RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W TY1B-LR3P0C2I6 1755 aaKnown RBP1.71□□□□□ -2.14
PRP16YKR086W TY1B-PR1P0C2I9 1755 aaKnown RBP1.71□□□□□ -2.14
PRP16YKR086W TY1B-PR2P0C2J0 1756 aa1.71□□□□□ -2.14
PRP16YKR086W TY1B-PR3P0C2J1 1755 aaKnown RBP1.71□□□□□ -2.14
PRP16YKR086W TY1B-JR1P47098 1755 aa1.71□□□□□ -2.14
PRP16YKR086W TY1B-ML2Q03434 1755 aaKnown RBP1.71□□□□□ -2.14
PRP16YKR086W TY1B-ER1Q03612 1755 aa1.71□□□□□ -2.14
PRP16YKR086W TY1B-ML1Q04711 1755 aaKnown RBP1.71□□□□□ -2.14
PRP16YKR086W TY1B-GR2Q12269 1755 aa1.71□□□□□ -2.14
PRP16YKR086W TY1B-OLQ12273 1755 aa1.71□□□□□ -2.14
PRP16YKR086W TY1B-PLQ12414 1755 aaKnown RBP1.71□□□□□ -2.14
PRP16YKR086W HEM13P11353 328 aaKnown RBP1.71□□□□□ -2.14
PRP16YKR086W SAC7P17121 654 aa1.71□□□□□ -2.14
PRP16YKR086W ERS1P17261 260 aa1.71□□□□□ -2.14
PRP16YKR086W SQT1P35184 431 aa1.71□□□□□ -2.14
PRP16YKR086W MGE1P38523 228 aa1.71□□□□□ -2.14
PRP16YKR086W PAN5P38787 379 aa1.71□□□□□ -2.14
PRP16YKR086W RAD55P38953 406 aa1.71□□□□□ -2.14
PRP16YKR086W HAS1Q03532 505 aaKnown RBP1.71□□□□□ -2.14
PRP16YKR086W MET1P36150 593 aa1.71□□□□□ -2.14
PRP16YKR086W ERP5P38819 212 aa1.71□□□□□ -2.14
PRP16YKR086W QDR1P40475 563 aa1.71□□□□□ -2.14
PRP16YKR086W RSM26P47141 266 aa1.71□□□□□ -2.14
PRP16YKR086W MON1P53129 644 aa1.71□□□□□ -2.14
PRP16YKR086W JIP5Q06214 492 aaPredicted RBP1.71□□□□□ -2.14
PRP16YKR086W OXR1Q08952 273 aa1.71□□□□□ -2.14
PRP16YKR086W REC8Q12188 680 aa1.71□□□□□ -2.14
PRP16YKR086W YLR122CQ12312 125 aa1.71□□□□□ -2.14
PRP16YKR086W RPO21P04050 1733 aaKnown RBP1.71□□□□□ -2.14
PRP16YKR086W MMS22Q06164 1454 aa1.71□□□□□ -2.14
PRP16YKR086W DED1P06634 604 aaKnown RBP1.7□□□□□ -2.14
PRP16YKR086W AIM46P38885 310 aa1.7□□□□□ -2.14
PRP16YKR086W STM1P39015 273 aaKnown RBP1.7□□□□□ -2.14
PRP16YKR086W ATG1P53104 897 aa1.7□□□□□ -2.14
PRP16YKR086W NRD1P53617 575 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
PRP16YKR086W YNR063WP53749 607 aa1.7□□□□□ -2.14
PRP16YKR086W CHC1P22137 1653 aaKnown RBP1.7□□□□□ -2.14
PRP16YKR086W COQ2P32378 372 aa1.7□□□□□ -2.14
PRP16YKR086W IRS4P36115 615 aaKnown RBP1.7□□□□□ -2.14
PRP16YKR086W GUP1P53154 560 aa1.7□□□□□ -2.14
PRP16YKR086W NOP7P53261 605 aaKnown RBP1.7□□□□□ -2.14
PRP16YKR086W YRF1-2P40105 1681 aa1.7□□□□□ -2.14
PRP16YKR086W IML1P47170 1584 aa1.7□□□□□ -2.14
PRP16YKR086W SMC1P32908 1225 aa1.7□□□□□ -2.14
PRP16YKR086W MAD1P40957 749 aa1.7□□□□□ -2.14
PRP16YKR086W SOK2P53438 785 aaPredicted RBP1.7□□□□□ -2.14
PRP16YKR086W TY1A-LR4P0C2I8 440 aaKnown RBP1.69□□□□□ -2.14
PRP16YKR086W TY1A-DR6P0CX70 440 aa1.69□□□□□ -2.14
PRP16YKR086W TY1A-ER1P0CX71 440 aa1.69□□□□□ -2.14
PRP16YKR086W TY1A-LR2P0CX72 440 aa1.69□□□□□ -2.14
PRP16YKR086W TY1A-PLP0CX73 440 aa1.69□□□□□ -2.14
PRP16YKR086W TY1A-JR1P0CX74 440 aa1.69□□□□□ -2.14
PRP16YKR086W TY1A-LR3P0CX75 440 aa1.69□□□□□ -2.14
PRP16YKR086W TY1A-ML2P0CX76 440 aa1.69□□□□□ -2.14
PRP16YKR086W SBP1P10080 294 aaKnown RBP1.69□□□□□ -2.14
PRP16YKR086W NPR1P22211 790 aa1.69□□□□□ -2.14
PRP16YKR086W NAM7P30771 971 aaKnown RBP1.69□□□□□ -2.14
PRP16YKR086W TSA1P34760 196 aaKnown RBP1.69□□□□□ -2.14
PRP16YKR086W YHL050CP38721 697 aa1.69□□□□□ -2.14
PRP16YKR086W YHR219WP38900 624 aa1.69□□□□□ -2.14
PRP16YKR086W YIG1Q08956 461 aa1.69□□□□□ -2.14
PRP16YKR086W TY1A-GR1Q12085 440 aa1.69□□□□□ -2.14
PRP16YKR086W TY1A-PR3Q6Q5H1 440 aaKnown RBP1.69□□□□□ -2.14
PRP16YKR086W TY1A-OLQ92392 440 aaKnown RBP1.69□□□□□ -2.14
PRP16YKR086W SNF2P22082 1703 aa1.69□□□□□ -2.14
PRP16YKR086W SEC20P28791 383 aa1.69□□□□□ -2.14
PRP16YKR086W ACF4P47129 309 aa1.69□□□□□ -2.14
PRP16YKR086W MAG2Q06436 670 aaKnown RBP1.69□□□□□ -2.14
PRP16YKR086W WHI5Q12416 295 aa1.69□□□□□ -2.14
PRP16YKR086W NSI1Q12457 570 aa1.69□□□□□ -2.14
PRP16YKR086W YPK9Q12697 1472 aa1.68□□□□□ -2.14
PRP16YKR086W TRS120Q04183 1289 aa1.68□□□□□ -2.14
PRP16YKR086W PUF3Q07807 879 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
PRP16YKR086W AVO1Q08236 1176 aa1.68□□□□□ -2.14
PRP16YKR086W UFD4P33202 1483 aa1.68□□□□□ -2.14
PRP16YKR086W FLP1P03870 423 aa1.68□□□□□ -2.14
PRP16YKR086W HTS1P07263 546 aaKnown RBP1.68□□□□□ -2.14
PRP16YKR086W MET4P32389 672 aa1.68□□□□□ -2.14
PRP16YKR086W TAT1P38085 619 aa1.68□□□□□ -2.14
PRP16YKR086W SAF1P38352 637 aa1.68□□□□□ -2.14
PRP16YKR086W CIC1P38779 376 aaKnown RBP1.68□□□□□ -2.14
PRP16YKR086W POL32P47110 350 aa1.68□□□□□ -2.14
PRP16YKR086W RSC2Q06488 889 aa1.68□□□□□ -2.14
PRP16YKR086W NOC3Q07896 663 aaPredicted RBP1.68□□□□□ -2.14
PRP16YKR086W YOR352WQ08816 343 aa1.68□□□□□ -2.14
PRP16YKR086W PEX13P80667 386 aa1.68□□□□□ -2.14
PRP16YKR086W CDC55Q00362 526 aa1.68□□□□□ -2.14
PRP16YKR086W NUT2Q06213 157 aa1.68□□□□□ -2.14
PRP16YKR086W PDR12Q02785 1511 aa1.67□□□□□ -2.14
PRP16YKR086W RDH54P38086 958 aa1.67□□□□□ -2.14
PRP16YKR086W EXO5P38289 585 aa1.67□□□□□ -2.14
PRP16YKR086W MET10P39692 1035 aa1.67□□□□□ -2.14
PRP16YKR086W DSE4P53753 1117 aa1.67□□□□□ -2.14
PRP16YKR086W EAR1Q03212 550 aa1.67□□□□□ -2.14
PRP16YKR086W OYE2Q03558 400 aaKnown RBP1.67□□□□□ -2.14
PRP16YKR086W VPS15P22219 1454 aa1.67□□□□□ -2.14
PRP16YKR086W MLP2P40457 1679 aa1.67□□□□□ -2.14
PRP16YKR086W PHO4P07270 312 aaKnown RBP1.67□□□□□ -2.14
PRP16YKR086W GCD1P09032 578 aaPredicted RBP1.67□□□□□ -2.14
PRP16YKR086W UGA4P32837 571 aa1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms