RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C ARP5P53946 755 aa13.12□□□□□ -0.31
LCB1YMR296C CPA2P03965 1118 aaKnown RBP13.12□□□□□ -0.31
LCB1YMR296C RSC30P38781 883 aa13.12□□□□□ -0.31
LCB1YMR296C VID27P40157 782 aa13.12□□□□□ -0.31
LCB1YMR296C RAD61Q99359 647 aa13.12□□□□□ -0.31
LCB1YMR296C SRM1P21827 482 aa13.11□□□□□ -0.31
LCB1YMR296C RRP8P38961 392 aaKnown RBP13.11□□□□□ -0.31
LCB1YMR296C PIL1P53252 339 aaKnown RBP13.11□□□□□ -0.31
LCB1YMR296C JIP4Q03361 876 aa13.11□□□□□ -0.31
LCB1YMR296C MRD1Q06106 887 aaKnown RBP13.11□□□□□ -0.31
LCB1YMR296C LAP2Q10740 671 aa13.11□□□□□ -0.31
LCB1YMR296C ASH1P34233 588 aa13.1□□□□□ -0.31
LCB1YMR296C OCT1P35999 772 aa13.1□□□□□ -0.31
LCB1YMR296C TIF4631P39935 952 aaKnown RBP13.1□□□□□ -0.31
LCB1YMR296C PEX14P53112 341 aa13.1□□□□□ -0.31
LCB1YMR296C YDJ1P25491 409 aaKnown RBP13.09□□□□□ -0.31
LCB1YMR296C RPS15Q01855 142 aaKnown RBP13.09□□□□□ -0.31
LCB1YMR296C SKG3Q06315 1026 aa13.09□□□□□ -0.31
LCB1YMR296C FBP1P09201 348 aa13.08□□□□□ -0.31
LCB1YMR296C FRS2P15625 503 aaKnown RBP13.08□□□□□ -0.31
LCB1YMR296C IMP2'P32351 346 aa13.08□□□□□ -0.31
LCB1YMR296C TTI1P36097 1038 aa13.08□□□□□ -0.31
LCB1YMR296C ELG1Q12050 791 aa13.08□□□□□ -0.31
LCB1YMR296C KRS1P15180 591 aaKnown RBP13.08□□□□□ -0.32
LCB1YMR296C PEP3P27801 918 aa13.08□□□□□ -0.32
LCB1YMR296C YPL150WQ12152 901 aa13.08□□□□□ -0.32
LCB1YMR296C FBP26P32604 452 aa13.07□□□□□ -0.32
LCB1YMR296C ELM1P32801 640 aa13.07□□□□□ -0.32
LCB1YMR296C CCT5P40413 562 aaKnown RBP13.07□□□□□ -0.32
LCB1YMR296C NET1P47035 1189 aa13.07□□□□□ -0.32
LCB1YMR296C UFD2P54860 961 aa13.07□□□□□ -0.32
LCB1YMR296C MATALPHA2P0CY08 210 aa13.06□□□□□ -0.32
LCB1YMR296C HMLALPHA2P0CY09 210 aa13.06□□□□□ -0.32
LCB1YMR296C CHS3P29465 1165 aa13.06□□□□□ -0.32
LCB1YMR296C NCS6P53088 359 aa13.06□□□□□ -0.32
LCB1YMR296C ECM23Q02710 187 aa13.06□□□□□ -0.32
LCB1YMR296C SSF2Q12153 453 aaPredicted RBP13.06□□□□□ -0.32
LCB1YMR296C RDS1P25611 832 aa13.05□□□□□ -0.32
LCB1YMR296C PRO3P32263 286 aaKnown RBP13.05□□□□□ -0.32
LCB1YMR296C SKI2P35207 1287 aaKnown RBP RIP-Chip data13.05□□□□□ -0.32not detected
LCB1YMR296C ESF1Q06344 628 aaKnown RBP13.05□□□□□ -0.32
LCB1YMR296C PSK2Q08217 1101 aa13.05□□□□□ -0.32
LCB1YMR296C IXR1P33417 597 aa13.05□□□□□ -0.32
LCB1YMR296C MYO3P36006 1272 aa13.05□□□□□ -0.32
LCB1YMR296C YHL017WP38745 532 aa13.05□□□□□ -0.32
LCB1YMR296C LYS14P40971 790 aa13.05□□□□□ -0.32
LCB1YMR296C SPR3P41901 512 aa13.05□□□□□ -0.32
LCB1YMR296C YKE2P52553 114 aa13.05□□□□□ -0.32
LCB1YMR296C SUB2Q07478 446 aaKnown RBP13.05□□□□□ -0.32
LCB1YMR296C SPB4P25808 606 aaPredicted RBP13.04□□□□□ -0.32
LCB1YMR296C YJL007CP47080 104 aa13.04□□□□□ -0.32
LCB1YMR296C ERG12P07277 443 aa13.03□□□□□ -0.32
LCB1YMR296C MAL33P38157 468 aa13.03□□□□□ -0.32
LCB1YMR296C VPS8P39702 1274 aa13.03□□□□□ -0.32
LCB1YMR296C MCM2P29469 868 aa13.02□□□□□ -0.32
LCB1YMR296C ANP1P32629 500 aa13.02□□□□□ -0.32
LCB1YMR296C ERG7P38604 731 aa13.02□□□□□ -0.32
LCB1YMR296C VAB2P40003 282 aa13.02□□□□□ -0.32
LCB1YMR296C HDA1P53973 706 aa13.02□□□□□ -0.32
LCB1YMR296C CTR9P89105 1077 aa13.02□□□□□ -0.32
LCB1YMR296C SSL2Q00578 843 aa13.02□□□□□ -0.32
LCB1YMR296C YLR407WQ06070 228 aa13.02□□□□□ -0.32
LCB1YMR296C TUS1Q06412 1307 aa13.02□□□□□ -0.32
LCB1YMR296C ACE2P21192 770 aa13.02□□□□□ -0.33
LCB1YMR296C MCD4P36051 919 aa13.02□□□□□ -0.33
LCB1YMR296C CRG1P38892 291 aaRIP-Chip data13.02□□□□□ -0.33not detected
LCB1YMR296C YLR225CQ05948 407 aaKnown RBP13.02□□□□□ -0.33
LCB1YMR296C SPN1Q06505 410 aaPredicted RBP13.02□□□□□ -0.33
LCB1YMR296C CFT2Q12102 859 aaPredicted RBP13.02□□□□□ -0.33
LCB1YMR296C TRS33Q99394 268 aa13.02□□□□□ -0.33
LCB1YMR296C SAM2P19358 384 aaKnown RBP13.01□□□□□ -0.33
LCB1YMR296C RIT1P23796 513 aa13.01□□□□□ -0.33
LCB1YMR296C RFC5P38251 354 aa13.01□□□□□ -0.33
LCB1YMR296C NPR3P38742 1146 aa13.01□□□□□ -0.33
LCB1YMR296C EPL1P43572 832 aa13.01□□□□□ -0.33
LCB1YMR296C PTK2P47116 818 aaKnown RBP13.01□□□□□ -0.33
LCB1YMR296C SGD1Q06132 899 aa13.01□□□□□ -0.33
LCB1YMR296C RER2P35196 286 aa13□□□□□ -0.33
LCB1YMR296C BUD6P41697 788 aa13□□□□□ -0.33
LCB1YMR296C YML037CQ03703 340 aa13□□□□□ -0.33
LCB1YMR296C UBX5Q06682 500 aa13□□□□□ -0.33
LCB1YMR296C PER1P25625 357 aa12.99□□□□□ -0.33
LCB1YMR296C MIC60P36112 540 aa12.99□□□□□ -0.33
LCB1YMR296C DDP1Q99321 188 aaKnown RBP12.99□□□□□ -0.33
LCB1YMR296C MRPL10P36520 322 aa12.98□□□□□ -0.33
LCB1YMR296C CDC60P26637 1090 aaKnown RBP12.97□□□□□ -0.33
LCB1YMR296C UBP9P39967 754 aa12.96□□□□□ -0.33
LCB1YMR296C SOL4P53315 255 aa12.96□□□□□ -0.33
LCB1YMR296C ETT1Q08421 412 aaKnown RBP12.96□□□□□ -0.33
LCB1YMR296C FOL1P53848 824 aa12.96□□□□□ -0.34
LCB1YMR296C ATE1P16639 503 aa12.95□□□□□ -0.34
LCB1YMR296C RPT6Q01939 405 aaKnown RBP12.95□□□□□ -0.34
LCB1YMR296C VPS30Q02948 557 aa12.95□□□□□ -0.34
LCB1YMR296C MYO5Q04439 1219 aaKnown RBP12.95□□□□□ -0.34
LCB1YMR296C EST2Q06163 884 aa12.95□□□□□ -0.34
LCB1YMR296C GPA1P08539 472 aa12.94□□□□□ -0.34
LCB1YMR296C MAK31P23059 88 aa12.94□□□□□ -0.34
LCB1YMR296C PES4P39684 611 aa12.94□□□□□ -0.34
LCB1YMR296C YER130CP39959 443 aa12.94□□□□□ -0.34
LCB1YMR296C CSM2P40465 213 aa12.94□□□□□ -0.34
Retrieved 100 of 5,963 RNA–protein pairs in 700.6 ms