RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C MCM16Q12262 181 aa3.85□□□□□ -1.79
SPT4YGR063C DDP1Q99321 188 aaKnown RBP3.85□□□□□ -1.79
SPT4YGR063C TY1B-BRQ12193 1756 aa3.84□□□□□ -1.79
SPT4YGR063C TY1B-GR3Q12316 1755 aa3.84□□□□□ -1.79
SPT4YGR063C TY1B-ORQ92393 1755 aa3.84□□□□□ -1.79
SPT4YGR063C TRP5P00931 707 aaKnown RBP3.84□□□□□ -1.79
SPT4YGR063C ADE3P07245 946 aaKnown RBP3.84□□□□□ -1.79
SPT4YGR063C CDC16P09798 840 aa3.84□□□□□ -1.79
SPT4YGR063C GCD2P12754 651 aaPredicted RBP3.84□□□□□ -1.79
SPT4YGR063C TYR1P20049 452 aa3.84□□□□□ -1.79
SPT4YGR063C UBC1P21734 215 aaKnown RBP3.84□□□□□ -1.79
SPT4YGR063C KCC4P25389 1037 aa3.84□□□□□ -1.79
SPT4YGR063C HIR2P32480 875 aa3.84□□□□□ -1.79
SPT4YGR063C SEC66P33754 206 aa3.84□□□□□ -1.79
SPT4YGR063C YEL1P34225 687 aa3.84□□□□□ -1.79
SPT4YGR063C MRP8P35719 219 aa3.84□□□□□ -1.79
SPT4YGR063C ECM4P36156 370 aa3.84□□□□□ -1.79
SPT4YGR063C ATG14P38270 344 aa3.84□□□□□ -1.79
SPT4YGR063C AMN1P38285 549 aaPredicted RBP3.84□□□□□ -1.79
SPT4YGR063C LAM1P38851 1228 aa3.84□□□□□ -1.79
SPT4YGR063C BUD16P39988 312 aa3.84□□□□□ -1.79
SPT4YGR063C GTT3P39996 337 aa3.84□□□□□ -1.79
SPT4YGR063C POL31P46957 487 aa3.84□□□□□ -1.79
SPT4YGR063C YJR079WP47126 109 aa3.84□□□□□ -1.79
SPT4YGR063C ARI1P53111 347 aaKnown RBP3.84□□□□□ -1.79
SPT4YGR063C BTN2P53286 410 aa3.84□□□□□ -1.79
SPT4YGR063C DSL1P53847 754 aa3.84□□□□□ -1.79
SPT4YGR063C SYH1Q02875 849 aaKnown RBP3.84□□□□□ -1.79
SPT4YGR063C YML119WQ03208 357 aa3.84□□□□□ -1.79
SPT4YGR063C YDR341CQ05506 607 aaKnown RBP3.84□□□□□ -1.79
SPT4YGR063C ATG23Q06671 453 aa3.84□□□□□ -1.79
SPT4YGR063C YCG1Q06680 1035 aa3.84□□□□□ -1.79
SPT4YGR063C DUR1,2P32528 1835 aaKnown RBP3.84□□□□□ -1.8
SPT4YGR063C TOM70P07213 617 aaKnown RBP3.83□□□□□ -1.8
SPT4YGR063C PDR1P12383 1068 aa3.83□□□□□ -1.8
SPT4YGR063C FRS2P15625 503 aaKnown RBP3.83□□□□□ -1.8
SPT4YGR063C FAR1P21268 830 aa3.83□□□□□ -1.8
SPT4YGR063C CSE1P33307 960 aa3.83□□□□□ -1.8
SPT4YGR063C PIH1P38768 344 aa3.83□□□□□ -1.8
SPT4YGR063C BRL1P38770 471 aa3.83□□□□□ -1.8
SPT4YGR063C NUP60P39705 539 aa3.83□□□□□ -1.8
SPT4YGR063C MRX1P40050 688 aa3.83□□□□□ -1.8
SPT4YGR063C SYG1P40528 902 aa3.83□□□□□ -1.8
SPT4YGR063C SAP185P40856 1058 aa3.83□□□□□ -1.8
SPT4YGR063C TRS85P46944 698 aa3.83□□□□□ -1.8
SPT4YGR063C SET2P46995 733 aaKnown RBP3.83□□□□□ -1.8
SPT4YGR063C YGL242CP53066 181 aa3.83□□□□□ -1.8
SPT4YGR063C PEX14P53112 341 aa3.83□□□□□ -1.8
SPT4YGR063C ALF1P53904 254 aa3.83□□□□□ -1.8
SPT4YGR063C FAR11P53917 953 aa3.83□□□□□ -1.8
SPT4YGR063C RCM1P53972 490 aa3.83□□□□□ -1.8
SPT4YGR063C SRC1Q03707 834 aa3.83□□□□□ -1.8
SPT4YGR063C YML108WQ03759 105 aa3.83□□□□□ -1.8
SPT4YGR063C YKU80Q04437 629 aa3.83□□□□□ -1.8
SPT4YGR063C SPN1Q06505 410 aaPredicted RBP3.83□□□□□ -1.8
SPT4YGR063C PIB1Q06651 286 aa3.83□□□□□ -1.8
SPT4YGR063C UTP4Q06679 776 aaKnown RBP3.83□□□□□ -1.8
SPT4YGR063C SLK19Q08581 821 aaKnown RBP3.83□□□□□ -1.8
SPT4YGR063C YOR223WQ12015 292 aa3.83□□□□□ -1.8
SPT4YGR063C IOC2Q12072 812 aa3.83□□□□□ -1.8
SPT4YGR063C APC2Q12440 853 aa3.83□□□□□ -1.8
SPT4YGR063C YBL029C-AQ3E756 94 aa3.83□□□□□ -1.8
SPT4YGR063C NUP188P52593 1655 aaKnown RBP3.83□□□□□ -1.8
SPT4YGR063C RPO41P13433 1351 aaKnown RBP3.82□□□□□ -1.8
SPT4YGR063C DAL7P21826 554 aa3.82□□□□□ -1.8
SPT4YGR063C MBR1P23493 339 aa3.82□□□□□ -1.8
SPT4YGR063C RME1P32338 300 aaKnown RBP3.82□□□□□ -1.8
SPT4YGR063C HSP78P33416 811 aa3.82□□□□□ -1.8
SPT4YGR063C PRX1P34227 261 aaKnown RBP3.82□□□□□ -1.8
SPT4YGR063C TBS1P38114 1094 aa3.82□□□□□ -1.8
SPT4YGR063C REI1P38344 393 aaPredicted RBP3.82□□□□□ -1.8
SPT4YGR063C CAJ1P39101 391 aa3.82□□□□□ -1.8
SPT4YGR063C SPC72P39723 622 aa3.82□□□□□ -1.8
SPT4YGR063C VID27P40157 782 aa3.82□□□□□ -1.8
SPT4YGR063C GVP36P40531 326 aaKnown RBP3.82□□□□□ -1.8
SPT4YGR063C MDJ2P42834 146 aa3.82□□□□□ -1.8
SPT4YGR063C APT1P49435 187 aaKnown RBP3.82□□□□□ -1.8
SPT4YGR063C COP1P53622 1201 aaKnown RBP3.82□□□□□ -1.8
SPT4YGR063C BNI4P53858 892 aa3.82□□□□□ -1.8
SPT4YGR063C TIM11P81449 96 aaPredicted RBP3.82□□□□□ -1.8
SPT4YGR063C ERB1Q04660 807 aaKnown RBP3.82□□□□□ -1.8
SPT4YGR063C MRD1Q06106 887 aaKnown RBP3.82□□□□□ -1.8
SPT4YGR063C SGD1Q06132 899 aa3.82□□□□□ -1.8
SPT4YGR063C SFH1Q06168 426 aa3.82□□□□□ -1.8
SPT4YGR063C MPC54Q08550 464 aa3.82□□□□□ -1.8
SPT4YGR063C MET7Q08645 548 aa3.82□□□□□ -1.8
SPT4YGR063C CLF1Q12309 687 aaPredicted RBP3.82□□□□□ -1.8
SPT4YGR063C BRR1Q99177 341 aaPredicted RBP3.82□□□□□ -1.8
SPT4YGR063C TRS33Q99394 268 aa3.82□□□□□ -1.8
SPT4YGR063C YPR089WO13585 888 aa3.81□□□□□ -1.8
SPT4YGR063C RPL19AP0CX82 189 aaKnown RBP3.81□□□□□ -1.8
SPT4YGR063C RPL19BP0CX83 189 aaPredicted RBP3.81□□□□□ -1.8
SPT4YGR063C VMA1P17255 1071 aaKnown RBP3.81□□□□□ -1.8
SPT4YGR063C TPM1P17536 199 aaKnown RBP3.81□□□□□ -1.8
SPT4YGR063C IME1P21190 360 aa3.81□□□□□ -1.8
SPT4YGR063C ADE2P21264 571 aaKnown RBP3.81□□□□□ -1.8
SPT4YGR063C UGA3P26370 528 aa3.81□□□□□ -1.8
SPT4YGR063C CPS1P27614 576 aa3.81□□□□□ -1.8
SPT4YGR063C SEC20P28791 383 aa3.81□□□□□ -1.8
SPT4YGR063C ECM32P32644 1121 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms