RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	RXT2	P38255	430 aa		13.48	□□□□□ -0.25
CUE1	YMR264W	MYO5	Q04439	1219 aa	Known RBP	13.48	□□□□□ -0.25
CUE1	YMR264W	VPS1	P21576	704 aa	Known RBP	13.47	□□□□□ -0.25
CUE1	YMR264W	RPS7A	P26786	190 aa	Known RBP	13.47	□□□□□ -0.25
CUE1	YMR264W	ICL1	P28240	557 aa	Predicted RBP	13.47	□□□□□ -0.25
CUE1	YMR264W	PRO3	P32263	286 aa	Known RBP	13.47	□□□□□ -0.25
CUE1	YMR264W	ASF1	P32447	279 aa		13.47	□□□□□ -0.25
CUE1	YMR264W	ACK1	Q07622	623 aa	Predicted RBP	13.47	□□□□□ -0.25
CUE1	YMR264W	KEL3	Q08979	651 aa	Predicted RBP	13.47	□□□□□ -0.25
CUE1	YMR264W	RRG1	Q12167	365 aa	Predicted RBP	13.47	□□□□□ -0.25
CUE1	YMR264W	SES1	P07284	462 aa	Known RBP	13.46	□□□□□ -0.25
CUE1	YMR264W	MCM4	P30665	933 aa	Known RBP	13.46	□□□□□ -0.25
CUE1	YMR264W	MPE1	P35728	441 aa	Known RBP	13.46	□□□□□ -0.25
CUE1	YMR264W	KIN4	Q01919	800 aa		13.46	□□□□□ -0.25
CUE1	YMR264W	CSC1	Q06538	782 aa		13.46	□□□□□ -0.25
CUE1	YMR264W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.46	□□□□□ -0.25	not detected
CUE1	YMR264W	GSC2	P40989	1895 aa		13.46	□□□□□ -0.26
CUE1	YMR264W	VPS8	P39702	1274 aa		13.45	□□□□□ -0.26
CUE1	YMR264W	PCI8	P40512	444 aa		13.45	□□□□□ -0.26
CUE1	YMR264W	RPT6	Q01939	405 aa	Known RBP	13.45	□□□□□ -0.26
CUE1	YMR264W	DPL1	Q05567	589 aa		13.45	□□□□□ -0.26
CUE1	YMR264W	GSY2	P27472	705 aa		13.44	□□□□□ -0.26
CUE1	YMR264W	URA1	P28272	314 aa	Predicted RBP	13.44	□□□□□ -0.26
CUE1	YMR264W	SRP40	P32583	406 aa	Predicted RBP	13.44	□□□□□ -0.26
CUE1	YMR264W	FYV10	P40492	516 aa		13.44	□□□□□ -0.26
CUE1	YMR264W	CTR9	P89105	1077 aa		13.44	□□□□□ -0.26
CUE1	YMR264W	NBL1	Q3E7Y6	73 aa		13.44	□□□□□ -0.26
CUE1	YMR264W	FLO11	P08640	1367 aa		13.44	□□□□□ -0.26
CUE1	YMR264W	MET6	P05694	767 aa	Known RBP	13.43	□□□□□ -0.26
CUE1	YMR264W	EBP2	P36049	427 aa	Known RBP	13.43	□□□□□ -0.26
CUE1	YMR264W	YER156C	P40093	338 aa	Known RBP	13.43	□□□□□ -0.26
CUE1	YMR264W	NAF1	P53919	492 aa	Known RBP	13.43	□□□□□ -0.26
CUE1	YMR264W	YDR341C	Q05506	607 aa	Known RBP	13.43	□□□□□ -0.26
CUE1	YMR264W	CEX1	Q12453	761 aa		13.43	□□□□□ -0.26
CUE1	YMR264W	MNN4	P36044	1178 aa		13.42	□□□□□ -0.26
CUE1	YMR264W	NOC2	P39744	710 aa	Known RBP	13.42	□□□□□ -0.26
CUE1	YMR264W	MYO1	P08964	1928 aa		13.42	□□□□□ -0.26
CUE1	YMR264W	RPL22A	P05749	121 aa	Known RBP	13.41	□□□□□ -0.26
CUE1	YMR264W	AFG2	P32794	780 aa		13.41	□□□□□ -0.26
CUE1	YMR264W	CUE3	P53137	624 aa	Known RBP	13.41	□□□□□ -0.26
CUE1	YMR264W	CIT1	P00890	479 aa		13.4	□□□□□ -0.26
CUE1	YMR264W	CYC8	P14922	966 aa		13.4	□□□□□ -0.26
CUE1	YMR264W	RPL8B	P29453	256 aa	Known RBP	13.4	□□□□□ -0.26
CUE1	YMR264W	CLF1	Q12309	687 aa	Predicted RBP	13.4	□□□□□ -0.26
CUE1	YMR264W	TOP1	P04786	769 aa		13.39	□□□□□ -0.27
CUE1	YMR264W	MCM3	P24279	971 aa	Known RBP	13.39	□□□□□ -0.27
CUE1	YMR264W	TIM50	Q02776	476 aa		13.39	□□□□□ -0.27
CUE1	YMR264W	GIS4	Q04233	774 aa		13.39	□□□□□ -0.27
CUE1	YMR264W	EIS1	Q05050	843 aa	Known RBP	13.39	□□□□□ -0.27
CUE1	YMR264W	PCL8	Q08966	492 aa		13.39	□□□□□ -0.27
CUE1	YMR264W	DIP2	Q12220	943 aa	Predicted RBP	13.39	□□□□□ -0.27
CUE1	YMR264W	PTC5	Q12511	572 aa		13.39	□□□□□ -0.27
CUE1	YMR264W	ACE2	P21192	770 aa		13.38	□□□□□ -0.27
CUE1	YMR264W	TOM71	P38825	639 aa	Known RBP	13.38	□□□□□ -0.27
CUE1	YMR264W	YGL138C	P53122	345 aa		13.38	□□□□□ -0.27
CUE1	YMR264W	TIP41	Q12199	356 aa		13.38	□□□□□ -0.27
CUE1	YMR264W	TFC8	Q12308	588 aa		13.38	□□□□□ -0.27
CUE1	YMR264W	STI1	P15705	589 aa	Known RBP RIP-Chip data	13.37	□□□□□ -0.27	not detected
CUE1	YMR264W	PRE8	P23639	250 aa		13.37	□□□□□ -0.27
CUE1	YMR264W	BMH1	P29311	267 aa	Known RBP	13.37	□□□□□ -0.27
CUE1	YMR264W	SAC6	P32599	642 aa	Known RBP	13.37	□□□□□ -0.27
CUE1	YMR264W	TFG2	P41896	400 aa	Predicted RBP	13.37	□□□□□ -0.27
CUE1	YMR264W	WAR1	Q03631	944 aa		13.37	□□□□□ -0.27
CUE1	YMR264W	MMR1	Q06324	491 aa		13.37	□□□□□ -0.27
CUE1	YMR264W	ESC2	Q06340	456 aa		13.37	□□□□□ -0.27
CUE1	YMR264W	YOR296W	Q08748	1289 aa		13.37	□□□□□ -0.27
CUE1	YMR264W	SHC1	P39000	512 aa		13.36	□□□□□ -0.27
CUE1	YMR264W	FOL1	P53848	824 aa		13.36	□□□□□ -0.27
CUE1	YMR264W	SEN54	Q02825	467 aa	Predicted RBP	13.36	□□□□□ -0.27
CUE1	YMR264W	VPS30	Q02948	557 aa		13.36	□□□□□ -0.27
CUE1	YMR264W	DSE3	Q08729	430 aa		13.36	□□□□□ -0.27
CUE1	YMR264W	ALG1	P16661	449 aa		13.35	□□□□□ -0.27
CUE1	YMR264W	SRP54	P20424	541 aa	Known RBP	13.35	□□□□□ -0.27
CUE1	YMR264W	MAK11	P20484	414 aa	Known RBP	13.35	□□□□□ -0.27
CUE1	YMR264W	SRM1	P21827	482 aa		13.35	□□□□□ -0.27
CUE1	YMR264W	RTC4	P53850	401 aa		13.35	□□□□□ -0.27
CUE1	YMR264W	CRF1	Q04930	467 aa		13.35	□□□□□ -0.27
CUE1	YMR264W	CHS3	P29465	1165 aa		13.34	□□□□□ -0.27
CUE1	YMR264W	PES4	P39684	611 aa		13.34	□□□□□ -0.27
CUE1	YMR264W	YJL171C	P46992	396 aa		13.34	□□□□□ -0.27
CUE1	YMR264W	MDM1	Q01846	1127 aa		13.34	□□□□□ -0.27
CUE1	YMR264W	SKG3	Q06315	1026 aa		13.34	□□□□□ -0.27
CUE1	YMR264W	HIS4	P00815	799 aa	Known RBP	13.33	□□□□□ -0.28
CUE1	YMR264W	RPS9B	P05755	195 aa	Known RBP	13.33	□□□□□ -0.28
CUE1	YMR264W	NUC1	P08466	329 aa		13.33	□□□□□ -0.28
CUE1	YMR264W	PSY4	P38193	441 aa		13.33	□□□□□ -0.28
CUE1	YMR264W	SMD2	Q06217	110 aa	Known RBP	13.33	□□□□□ -0.28
CUE1	YMR264W	YDL124W	Q07551	312 aa	Known RBP	13.33	□□□□□ -0.28
CUE1	YMR264W	THR4	P16120	514 aa	Known RBP	13.32	□□□□□ -0.28
CUE1	YMR264W	CDC15	P27636	974 aa		13.32	□□□□□ -0.28
CUE1	YMR264W	CCT3	P39077	534 aa	Known RBP	13.32	□□□□□ -0.28
CUE1	YMR264W	MFT1	P33441	392 aa	Known RBP	13.31	□□□□□ -0.28
CUE1	YMR264W	LYS14	P40971	790 aa		13.31	□□□□□ -0.28
CUE1	YMR264W	STU2	P46675	888 aa		13.31	□□□□□ -0.28
CUE1	YMR264W	HCR1	Q05775	265 aa	Known RBP	13.31	□□□□□ -0.28
CUE1	YMR264W	PSR2	Q07949	397 aa		13.31	□□□□□ -0.28
CUE1	YMR264W	AFT2	Q08957	416 aa		13.31	□□□□□ -0.28
CUE1	YMR264W	MSM1	P22438	575 aa		13.3	□□□□□ -0.28
CUE1	YMR264W	ADP1	P25371	1049 aa		13.3	□□□□□ -0.28
CUE1	YMR264W	SPB4	P25808	606 aa	Predicted RBP	13.3	□□□□□ -0.28

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms