RNA–Protein interactions for RNA: YGR161C

RTS3, Transcript of Putative component of the protein phosphatase type 2A complex, yeast

Gene RTS3, Length 792 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTS3	YGR161C	MET4	P32389	672 aa		4.74	□□□□□ -1.65
RTS3	YGR161C	UGA4	P32837	571 aa		4.74	□□□□□ -1.65
RTS3	YGR161C	GPT2	P36148	743 aa		4.74	□□□□□ -1.65
RTS3	YGR161C	INP52	P50942	1183 aa		4.74	□□□□□ -1.65
RTS3	YGR161C	TOS4	Q06266	489 aa		4.74	□□□□□ -1.65
RTS3	YGR161C	PMT7	Q06644	662 aa		4.74	□□□□□ -1.65
RTS3	YGR161C	ALG6	Q12001	544 aa	Known RBP	4.74	□□□□□ -1.65
RTS3	YGR161C	YOR223W	Q12015	292 aa		4.74	□□□□□ -1.65
RTS3	YGR161C	PHO4	P07270	312 aa	Known RBP	4.73	□□□□□ -1.65
RTS3	YGR161C	TOS1	P38288	455 aa		4.73	□□□□□ -1.65
RTS3	YGR161C	IPL1	P38991	367 aa		4.73	□□□□□ -1.65
RTS3	YGR161C	STM1	P39015	273 aa	Known RBP	4.73	□□□□□ -1.65
RTS3	YGR161C	THI12	P42883	340 aa		4.73	□□□□□ -1.65
RTS3	YGR161C	THI5	P43534	340 aa		4.73	□□□□□ -1.65
RTS3	YGR161C	THI11	P47183	340 aa		4.73	□□□□□ -1.65
RTS3	YGR161C	SAM37	P50110	327 aa		4.73	□□□□□ -1.65
RTS3	YGR161C	DOT1	Q04089	582 aa	Known RBP	4.73	□□□□□ -1.65
RTS3	YGR161C	THI13	Q07748	340 aa		4.73	□□□□□ -1.65
RTS3	YGR161C	PPX1	P38698	397 aa		4.72	□□□□□ -1.65
RTS3	YGR161C	CIC1	P38779	376 aa	Known RBP	4.72	□□□□□ -1.65
RTS3	YGR161C	GCV1	P48015	400 aa		4.72	□□□□□ -1.65
RTS3	YGR161C	UTP22	P53254	1237 aa	Predicted RBP	4.72	□□□□□ -1.65
RTS3	YGR161C	GIC2	Q06648	383 aa		4.72	□□□□□ -1.65
RTS3	YGR161C	MED7	Q08278	222 aa		4.72	□□□□□ -1.65
RTS3	YGR161C	MSC6	Q08818	692 aa	Known RBP	4.72	□□□□□ -1.65
RTS3	YGR161C	DAK2	P43550	591 aa		4.71	□□□□□ -1.66
RTS3	YGR161C	YCS4	Q06156	1176 aa		4.71	□□□□□ -1.66
RTS3	YGR161C	CYC7	P00045	113 aa		4.7	□□□□□ -1.66
RTS3	YGR161C	WHI3	P34761	661 aa	Known RBP	4.7	□□□□□ -1.66
RTS3	YGR161C	SEA4	P38164	1038 aa		4.7	□□□□□ -1.66
RTS3	YGR161C	EXO5	P38289	585 aa		4.7	□□□□□ -1.66
RTS3	YGR161C	REI1	P38344	393 aa	Predicted RBP	4.7	□□□□□ -1.66
RTS3	YGR161C	RVS167	P39743	482 aa	Known RBP	4.7	□□□□□ -1.66
RTS3	YGR161C	CTH1	P47976	325 aa		4.7	□□□□□ -1.66
RTS3	YGR161C	MEC3	Q02574	474 aa		4.7	□□□□□ -1.66
RTS3	YGR161C	SEN54	Q02825	467 aa	Predicted RBP	4.7	□□□□□ -1.66
RTS3	YGR161C	LIP5	P32875	414 aa		4.69	□□□□□ -1.66
RTS3	YGR161C	PRP40	P33203	583 aa	Known RBP	4.69	□□□□□ -1.66
RTS3	YGR161C	SPO74	P45819	413 aa		4.69	□□□□□ -1.66
RTS3	YGR161C	SDH1	Q00711	640 aa		4.69	□□□□□ -1.66
RTS3	YGR161C	DAL4	Q04895	635 aa		4.69	□□□□□ -1.66
RTS3	YGR161C	GCD1	P09032	578 aa	Predicted RBP	4.68	□□□□□ -1.66
RTS3	YGR161C	GCD6	P32501	712 aa	Known RBP	4.68	□□□□□ -1.66
RTS3	YGR161C	SLS1	P42900	643 aa		4.68	□□□□□ -1.66
RTS3	YGR161C	MSB1	P21339	1137 aa	Known RBP	4.67	□□□□□ -1.66
RTS3	YGR161C	RPT1	P33299	467 aa	Known RBP	4.67	□□□□□ -1.66
RTS3	YGR161C	NEM1	P38757	446 aa		4.67	□□□□□ -1.66
RTS3	YGR161C	FAA3	P39002	694 aa		4.67	□□□□□ -1.66
RTS3	YGR161C	MSH4	P40965	878 aa	Predicted RBP	4.67	□□□□□ -1.66
RTS3	YGR161C	MMM1	P41800	426 aa		4.67	□□□□□ -1.66
RTS3	YGR161C	ELA1	P53861	379 aa	Predicted RBP	4.67	□□□□□ -1.66
RTS3	YGR161C	EAR1	Q03212	550 aa		4.67	□□□□□ -1.66
RTS3	YGR161C	MAG2	Q06436	670 aa	Known RBP	4.67	□□□□□ -1.66
RTS3	YGR161C	YLL054C	Q12244	843 aa		4.67	□□□□□ -1.66
RTS3	YGR161C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
RTS3	YGR161C	VPS35	P34110	944 aa		4.66	□□□□□ -1.66
RTS3	YGR161C	RSM26	P47141	266 aa		4.66	□□□□□ -1.66
RTS3	YGR161C	YGR045C	P53229	120 aa		4.66	□□□□□ -1.66
RTS3	YGR161C	PEX13	P80667	386 aa		4.66	□□□□□ -1.66
RTS3	YGR161C	ULP1	Q02724	621 aa		4.66	□□□□□ -1.66
RTS3	YGR161C	BRE4	Q07660	1125 aa		4.66	□□□□□ -1.66
RTS3	YGR161C	RPS4A	P0CX35	261 aa	Known RBP	4.65	□□□□□ -1.67
RTS3	YGR161C	RPS4B	P0CX36	261 aa	Known RBP	4.65	□□□□□ -1.67
RTS3	YGR161C	MSH3	P25336	1018 aa		4.65	□□□□□ -1.67
RTS3	YGR161C	SEC20	P28791	383 aa		4.65	□□□□□ -1.67
RTS3	YGR161C	YKL077W	P36081	392 aa		4.65	□□□□□ -1.67
RTS3	YGR161C	NOG1	Q02892	647 aa	Known RBP	4.65	□□□□□ -1.67
RTS3	YGR161C	YML020W	Q03722	664 aa		4.65	□□□□□ -1.67
RTS3	YGR161C	NMD3	P38861	518 aa	Known RBP	4.64	□□□□□ -1.67
RTS3	YGR161C	CIT3	P43635	486 aa		4.64	□□□□□ -1.67
RTS3	YGR161C	ALT1	P52893	592 aa		4.64	□□□□□ -1.67
RTS3	YGR161C	AVO1	Q08236	1176 aa		4.64	□□□□□ -1.67
RTS3	YGR161C	NFS1	P25374	497 aa		4.63	□□□□□ -1.67
RTS3	YGR161C	SQT1	P35184	431 aa		4.63	□□□□□ -1.67
RTS3	YGR161C	SHU2	P38957	223 aa		4.63	□□□□□ -1.67
RTS3	YGR161C	OXR1	Q08952	273 aa		4.63	□□□□□ -1.67
RTS3	YGR161C	SMY2	P32909	740 aa	Known RBP	4.62	□□□□□ -1.67
RTS3	YGR161C	PEX28	P38848	579 aa		4.62	□□□□□ -1.67
RTS3	YGR161C	OYE3	P41816	400 aa	Predicted RBP	4.62	□□□□□ -1.67
RTS3	YGR161C	XKS1	P42826	600 aa		4.62	□□□□□ -1.67
RTS3	YGR161C	RCM1	P53972	490 aa		4.62	□□□□□ -1.67
RTS3	YGR161C	UTP5	Q04177	643 aa	Known RBP	4.62	□□□□□ -1.67
RTS3	YGR161C	HXK1	P04806	485 aa	Known RBP	4.61	□□□□□ -1.67
RTS3	YGR161C	HEM13	P11353	328 aa	Known RBP	4.61	□□□□□ -1.67
RTS3	YGR161C	KAR2	P16474	682 aa	Known RBP	4.61	□□□□□ -1.67
RTS3	YGR161C	ARL1	P38116	183 aa	Known RBP	4.61	□□□□□ -1.67
RTS3	YGR161C	MTR4	P47047	1073 aa	Known RBP	4.61	□□□□□ -1.67
RTS3	YGR161C	YNR063W	P53749	607 aa		4.61	□□□□□ -1.67
RTS3	YGR161C	YPL109C	Q02981	657 aa		4.61	□□□□□ -1.67
RTS3	YGR161C	ATE1	P16639	503 aa		4.6	□□□□□ -1.67
RTS3	YGR161C	YAR028W	P39548	234 aa		4.6	□□□□□ -1.67
RTS3	YGR161C	PIC2	P40035	300 aa		4.6	□□□□□ -1.67
RTS3	YGR161C	AVT1	P47082	602 aa		4.6	□□□□□ -1.67
RTS3	YGR161C	ADI1	Q03677	179 aa		4.6	□□□□□ -1.67
RTS3	YGR161C	YVC1	Q12324	675 aa		4.6	□□□□□ -1.67
RTS3	YGR161C	MCM2	P29469	868 aa		4.59	□□□□□ -1.67
RTS3	YGR161C	LRG1	P35688	1017 aa		4.59	□□□□□ -1.67
RTS3	YGR161C	NNK1	P36003	928 aa		4.59	□□□□□ -1.67
RTS3	YGR161C	POL32	P47110	350 aa		4.59	□□□□□ -1.67
RTS3	YGR161C	YGL140C	P53120	1219 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms