RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C YML020WQ03722 664 aa7.97□□□□□ -1.13
SED5YLR026C TOS4Q06266 489 aa7.97□□□□□ -1.13
SED5YLR026C ALG6Q12001 544 aaKnown RBP7.97□□□□□ -1.13
SED5YLR026C YOR223WQ12015 292 aa7.97□□□□□ -1.13
SED5YLR026C SEC20P28791 383 aa7.96□□□□□ -1.14
SED5YLR026C GCD6P32501 712 aaKnown RBP7.96□□□□□ -1.14
SED5YLR026C UGA4P32837 571 aa7.96□□□□□ -1.14
SED5YLR026C VPS35P34110 944 aa7.96□□□□□ -1.14
SED5YLR026C TRP3P00937 484 aa7.95□□□□□ -1.14
SED5YLR026C CHS2P14180 963 aa7.95□□□□□ -1.14
SED5YLR026C GCV1P48015 400 aa7.95□□□□□ -1.14
SED5YLR026C YGR130CP53278 816 aa7.95□□□□□ -1.14
SED5YLR026C DOT1Q04089 582 aaKnown RBP7.95□□□□□ -1.14
SED5YLR026C GIC2Q06648 383 aa7.95□□□□□ -1.14
SED5YLR026C TY1A-LR4P0C2I8 440 aaKnown RBP7.94□□□□□ -1.14
SED5YLR026C TY1A-DR6P0CX70 440 aa7.94□□□□□ -1.14
SED5YLR026C TY1A-ER1P0CX71 440 aa7.94□□□□□ -1.14
SED5YLR026C TY1A-LR2P0CX72 440 aa7.94□□□□□ -1.14
SED5YLR026C TY1A-PLP0CX73 440 aa7.94□□□□□ -1.14
SED5YLR026C TY1A-JR1P0CX74 440 aa7.94□□□□□ -1.14
SED5YLR026C TY1A-LR3P0CX75 440 aa7.94□□□□□ -1.14
SED5YLR026C TY1A-ML2P0CX76 440 aa7.94□□□□□ -1.14
SED5YLR026C PRP40P33203 583 aaKnown RBP7.94□□□□□ -1.14
SED5YLR026C GPT2P36148 743 aa7.94□□□□□ -1.14
SED5YLR026C MEC3Q02574 474 aa7.94□□□□□ -1.14
SED5YLR026C DAL4Q04895 635 aa7.94□□□□□ -1.14
SED5YLR026C TY1A-GR1Q12085 440 aa7.94□□□□□ -1.14
SED5YLR026C TY1A-PR3Q6Q5H1 440 aaKnown RBP7.94□□□□□ -1.14
SED5YLR026C TY1A-OLQ92392 440 aaKnown RBP7.94□□□□□ -1.14
SED5YLR026C YKR073CP36153 106 aa7.93□□□□□ -1.14
SED5YLR026C REI1P38344 393 aaPredicted RBP7.93□□□□□ -1.14
SED5YLR026C YLL054CQ12244 843 aa7.93□□□□□ -1.14
SED5YLR026C RPT1P33299 467 aaKnown RBP7.92□□□□□ -1.14
SED5YLR026C MAC1P35192 417 aa7.92□□□□□ -1.14
SED5YLR026C OMA1P36163 345 aa7.92□□□□□ -1.14
SED5YLR026C SLD2P34252 453 aa7.91□□□□□ -1.14
SED5YLR026C YKL077WP36081 392 aa7.91□□□□□ -1.14
SED5YLR026C EXO5P38289 585 aa7.91□□□□□ -1.14
SED5YLR026C NRD1P53617 575 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
SED5YLR026C MED7Q08278 222 aa7.91□□□□□ -1.14
SED5YLR026C OXR1Q08952 273 aa7.9□□□□□ -1.14
SED5YLR026C SLS1P42900 643 aa7.89□□□□□ -1.15
SED5YLR026C INP52P50942 1183 aa7.89□□□□□ -1.15
SED5YLR026C PEX13P80667 386 aa7.89□□□□□ -1.15
SED5YLR026C ULP1Q02724 621 aa7.89□□□□□ -1.15
SED5YLR026C FAA3P39002 694 aa7.88□□□□□ -1.15
SED5YLR026C WHI3P34761 661 aaKnown RBP7.87□□□□□ -1.15
SED5YLR026C TOS1P38288 455 aa7.87□□□□□ -1.15
SED5YLR026C SHU2P38957 223 aa7.87□□□□□ -1.15
SED5YLR026C RSM26P47141 266 aa7.87□□□□□ -1.15
SED5YLR026C ELA1P53861 379 aaPredicted RBP7.87□□□□□ -1.15
SED5YLR026C NOG1Q02892 647 aaKnown RBP7.87□□□□□ -1.15
SED5YLR026C CYC7P00045 113 aa7.86□□□□□ -1.15
SED5YLR026C KAR2P16474 682 aaKnown RBP7.86□□□□□ -1.15
SED5YLR026C MSB1P21339 1137 aaKnown RBP7.86□□□□□ -1.15
SED5YLR026C MSH3P25336 1018 aa7.86□□□□□ -1.15
SED5YLR026C NEM1P38757 446 aa7.86□□□□□ -1.15
SED5YLR026C SPO74P45819 413 aa7.86□□□□□ -1.15
SED5YLR026C YGR045CP53229 120 aa7.86□□□□□ -1.15
SED5YLR026C NOP8Q08287 484 aaPredicted RBP7.86□□□□□ -1.15
SED5YLR026C AVO1Q08236 1176 aa7.85□□□□□ -1.15
SED5YLR026C SQT1P35184 431 aa7.84□□□□□ -1.15
SED5YLR026C MSH4P40965 878 aaPredicted RBP7.84□□□□□ -1.15
SED5YLR026C MMM1P41800 426 aa7.84□□□□□ -1.15
SED5YLR026C LIP5P32875 414 aa7.83□□□□□ -1.16
SED5YLR026C ARL1P38116 183 aaKnown RBP7.83□□□□□ -1.16
SED5YLR026C POL32P47110 350 aa7.83□□□□□ -1.16
SED5YLR026C HXK1P04806 485 aaKnown RBP7.82□□□□□ -1.16
SED5YLR026C RPS4AP0CX35 261 aaKnown RBP7.82□□□□□ -1.16
SED5YLR026C RPS4BP0CX36 261 aaKnown RBP7.82□□□□□ -1.16
SED5YLR026C ATE1P16639 503 aa7.82□□□□□ -1.16
SED5YLR026C PEX28P38848 579 aa7.82□□□□□ -1.16
SED5YLR026C EAR1Q03212 550 aa7.82□□□□□ -1.16
SED5YLR026C MTR4P47047 1073 aaKnown RBP7.81□□□□□ -1.16
SED5YLR026C CTH1P47976 325 aa7.81□□□□□ -1.16
SED5YLR026C YPL109CQ02981 657 aa7.81□□□□□ -1.16
SED5YLR026C ADI1Q03677 179 aa7.81□□□□□ -1.16
SED5YLR026C GCD1P09032 578 aaPredicted RBP7.8□□□□□ -1.16
SED5YLR026C NFS1P25374 497 aa7.8□□□□□ -1.16
SED5YLR026C CIT3P43635 486 aa7.8□□□□□ -1.16
SED5YLR026C SDH1Q00711 640 aa7.8□□□□□ -1.16
SED5YLR026C UTP5Q04177 643 aaKnown RBP7.8□□□□□ -1.16
SED5YLR026C MCM2P29469 868 aa7.79□□□□□ -1.16
SED5YLR026C PUB1P32588 453 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
SED5YLR026C XKS1P42826 600 aa7.79□□□□□ -1.16
SED5YLR026C ALT1P52893 592 aa7.79□□□□□ -1.16
SED5YLR026C BRE4Q07660 1125 aa7.79□□□□□ -1.16
SED5YLR026C YGL140CP53120 1219 aa7.78□□□□□ -1.16
SED5YLR026C YNR063WP53749 607 aa7.78□□□□□ -1.16
SED5YLR026C RCM1P53972 490 aa7.78□□□□□ -1.16
SED5YLR026C SMY2P32909 740 aaKnown RBP7.77□□□□□ -1.17
SED5YLR026C MGE1P38523 228 aa7.77□□□□□ -1.17
SED5YLR026C YAR028WP39548 234 aa7.77□□□□□ -1.17
SED5YLR026C PIC2P40035 300 aa7.77□□□□□ -1.17
SED5YLR026C MAG2Q06436 670 aaKnown RBP7.77□□□□□ -1.17
SED5YLR026C HEM13P11353 328 aaKnown RBP7.76□□□□□ -1.17
SED5YLR026C HEM3P28789 327 aa7.76□□□□□ -1.17
SED5YLR026C SEA4P38164 1038 aa7.76□□□□□ -1.17
SED5YLR026C NMD3P38861 518 aaKnown RBP7.76□□□□□ -1.17
SED5YLR026C RPS26AP39938 119 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 82.6 ms