YNL025C SDH1Q00711 640 aa4□□□□□ -1.77
SSN8YNL025C DFG16Q99234 619 aa4□□□□□ -1.77
SSN8YNL025C RPS4AP0CX35 261 aaKnown RBP3.99□□□□□ -1.77
SSN8YNL025C RPS4BP0CX36 261 aaKnown RBP3.99□□□□□ -1.77
SSN8YNL025C REI1P38344 393 aaPredicted RBP3.99□□□□□ -1.77
SSN8YNL025C SSF1P38789 453 aaPredicted RBP3.99□□□□□ -1.77
SSN8YNL025C GIP4P39732 760 aa3.99□□□□□ -1.77
SSN8YNL025C OYE3P41816 400 aaPredicted RBP3.99□□□□□ -1.77
SSN8YNL025C NUT1P53114 1132 aa3.99□□□□□ -1.77
SSN8YNL025C SVF1Q05515 481 aa3.99□□□□□ -1.77
SSN8YNL025C RRP14P36080 434 aaKnown RBP3.98□□□□□ -1.77
SSN8YNL025C YHL008CP38750 627 aa3.98□□□□□ -1.77
SSN8YNL025C RVS167P39743 482 aaKnown RBP3.98□□□□□ -1.77
SSN8YNL025C MSH4P40965 878 aaPredicted RBP3.98□□□□□ -1.77
SSN8YNL025C NOP2P40991 618 aaKnown RBP3.98□□□□□ -1.77
SSN8YNL025C TAF1P46677 1066 aa3.98□□□□□ -1.77
SSN8YNL025C ATG36P46983 293 aa3.98□□□□□ -1.77
SSN8YNL025C SEN54Q02825 467 aaPredicted RBP3.98□□□□□ -1.77
SSN8YNL025C GAS1P22146 559 aaKnown RBP3.97□□□□□ -1.77
SSN8YNL025C ADP1P25371 1049 aa3.97□□□□□ -1.77
SSN8YNL025C SEC20P28791 383 aa3.97□□□□□ -1.77
SSN8YNL025C SMY2P32909 740 aaKnown RBP3.97□□□□□ -1.77
SSN8YNL025C NNK1P36003 928 aa3.97□□□□□ -1.77
SSN8YNL025C STM1P39015 273 aaKnown RBP3.97□□□□□ -1.77
SSN8YNL025C YJR008WP47085 338 aa3.97□□□□□ -1.77
SSN8YNL025C HSP78P33416 811 aa3.96□□□□□ -1.78
SSN8YNL025C TOM20P35180 183 aa3.96□□□□□ -1.78
SSN8YNL025C SHU2P38957 223 aa3.96□□□□□ -1.78
SSN8YNL025C TRE1Q08919 783 aa3.96□□□□□ -1.78
SSN8YNL025C YVC1Q12324 675 aa3.96□□□□□ -1.78
SSN8YNL025C TSA1P34760 196 aaKnown RBP3.95□□□□□ -1.78
SSN8YNL025C FPR3P38911 411 aaKnown RBP3.95□□□□□ -1.78
SSN8YNL025C PEX7P39108 375 aa3.95□□□□□ -1.78
SSN8YNL025C YGR045CP53229 120 aa3.95□□□□□ -1.78
SSN8YNL025C HAT1Q12341 374 aa3.95□□□□□ -1.78
SSN8YNL025C NFS1P25374 497 aa3.94□□□□□ -1.78
SSN8YNL025C YKL077WP36081 392 aa3.94□□□□□ -1.78
SSN8YNL025C MDJ2P42834 146 aa3.94□□□□□ -1.78
SSN8YNL025C SAM37P50110 327 aa3.94□□□□□ -1.78
SSN8YNL025C NOG1Q02892 647 aaKnown RBP3.94□□□□□ -1.78
SSN8YNL025C AVO1Q08236 1176 aa3.94□□□□□ -1.78
SSN8YNL025C TY1A-LR4P0C2I8 440 aaKnown RBP3.93□□□□□ -1.78
SSN8YNL025C TY1A-DR6P0CX70 440 aa3.93□□□□□ -1.78
SSN8YNL025C TY1A-ER1P0CX71 440 aa3.93□□□□□ -1.78
SSN8YNL025C TY1A-LR2P0CX72 440 aa3.93□□□□□ -1.78
SSN8YNL025C TY1A-PLP0CX73 440 aa3.93□□□□□ -1.78
SSN8YNL025C TY1A-JR1P0CX74 440 aa3.93□□□□□ -1.78
SSN8YNL025C TY1A-LR3P0CX75 440 aa3.93□□□□□ -1.78
SSN8YNL025C TY1A-ML2P0CX76 440 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms