RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C TY1A-OLQ92392 440 aaKnown RBP5.98□□□□□ -1.45
ATG38YLR211C STM1P39015 273 aaKnown RBP5.97□□□□□ -1.45
ATG38YLR211C GCV1P48015 400 aa5.97□□□□□ -1.45
ATG38YLR211C SAM37P50110 327 aa5.97□□□□□ -1.45
ATG38YLR211C YGR130CP53278 816 aa5.97□□□□□ -1.45
ATG38YLR211C YMR074CQ04773 145 aa5.97□□□□□ -1.45
ATG38YLR211C MCM5P29496 775 aaKnown RBP5.96□□□□□ -1.46
ATG38YLR211C UGA4P32837 571 aa5.96□□□□□ -1.46
ATG38YLR211C UTP22P53254 1237 aaPredicted RBP5.96□□□□□ -1.46
ATG38YLR211C MEC3Q02574 474 aa5.96□□□□□ -1.46
ATG38YLR211C SEN54Q02825 467 aaPredicted RBP5.96□□□□□ -1.46
ATG38YLR211C YCS4Q06156 1176 aa5.96□□□□□ -1.46
ATG38YLR211C YOR223WQ12015 292 aa5.96□□□□□ -1.46
ATG38YLR211C CHS2P14180 963 aa5.95□□□□□ -1.46
ATG38YLR211C GPT2P36148 743 aa5.95□□□□□ -1.46
ATG38YLR211C OMA1P36163 345 aa5.95□□□□□ -1.46
ATG38YLR211C IPL1P38991 367 aa5.95□□□□□ -1.46
ATG38YLR211C RVS167P39743 482 aaKnown RBP5.95□□□□□ -1.46
ATG38YLR211C GIC2Q06648 383 aa5.95□□□□□ -1.46
ATG38YLR211C MED7Q08278 222 aa5.95□□□□□ -1.46
ATG38YLR211C ALG6Q12001 544 aaKnown RBP5.95□□□□□ -1.46
ATG38YLR211C EXO5P38289 585 aa5.94□□□□□ -1.46
ATG38YLR211C DAK2P43550 591 aa5.94□□□□□ -1.46
ATG38YLR211C CTH1P47976 325 aa5.94□□□□□ -1.46
ATG38YLR211C DOT1Q04089 582 aaKnown RBP5.94□□□□□ -1.46
ATG38YLR211C MAC1P35192 417 aa5.93□□□□□ -1.46
ATG38YLR211C CIC1P38779 376 aaKnown RBP5.93□□□□□ -1.46
ATG38YLR211C SPO74P45819 413 aa5.93□□□□□ -1.46
ATG38YLR211C PRP40P33203 583 aaKnown RBP5.92□□□□□ -1.46
ATG38YLR211C VPS35P34110 944 aa5.92□□□□□ -1.46
ATG38YLR211C SEA4P38164 1038 aa5.92□□□□□ -1.46
ATG38YLR211C TOS1P38288 455 aa5.92□□□□□ -1.46
ATG38YLR211C REI1P38344 393 aaPredicted RBP5.92□□□□□ -1.46
ATG38YLR211C SLS1P42900 643 aa5.92□□□□□ -1.46
ATG38YLR211C NEM1P38757 446 aa5.91□□□□□ -1.46
ATG38YLR211C NOG1Q02892 647 aaKnown RBP5.91□□□□□ -1.46
ATG38YLR211C CYC7P00045 113 aa5.9□□□□□ -1.46
ATG38YLR211C MSB1P21339 1137 aaKnown RBP5.9□□□□□ -1.46
ATG38YLR211C PUB1P32588 453 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
ATG38YLR211C WHI3P34761 661 aaKnown RBP5.9□□□□□ -1.46
ATG38YLR211C THI12P42883 340 aa5.9□□□□□ -1.46
ATG38YLR211C THI5P43534 340 aa5.9□□□□□ -1.46
ATG38YLR211C THI11P47183 340 aa5.9□□□□□ -1.46
ATG38YLR211C YGR045CP53229 120 aa5.9□□□□□ -1.46
ATG38YLR211C EAR1Q03212 550 aa5.9□□□□□ -1.46
ATG38YLR211C DAL4Q04895 635 aa5.9□□□□□ -1.46
ATG38YLR211C THI13Q07748 340 aa5.9□□□□□ -1.46
ATG38YLR211C YLL054CQ12244 843 aa5.9□□□□□ -1.46
ATG38YLR211C GCD1P09032 578 aaPredicted RBP5.89□□□□□ -1.47
ATG38YLR211C GCD6P32501 712 aaKnown RBP5.89□□□□□ -1.47
ATG38YLR211C MSH4P40965 878 aaPredicted RBP5.89□□□□□ -1.47
ATG38YLR211C ULP1Q02724 621 aa5.89□□□□□ -1.47
ATG38YLR211C MAG2Q06436 670 aaKnown RBP5.89□□□□□ -1.47
ATG38YLR211C FAA3P39002 694 aa5.88□□□□□ -1.47
ATG38YLR211C BRE4Q07660 1125 aa5.88□□□□□ -1.47
ATG38YLR211C SEC20P28791 383 aa5.87□□□□□ -1.47
ATG38YLR211C ARL1P38116 183 aaKnown RBP5.87□□□□□ -1.47
ATG38YLR211C ELA1P53861 379 aaPredicted RBP5.87□□□□□ -1.47
ATG38YLR211C SDH1Q00711 640 aa5.87□□□□□ -1.47
ATG38YLR211C YML020WQ03722 664 aa5.87□□□□□ -1.47
ATG38YLR211C RPS4AP0CX35 261 aaKnown RBP5.86□□□□□ -1.47
ATG38YLR211C RPS4BP0CX36 261 aaKnown RBP5.86□□□□□ -1.47
ATG38YLR211C HEM13P11353 328 aaKnown RBP5.86□□□□□ -1.47
ATG38YLR211C MSH3P25336 1018 aa5.86□□□□□ -1.47
ATG38YLR211C RPT1P33299 467 aaKnown RBP5.86□□□□□ -1.47
ATG38YLR211C YKL077WP36081 392 aa5.86□□□□□ -1.47
ATG38YLR211C MMM1P41800 426 aa5.86□□□□□ -1.47
ATG38YLR211C ALT1P52893 592 aa5.86□□□□□ -1.47
ATG38YLR211C HXK1P04806 485 aaKnown RBP5.85□□□□□ -1.47
ATG38YLR211C LIP5P32875 414 aa5.85□□□□□ -1.47
ATG38YLR211C PEX13P80667 386 aa5.85□□□□□ -1.47
ATG38YLR211C YPL109CQ02981 657 aa5.85□□□□□ -1.47
ATG38YLR211C UTP5Q04177 643 aaKnown RBP5.85□□□□□ -1.47
ATG38YLR211C NOP8Q08287 484 aaPredicted RBP5.85□□□□□ -1.47
ATG38YLR211C OYE3P41816 400 aaPredicted RBP5.84□□□□□ -1.47
ATG38YLR211C CIT3P43635 486 aa5.84□□□□□ -1.47
ATG38YLR211C RDH54P38086 958 aa5.83□□□□□ -1.48
ATG38YLR211C PEX28P38848 579 aa5.83□□□□□ -1.48
ATG38YLR211C SHU2P38957 223 aa5.83□□□□□ -1.48
ATG38YLR211C PIC2P40035 300 aa5.83□□□□□ -1.48
ATG38YLR211C KAR2P16474 682 aaKnown RBP5.82□□□□□ -1.48
ATG38YLR211C ATE1P16639 503 aa5.82□□□□□ -1.48
ATG38YLR211C NFS1P25374 497 aa5.82□□□□□ -1.48
ATG38YLR211C SMY2P32909 740 aaKnown RBP5.82□□□□□ -1.48
ATG38YLR211C RSM26P47141 266 aa5.82□□□□□ -1.48
ATG38YLR211C RCM1P53972 490 aa5.82□□□□□ -1.48
ATG38YLR211C ADI1Q03677 179 aa5.82□□□□□ -1.48
ATG38YLR211C AVO1Q08236 1176 aa5.82□□□□□ -1.48
ATG38YLR211C OXR1Q08952 273 aa5.82□□□□□ -1.48
ATG38YLR211C XKS1P42826 600 aa5.81□□□□□ -1.48
ATG38YLR211C YGL140CP53120 1219 aa5.81□□□□□ -1.48
ATG38YLR211C RRP15Q06511 250 aaPredicted RBP5.81□□□□□ -1.48
ATG38YLR211C YVC1Q12324 675 aa5.81□□□□□ -1.48
ATG38YLR211C YAR028WP39548 234 aa5.8□□□□□ -1.48
ATG38YLR211C MTR4P47047 1073 aaKnown RBP5.8□□□□□ -1.48
ATG38YLR211C SQT1P35184 431 aa5.79□□□□□ -1.48
ATG38YLR211C NNK1P36003 928 aa5.79□□□□□ -1.48
ATG38YLR211C NMD3P38861 518 aaKnown RBP5.79□□□□□ -1.48
ATG38YLR211C PEX7P39108 375 aa5.79□□□□□ -1.48
ATG38YLR211C SEC23P15303 768 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms