RNA–Protein interactions for RNA: YGL207W

SPT16, Transcript of Subunit of the heterodimeric FACT complex (Spt16p-Pob3p), yeast

Gene SPT16, Length 3,108 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT16	YGL207W	SPN1	Q06505	410 aa	Predicted RBP	4.08	□□□□□ -1.76
SPT16	YGL207W	RSC58	Q07979	502 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	ALR1	Q08269	859 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	RUD3	Q12234	484 aa	Known RBP	4.08	□□□□□ -1.76
SPT16	YGL207W	NSI1	Q12457	570 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	MSS18	P08593	268 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	GAL2	P13181	574 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	ACE2	P21192	770 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	MKK2	P32491	506 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	MNR2	P35724	969 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	BCD1	P38772	366 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	TPA1	P40032	644 aa	Known RBP	4.08	□□□□□ -1.76
SPT16	YGL207W	ROM1	P53046	1155 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	TRS130	Q03660	1102 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	RAD33	Q04231	177 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	ARV1	Q06541	321 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	SWR1	Q05471	1514 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	PHO8	P11491	566 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	MCM10	P32354	571 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	NPL6	P32832	435 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	DHR2	P36009	735 aa	Predicted RBP	4.08	□□□□□ -1.76
SPT16	YGL207W	YBL036C	P38197	257 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	MEF2	P39677	819 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	GPP2	P40106	250 aa	Known RBP	4.08	□□□□□ -1.76
SPT16	YGL207W	HAS1	Q03532	505 aa	Known RBP	4.08	□□□□□ -1.76
SPT16	YGL207W	NTG2	Q08214	380 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	RRP6	Q12149	733 aa	Known RBP	4.08	□□□□□ -1.76
SPT16	YGL207W	APC11	Q12157	165 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	SCM3	Q12334	223 aa		4.08	□□□□□ -1.76
SPT16	YGL207W	TMA7	Q3E764	64 aa	Known RBP	4.08	□□□□□ -1.76
SPT16	YGL207W	EUG1	P32474	517 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	HSP78	P33416	811 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	DOT6	P40059	670 aa	Known RBP	4.07	□□□□□ -1.76
SPT16	YGL207W	RAD26	P40352	1085 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	ALA1	P40825	983 aa	Known RBP	4.07	□□□□□ -1.76
SPT16	YGL207W	HUL4	P40985	892 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	ISM1	P48526	1002 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	ECM23	Q02710	187 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	NSE5	Q03718	556 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	YLR352W	Q06479	807 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	YLL054C	Q12244	843 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	TAF2	P23255	1407 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	TRP2	P00899	507 aa	Known RBP	4.07	□□□□□ -1.76
SPT16	YGL207W	TRP5	P00931	707 aa	Known RBP	4.07	□□□□□ -1.76
SPT16	YGL207W	MIH1	P23748	554 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	SPT5	P27692	1063 aa	Known RBP	4.07	□□□□□ -1.76
SPT16	YGL207W	LYP1	P32487	611 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	GRS1	P38088	690 aa	Known RBP	4.07	□□□□□ -1.76
SPT16	YGL207W	YHL041W	P38730	149 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	YAP5	P40574	245 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	YML6	P51998	286 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	PRO2	P54885	456 aa	Known RBP	4.07	□□□□□ -1.76
SPT16	YGL207W	YKU80	Q04437	629 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	PIB1	Q06651	286 aa		4.07	□□□□□ -1.76
SPT16	YGL207W	RGR1	P19263	1082 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	SRM1	P21827	482 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	RAD16	P31244	790 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	DEP1	P31385	405 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	YKL050C	P35736	922 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	RIM4	P38741	713 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	RSP5	P39940	809 aa	Known RBP	4.06	□□□□□ -1.76
SPT16	YGL207W	QDR1	P40475	563 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	MET14	Q02196	202 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	ARA2	Q04212	335 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	YIL002W-A	Q3E7Z5	69 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	LSO1	Q3E827	93 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	HXK1	P04806	485 aa	Known RBP	4.06	□□□□□ -1.76
SPT16	YGL207W	LAM1	P38851	1228 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	YGR153W	P48238	217 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	SGD1	Q06132	899 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	NOC3	Q07896	663 aa	Predicted RBP	4.06	□□□□□ -1.76
SPT16	YGL207W	YLR125W	Q12138	136 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SPT16	YGL207W	SSH4	P32343	579 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SPT16	YGL207W	FMP10	P40098	244 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	IRC6	P43615	237 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	MDE1	P47095	244 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	HOP2	P53187	214 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	YGR122W	P53272	402 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	ZDS2	P54786	942 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	YDR131C	Q03899	556 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	SRF1	Q12516	437 aa		4.06	□□□□□ -1.76
SPT16	YGL207W	MET8	P15807	274 aa		4.05	□□□□□ -1.76
SPT16	YGL207W	DBP3	P20447	523 aa	Known RBP	4.05	□□□□□ -1.76
SPT16	YGL207W	YKL100C	P34248	587 aa		4.05	□□□□□ -1.76
SPT16	YGL207W	MGE1	P38523	228 aa		4.05	□□□□□ -1.76
SPT16	YGL207W	SKP2	P42843	763 aa		4.05	□□□□□ -1.76
SPT16	YGL207W	PIL1	P53252	339 aa	Known RBP	4.05	□□□□□ -1.76
SPT16	YGL207W	ERV25	P54837	211 aa	Known RBP	4.05	□□□□□ -1.76
SPT16	YGL207W	CTR9	P89105	1077 aa		4.05	□□□□□ -1.76
SPT16	YGL207W	FLC1	Q08967	793 aa		4.05	□□□□□ -1.76
SPT16	YGL207W	TFB4	Q12004	338 aa		4.05	□□□□□ -1.76
SPT16	YGL207W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
SPT16	YGL207W	CAN1	P04817	590 aa		4.05	□□□□□ -1.76
SPT16	YGL207W	RPL5	P26321	297 aa	Known RBP	4.05	□□□□□ -1.76
SPT16	YGL207W	TFC3	P34111	1160 aa		4.05	□□□□□ -1.76
SPT16	YGL207W	AMN1	P38285	549 aa	Predicted RBP	4.05	□□□□□ -1.76
SPT16	YGL207W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	RIP-Chip
SPT16	YGL207W	MNT3	P40549	630 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms