RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C PMT7Q06644 662 aa5.97□□□□□ -1.45
NYV1YLR093C LRG1P35688 1017 aa5.96□□□□□ -1.46
NYV1YLR093C ARL1P38116 183 aaKnown RBP5.96□□□□□ -1.46
NYV1YLR093C NIT1P40447 199 aa5.96□□□□□ -1.46
NYV1YLR093C OYE3P41816 400 aaPredicted RBP5.96□□□□□ -1.46
NYV1YLR093C DFG16Q99234 619 aa5.96□□□□□ -1.46
NYV1YLR093C RPS4AP0CX35 261 aaKnown RBP5.95□□□□□ -1.46
NYV1YLR093C RPS4BP0CX36 261 aaKnown RBP5.95□□□□□ -1.46
NYV1YLR093C POL12P38121 705 aaPredicted RBP5.95□□□□□ -1.46
NYV1YLR093C YHL008CP38750 627 aa5.95□□□□□ -1.46
NYV1YLR093C MSH4P40965 878 aaPredicted RBP5.95□□□□□ -1.46
NYV1YLR093C ALT1P52893 592 aa5.95□□□□□ -1.46
NYV1YLR093C NUT1P53114 1132 aa5.95□□□□□ -1.46
NYV1YLR093C SEG2P34250 1132 aa5.94□□□□□ -1.46
NYV1YLR093C REI1P38344 393 aaPredicted RBP5.94□□□□□ -1.46
NYV1YLR093C UBP5P39944 805 aa5.94□□□□□ -1.46
NYV1YLR093C YAF9P53930 226 aa5.94□□□□□ -1.46
NYV1YLR093C ORC3P54790 616 aa5.94□□□□□ -1.46
NYV1YLR093C RNQ1P25367 405 aa5.93□□□□□ -1.46
NYV1YLR093C CDC3P32457 520 aaKnown RBP5.92□□□□□ -1.46
NYV1YLR093C HSP78P33416 811 aa5.91□□□□□ -1.46
NYV1YLR093C TY1A-LR4P0C2I8 440 aaKnown RBP5.9□□□□□ -1.46
NYV1YLR093C TY1A-DR6P0CX70 440 aa5.9□□□□□ -1.46
NYV1YLR093C TY1A-ER1P0CX71 440 aa5.9□□□□□ -1.46
NYV1YLR093C TY1A-LR2P0CX72 440 aa5.9□□□□□ -1.46
NYV1YLR093C TY1A-PLP0CX73 440 aa5.9□□□□□ -1.46
NYV1YLR093C TY1A-JR1P0CX74 440 aa5.9□□□□□ -1.46
NYV1YLR093C TY1A-LR3P0CX75 440 aa5.9□□□□□ -1.46
NYV1YLR093C TY1A-ML2P0CX76 440 aa5.9□□□□□ -1.46
NYV1YLR093C SMY2P32909 740 aaKnown RBP5.9□□□□□ -1.46
NYV1YLR093C RVS167P39743 482 aaKnown RBP5.9□□□□□ -1.46
NYV1YLR093C MDJ2P42834 146 aa5.9□□□□□ -1.46
NYV1YLR093C PRP43P53131 767 aaKnown RBP5.9□□□□□ -1.46
NYV1YLR093C INP54Q08227 384 aaKnown RBP5.9□□□□□ -1.46
NYV1YLR093C ALG6Q12001 544 aaKnown RBP5.9□□□□□ -1.46
NYV1YLR093C TY1A-GR1Q12085 440 aa5.9□□□□□ -1.46
NYV1YLR093C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.9□□□□□ -1.46
NYV1YLR093C TY1A-OLQ92392 440 aaKnown RBP5.9□□□□□ -1.46
NYV1YLR093C ADP1P25371 1049 aa5.89□□□□□ -1.47
NYV1YLR093C NNK1P36003 928 aa5.89□□□□□ -1.47
NYV1YLR093C ERP5P38819 212 aa5.89□□□□□ -1.47
NYV1YLR093C YGR045CP53229 120 aa5.89□□□□□ -1.47
NYV1YLR093C EAR1Q03212 550 aa5.89□□□□□ -1.47
NYV1YLR093C YVC1Q12324 675 aa5.89□□□□□ -1.47
NYV1YLR093C FRT1Q99332 602 aa5.89□□□□□ -1.47
NYV1YLR093C MCM5P29496 775 aaKnown RBP5.88□□□□□ -1.47
NYV1YLR093C TSA1P34760 196 aaKnown RBP5.88□□□□□ -1.47
NYV1YLR093C GRS1P38088 690 aaKnown RBP5.88□□□□□ -1.47
NYV1YLR093C PEX7P39108 375 aa5.88□□□□□ -1.47
NYV1YLR093C NUT2Q06213 157 aa5.88□□□□□ -1.47
NYV1YLR093C GPI13Q07830 1017 aa5.88□□□□□ -1.47
NYV1YLR093C TRE1Q08919 783 aa5.88□□□□□ -1.47
NYV1YLR093C NFS1P25374 497 aa5.87□□□□□ -1.47
NYV1YLR093C EXO5P38289 585 aa5.87□□□□□ -1.47
NYV1YLR093C SHU2P38957 223 aa5.87□□□□□ -1.47
NYV1YLR093C SAM37P50110 327 aa5.87□□□□□ -1.47
NYV1YLR093C NOC3Q07896 663 aaPredicted RBP5.87□□□□□ -1.47
NYV1YLR093C YBL113CQ7M4S9 792 aa5.87□□□□□ -1.47
NYV1YLR093C GAS1P22146 559 aaKnown RBP5.86□□□□□ -1.47
NYV1YLR093C YKL077WP36081 392 aa5.86□□□□□ -1.47
NYV1YLR093C GEF1P37020 779 aa5.86□□□□□ -1.47
NYV1YLR093C ELA1P53861 379 aaPredicted RBP5.86□□□□□ -1.47
NYV1YLR093C CDA2Q06703 312 aa5.86□□□□□ -1.47
NYV1YLR093C AVO1Q08236 1176 aa5.86□□□□□ -1.47
NYV1YLR093C NOG1Q02892 647 aaKnown RBP5.85□□□□□ -1.47
NYV1YLR093C SSY1Q03770 852 aa5.85□□□□□ -1.47
NYV1YLR093C LPX1Q12405 387 aaKnown RBP5.85□□□□□ -1.47
NYV1YLR093C CIC1P38779 376 aaKnown RBP5.84□□□□□ -1.47
NYV1YLR093C MON1P53129 644 aa5.84□□□□□ -1.47
NYV1YLR093C YCS4Q06156 1176 aa5.84□□□□□ -1.47
NYV1YLR093C NEM1P38757 446 aa5.83□□□□□ -1.48
NYV1YLR093C PUS7Q08647 676 aaKnown RBP5.83□□□□□ -1.48
NYV1YLR093C SLS1P42900 643 aa5.82□□□□□ -1.48
NYV1YLR093C HAT1Q12341 374 aa5.82□□□□□ -1.48
NYV1YLR093C YCR015CP25616 317 aa5.81□□□□□ -1.48
NYV1YLR093C PRO1P32264 428 aa5.81□□□□□ -1.48
NYV1YLR093C MTR4P47047 1073 aaKnown RBP5.81□□□□□ -1.48
NYV1YLR093C YAR028WP39548 234 aa5.8□□□□□ -1.48
NYV1YLR093C THI80P35202 319 aa5.79□□□□□ -1.48
NYV1YLR093C PTC7P38797 343 aa5.79□□□□□ -1.48
NYV1YLR093C TPP1Q03796 238 aa5.79□□□□□ -1.48
NYV1YLR093C PRP6P19735 899 aaPredicted RBP5.78□□□□□ -1.48
NYV1YLR093C GCD6P32501 712 aaKnown RBP5.78□□□□□ -1.48
NYV1YLR093C UTP5Q04177 643 aaKnown RBP5.78□□□□□ -1.48
NYV1YLR093C ESC8Q08119 714 aa5.78□□□□□ -1.48
NYV1YLR093C VMA4P22203 233 aaKnown RBP5.77□□□□□ -1.49
NYV1YLR093C MSH3P25336 1018 aa5.77□□□□□ -1.49
NYV1YLR093C VPS35P34110 944 aa5.77□□□□□ -1.49
NYV1YLR093C HSE1P38753 452 aa5.77□□□□□ -1.49
NYV1YLR093C YLR257WQ06146 321 aaKnown RBP5.77□□□□□ -1.49
NYV1YLR093C SAM35P14693 329 aa5.76□□□□□ -1.49
NYV1YLR093C KAR2P16474 682 aaKnown RBP5.76□□□□□ -1.49
NYV1YLR093C RET1P22276 1149 aaKnown RBP5.76□□□□□ -1.49
NYV1YLR093C PRP40P33203 583 aaKnown RBP5.76□□□□□ -1.49
NYV1YLR093C GTS1P40956 396 aa5.76□□□□□ -1.49
NYV1YLR093C RSA3Q05942 220 aaKnown RBP5.76□□□□□ -1.49
NYV1YLR093C HRK1Q08732 759 aaKnown RBP5.76□□□□□ -1.49
NYV1YLR093C PHO4P07270 312 aaKnown RBP5.75□□□□□ -1.49
NYV1YLR093C MDL2P33311 773 aa5.75□□□□□ -1.49
NYV1YLR093C YKL222CP35995 705 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms