RNA–Protein interactions for RNA: YHR206W

SKN7, Transcript of Nuclear response regulator and transcription factor, yeast

Gene SKN7, Length 1,869 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKN7	YHR206W	KIP3	P53086	805 aa	Known RBP	4.28	□□□□□ -1.72
SKN7	YHR206W	ARI1	P53111	347 aa	Known RBP	4.28	□□□□□ -1.72
SKN7	YHR206W	TOM20	P35180	183 aa		4.28	□□□□□ -1.72
SKN7	YHR206W	IPL1	P38991	367 aa		4.28	□□□□□ -1.72
SKN7	YHR206W	LEM3	P42838	414 aa		4.28	□□□□□ -1.72
SKN7	YHR206W	DSE4	P53753	1117 aa		4.28	□□□□□ -1.72
SKN7	YHR206W	TOS4	Q06266	489 aa		4.28	□□□□□ -1.72
SKN7	YHR206W	MSC6	Q08818	692 aa	Known RBP	4.28	□□□□□ -1.72
SKN7	YHR206W	ELG1	Q12050	791 aa		4.28	□□□□□ -1.72
SKN7	YHR206W	PRP5	P21372	849 aa	Predicted RBP	4.27	□□□□□ -1.73
SKN7	YHR206W	NUT1	P53114	1132 aa		4.27	□□□□□ -1.73
SKN7	YHR206W	SPO71	Q03868	1245 aa		4.27	□□□□□ -1.73
SKN7	YHR206W	PHO4	P07270	312 aa	Known RBP	4.26	□□□□□ -1.73
SKN7	YHR206W	ECM2	P38241	364 aa	Known RBP	4.26	□□□□□ -1.73
SKN7	YHR206W	PPX1	P38698	397 aa		4.26	□□□□□ -1.73
SKN7	YHR206W	STM1	P39015	273 aa	Known RBP	4.26	□□□□□ -1.73
SKN7	YHR206W	SAP155	P43612	1002 aa		4.26	□□□□□ -1.73
SKN7	YHR206W	NNF1	P47149	201 aa		4.26	□□□□□ -1.73
SKN7	YHR206W	MON1	P53129	644 aa		4.26	□□□□□ -1.73
SKN7	YHR206W	NCE103	P53615	221 aa		4.26	□□□□□ -1.73
SKN7	YHR206W	NOC3	Q07896	663 aa	Predicted RBP	4.26	□□□□□ -1.73
SKN7	YHR206W	REC8	Q12188	680 aa		4.26	□□□□□ -1.73
SKN7	YHR206W	HTS1	P07263	546 aa	Known RBP	4.26	□□□□□ -1.73
SKN7	YHR206W	NAM7	P30771	971 aa	Known RBP	4.26	□□□□□ -1.73
SKN7	YHR206W	AIM21	P40563	679 aa		4.26	□□□□□ -1.73
SKN7	YHR206W	UGA4	P32837	571 aa		4.25	□□□□□ -1.73
SKN7	YHR206W	MAE1	P36013	669 aa	Known RBP	4.25	□□□□□ -1.73
SKN7	YHR206W	EBP2	P36049	427 aa	Known RBP	4.25	□□□□□ -1.73
SKN7	YHR206W	TY4A-J	P47023	414 aa		4.25	□□□□□ -1.73
SKN7	YHR206W	RNH70	P53331	553 aa		4.25	□□□□□ -1.73
SKN7	YHR206W	BRE1	Q07457	700 aa	Known RBP	4.25	□□□□□ -1.73
SKN7	YHR206W	GAL11	P19659	1081 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	TSR4	P25040	408 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	RSC6	P25632	483 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	AKR1	P39010	764 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	DAK2	P43550	591 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.24	□□□□□ -1.73
SKN7	YHR206W	TY1A-DR6	P0CX70	440 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	TY1A-ER1	P0CX71	440 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	TY1A-LR2	P0CX72	440 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	TY1A-PL	P0CX73	440 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	TY1A-JR1	P0CX74	440 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	TY1A-LR3	P0CX75	440 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	TY1A-ML2	P0CX76	440 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	PMC1	P38929	1173 aa	Predicted RBP	4.24	□□□□□ -1.73
SKN7	YHR206W	SAM37	P50110	327 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	YIG1	Q08956	461 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	TY1A-GR1	Q12085	440 aa		4.24	□□□□□ -1.73
SKN7	YHR206W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.24	□□□□□ -1.73
SKN7	YHR206W	TY1A-OL	Q92392	440 aa	Known RBP	4.24	□□□□□ -1.73
SKN7	YHR206W	SBP1	P10080	294 aa	Known RBP	4.23	□□□□□ -1.73
SKN7	YHR206W	MCM5	P29496	775 aa	Known RBP	4.23	□□□□□ -1.73
SKN7	YHR206W	RRP14	P36080	434 aa	Known RBP	4.23	□□□□□ -1.73
SKN7	YHR206W	TPM2	P40414	161 aa		4.23	□□□□□ -1.73
SKN7	YHR206W	THI12	P42883	340 aa		4.23	□□□□□ -1.73
SKN7	YHR206W	THI5	P43534	340 aa		4.23	□□□□□ -1.73
SKN7	YHR206W	THI11	P47183	340 aa		4.23	□□□□□ -1.73
SKN7	YHR206W	THI13	Q07748	340 aa		4.23	□□□□□ -1.73
SKN7	YHR206W	YLR122C	Q12312	125 aa		4.23	□□□□□ -1.73
SKN7	YHR206W	PMT7	Q06644	662 aa		4.22	□□□□□ -1.73
SKN7	YHR206W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SKN7	YHR206W	RLP24	Q07915	199 aa	Known RBP	4.22	□□□□□ -1.73
SKN7	YHR206W	PPG1	P32838	368 aa		4.22	□□□□□ -1.73
SKN7	YHR206W	SAF1	P38352	637 aa		4.22	□□□□□ -1.73
SKN7	YHR206W	FPR3	P38911	411 aa	Known RBP	4.22	□□□□□ -1.73
SKN7	YHR206W	YCS4	Q06156	1176 aa		4.22	□□□□□ -1.73
SKN7	YHR206W	TRP3	P00937	484 aa		4.21	□□□□□ -1.74
SKN7	YHR206W	RPA135	P22138	1203 aa	Known RBP	4.21	□□□□□ -1.74
SKN7	YHR206W	CIC1	P38779	376 aa	Known RBP	4.21	□□□□□ -1.74
SKN7	YHR206W	RVS167	P39743	482 aa	Known RBP	4.21	□□□□□ -1.74
SKN7	YHR206W	ALO1	P54783	526 aa	Known RBP	4.21	□□□□□ -1.74
SKN7	YHR206W	YMR074C	Q04773	145 aa		4.21	□□□□□ -1.74
SKN7	YHR206W	YDL121C	Q07541	149 aa		4.21	□□□□□ -1.74
SKN7	YHR206W	YOL057W	Q08225	711 aa		4.21	□□□□□ -1.74
SKN7	YHR206W	ALG6	Q12001	544 aa	Known RBP	4.21	□□□□□ -1.74
SKN7	YHR206W	PRP40	P33203	583 aa	Known RBP	4.2	□□□□□ -1.74
SKN7	YHR206W	MPE1	P35728	441 aa	Known RBP	4.2	□□□□□ -1.74
SKN7	YHR206W	EXO5	P38289	585 aa		4.2	□□□□□ -1.74
SKN7	YHR206W	FAA3	P39002	694 aa		4.2	□□□□□ -1.74
SKN7	YHR206W	RPT2	P40327	437 aa	Known RBP	4.2	□□□□□ -1.74
SKN7	YHR206W	GCV1	P48015	400 aa		4.2	□□□□□ -1.74
SKN7	YHR206W	UTP22	P53254	1237 aa	Predicted RBP	4.2	□□□□□ -1.74
SKN7	YHR206W	GIR2	Q03768	265 aa	Predicted RBP	4.2	□□□□□ -1.74
SKN7	YHR206W	RAD2	P07276	1031 aa		4.2	□□□□□ -1.74
SKN7	YHR206W	SSB1	P11484	613 aa	Known RBP	4.2	□□□□□ -1.74
SKN7	YHR206W	SEC20	P28791	383 aa		4.2	□□□□□ -1.74
SKN7	YHR206W	COQ2	P32378	372 aa		4.2	□□□□□ -1.74
SKN7	YHR206W	RPS0A	P32905	252 aa	Known RBP	4.2	□□□□□ -1.74
SKN7	YHR206W	RPT1	P33299	467 aa	Known RBP	4.2	□□□□□ -1.74
SKN7	YHR206W	VPS35	P34110	944 aa		4.2	□□□□□ -1.74
SKN7	YHR206W	YKR073C	P36153	106 aa		4.2	□□□□□ -1.74
SKN7	YHR206W	SSB2	P40150	613 aa	Known RBP	4.2	□□□□□ -1.74
SKN7	YHR206W	DAL4	Q04895	635 aa		4.2	□□□□□ -1.74
SKN7	YHR206W	YOR223W	Q12015	292 aa		4.2	□□□□□ -1.74
SKN7	YHR206W	YOL098C	Q12496	1037 aa		4.2	□□□□□ -1.74
SKN7	YHR206W	ATE1	P16639	503 aa		4.19	□□□□□ -1.74
SKN7	YHR206W	GCD6	P32501	712 aa	Known RBP	4.19	□□□□□ -1.74
SKN7	YHR206W	GPT2	P36148	743 aa		4.19	□□□□□ -1.74
SKN7	YHR206W	MEC3	Q02574	474 aa		4.19	□□□□□ -1.74
SKN7	YHR206W	KAE1	P36132	386 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms