RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W RVS167P39743 482 aaKnown RBP6.8□□□□□ -1.32
CSM3YMR048W YAF9P53930 226 aa6.8□□□□□ -1.32
CSM3YMR048W DOT1Q04089 582 aaKnown RBP6.8□□□□□ -1.32
CSM3YMR048W GPI13Q07830 1017 aa6.8□□□□□ -1.32
CSM3YMR048W NOC3Q07896 663 aaPredicted RBP6.8□□□□□ -1.32
CSM3YMR048W ARL1P38116 183 aaKnown RBP6.79□□□□□ -1.32
CSM3YMR048W MMM1P41800 426 aa6.79□□□□□ -1.32
CSM3YMR048W CIT3P43635 486 aa6.78□□□□□ -1.32
CSM3YMR048W YOR059CQ08448 450 aaKnown RBP6.78□□□□□ -1.32
CSM3YMR048W MCM5P29496 775 aaKnown RBP6.77□□□□□ -1.33
CSM3YMR048W REI1P38344 393 aaPredicted RBP6.77□□□□□ -1.33
CSM3YMR048W CIC1P38779 376 aaKnown RBP6.77□□□□□ -1.33
CSM3YMR048W NSI1Q12457 570 aa6.77□□□□□ -1.33
CSM3YMR048W YCS4Q06156 1176 aa6.76□□□□□ -1.33
CSM3YMR048W SHU2P38957 223 aa6.75□□□□□ -1.33
CSM3YMR048W IRC24P40580 263 aa6.75□□□□□ -1.33
CSM3YMR048W YKL077WP36081 392 aa6.74□□□□□ -1.33
CSM3YMR048W YHL050CP38721 697 aa6.74□□□□□ -1.33
CSM3YMR048W YHR219WP38900 624 aa6.74□□□□□ -1.33
CSM3YMR048W AVT1P47082 602 aa6.74□□□□□ -1.33
CSM3YMR048W MON1P53129 644 aa6.74□□□□□ -1.33
CSM3YMR048W RPS4AP0CX35 261 aaKnown RBP6.73□□□□□ -1.33
CSM3YMR048W RPS4BP0CX36 261 aaKnown RBP6.73□□□□□ -1.33
CSM3YMR048W WHI3P34761 661 aaKnown RBP6.73□□□□□ -1.33
CSM3YMR048W SSF1P38789 453 aaPredicted RBP6.73□□□□□ -1.33
CSM3YMR048W RCM1P53972 490 aa6.73□□□□□ -1.33
CSM3YMR048W GCD1P09032 578 aaPredicted RBP6.72□□□□□ -1.33
CSM3YMR048W TY1A-LR4P0C2I8 440 aaKnown RBP6.72□□□□□ -1.33
CSM3YMR048W TY1A-DR6P0CX70 440 aa6.72□□□□□ -1.33
CSM3YMR048W TY1A-ER1P0CX71 440 aa6.72□□□□□ -1.33
CSM3YMR048W TY1A-LR2P0CX72 440 aa6.72□□□□□ -1.33
CSM3YMR048W TY1A-PLP0CX73 440 aa6.72□□□□□ -1.33
CSM3YMR048W TY1A-JR1P0CX74 440 aa6.72□□□□□ -1.33
CSM3YMR048W TY1A-LR3P0CX75 440 aa6.72□□□□□ -1.33
CSM3YMR048W TY1A-ML2P0CX76 440 aa6.72□□□□□ -1.33
CSM3YMR048W GCD6P32501 712 aaKnown RBP6.72□□□□□ -1.33
CSM3YMR048W MSH4P40965 878 aaPredicted RBP6.72□□□□□ -1.33
CSM3YMR048W TY1A-GR1Q12085 440 aa6.72□□□□□ -1.33
CSM3YMR048W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.72□□□□□ -1.33
CSM3YMR048W TY1A-OLQ92392 440 aaKnown RBP6.72□□□□□ -1.33
CSM3YMR048W VPS35P34110 944 aa6.71□□□□□ -1.34
CSM3YMR048W STM1P39015 273 aaKnown RBP6.71□□□□□ -1.34
CSM3YMR048W ALT1P52893 592 aa6.71□□□□□ -1.34
CSM3YMR048W AVO1Q08236 1176 aa6.71□□□□□ -1.34
CSM3YMR048W ALG6Q12001 544 aaKnown RBP6.71□□□□□ -1.34
CSM3YMR048W NNK1P36003 928 aa6.7□□□□□ -1.34
CSM3YMR048W EXO5P38289 585 aa6.7□□□□□ -1.34
CSM3YMR048W PPX1P38698 397 aa6.7□□□□□ -1.34
CSM3YMR048W YGR045CP53229 120 aa6.7□□□□□ -1.34
CSM3YMR048W SDH1Q00711 640 aa6.7□□□□□ -1.34
CSM3YMR048W NOG1Q02892 647 aaKnown RBP6.7□□□□□ -1.34
CSM3YMR048W AOS1Q06624 347 aa6.7□□□□□ -1.34
CSM3YMR048W ELM1P32801 640 aa6.69□□□□□ -1.34
CSM3YMR048W SMY2P32909 740 aaKnown RBP6.69□□□□□ -1.34
CSM3YMR048W PHO4P07270 312 aaKnown RBP6.68□□□□□ -1.34
CSM3YMR048W KAR2P16474 682 aaKnown RBP6.68□□□□□ -1.34
CSM3YMR048W OYE3P41816 400 aaPredicted RBP6.68□□□□□ -1.34
CSM3YMR048W MSC6Q08818 692 aaKnown RBP6.68□□□□□ -1.34
CSM3YMR048W NFS1P25374 497 aa6.67□□□□□ -1.34
CSM3YMR048W ELA1P53861 379 aaPredicted RBP6.67□□□□□ -1.34
CSM3YMR048W PRP40P33203 583 aaKnown RBP6.66□□□□□ -1.34
CSM3YMR048W SEA4P38164 1038 aa6.66□□□□□ -1.34
CSM3YMR048W SLS1P42900 643 aa6.66□□□□□ -1.34
CSM3YMR048W MTR4P47047 1073 aaKnown RBP6.66□□□□□ -1.34
CSM3YMR048W ECL1P48235 211 aa6.66□□□□□ -1.34
CSM3YMR048W YVC1Q12324 675 aa6.66□□□□□ -1.34
CSM3YMR048W MET4P32389 672 aa6.65□□□□□ -1.34
CSM3YMR048W NEM1P38757 446 aa6.65□□□□□ -1.34
CSM3YMR048W ADP1P25371 1049 aa6.64□□□□□ -1.35
CSM3YMR048W EAR1Q03212 550 aa6.64□□□□□ -1.35
CSM3YMR048W OXR1Q08952 273 aa6.64□□□□□ -1.35
CSM3YMR048W VMA4P22203 233 aaKnown RBP6.63□□□□□ -1.35
CSM3YMR048W MSH3P25336 1018 aa6.63□□□□□ -1.35
CSM3YMR048W SEC20P28791 383 aa6.63□□□□□ -1.35
CSM3YMR048W POL12P38121 705 aaPredicted RBP6.63□□□□□ -1.35
CSM3YMR048W YAR028WP39548 234 aa6.63□□□□□ -1.35
CSM3YMR048W ORC3P54790 616 aa6.63□□□□□ -1.35
CSM3YMR048W DAL4Q04895 635 aa6.63□□□□□ -1.35
CSM3YMR048W TRE1Q08919 783 aa6.63□□□□□ -1.35
CSM3YMR048W DFG16Q99234 619 aa6.63□□□□□ -1.35
CSM3YMR048W LRG1P35688 1017 aa6.62□□□□□ -1.35
CSM3YMR048W DAK2P43550 591 aa6.62□□□□□ -1.35
CSM3YMR048W ULP1Q02724 621 aa6.62□□□□□ -1.35
CSM3YMR048W UTP5Q04177 643 aaKnown RBP6.62□□□□□ -1.35
CSM3YMR048W SQT1P35184 431 aa6.61□□□□□ -1.35
CSM3YMR048W HSE1P38753 452 aa6.61□□□□□ -1.35
CSM3YMR048W PEX7P39108 375 aa6.61□□□□□ -1.35
CSM3YMR048W RSM26P47141 266 aa6.61□□□□□ -1.35
CSM3YMR048W PEX13P80667 386 aa6.61□□□□□ -1.35
CSM3YMR048W HSP78P33416 811 aa6.6□□□□□ -1.35
CSM3YMR048W ATG14P38270 344 aa6.6□□□□□ -1.35
CSM3YMR048W NIT1P40447 199 aa6.6□□□□□ -1.35
CSM3YMR048W PUS7Q08647 676 aaKnown RBP6.6□□□□□ -1.35
CSM3YMR048W LAP2Q10740 671 aa6.6□□□□□ -1.35
CSM3YMR048W RET1P22276 1149 aaKnown RBP6.59□□□□□ -1.35
CSM3YMR048W SEG2P34250 1132 aa6.59□□□□□ -1.35
CSM3YMR048W THI12P42883 340 aa6.59□□□□□ -1.35
CSM3YMR048W THI5P43534 340 aa6.59□□□□□ -1.35
CSM3YMR048W THI11P47183 340 aa6.59□□□□□ -1.35
CSM3YMR048W SSY1Q03770 852 aa6.59□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms