RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C RRT6P53117 311 aaPredicted RBP3.66□□□□□ -1.82
PRE4YFR050C ART5P53244 586 aaKnown RBP3.66□□□□□ -1.82
PRE4YFR050C LCB5Q06147 687 aaKnown RBP3.66□□□□□ -1.82
PRE4YFR050C OPT2Q06593 877 aa3.66□□□□□ -1.82
PRE4YFR050C HDA3Q06623 655 aa3.66□□□□□ -1.82
PRE4YFR050C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
PRE4YFR050C MDN1Q12019 4910 aaKnown RBP3.65□□□□□ -1.83
PRE4YFR050C AIM9P40053 627 aaKnown RBP3.65□□□□□ -1.83
PRE4YFR050C XKS1P42826 600 aa3.65□□□□□ -1.83
PRE4YFR050C YFL034WP43564 1073 aa3.65□□□□□ -1.83
PRE4YFR050C VPS4P52917 437 aa3.65□□□□□ -1.83
PRE4YFR050C SCW11P53189 542 aa3.65□□□□□ -1.83
PRE4YFR050C UBP2Q01476 1272 aa3.65□□□□□ -1.83
PRE4YFR050C WTM2Q12206 467 aa3.65□□□□□ -1.83
PRE4YFR050C RLF2Q12495 606 aa3.65□□□□□ -1.83
PRE4YFR050C MEC1P38111 2368 aa3.65□□□□□ -1.83
PRE4YFR050C SPT2P06843 333 aaPredicted RBP3.64□□□□□ -1.83
PRE4YFR050C RDH54P38086 958 aa3.64□□□□□ -1.83
PRE4YFR050C YJR098CP47139 656 aa3.64□□□□□ -1.83
PRE4YFR050C TRM44Q02648 567 aaKnown RBP3.64□□□□□ -1.83
PRE4YFR050C ERO1Q03103 563 aa3.64□□□□□ -1.83
PRE4YFR050C BUD21Q08492 214 aaPredicted RBP3.64□□□□□ -1.83
PRE4YFR050C HPR1P17629 752 aaKnown RBP3.63□□□□□ -1.83
PRE4YFR050C PDI1P17967 522 aaKnown RBP3.63□□□□□ -1.83
PRE4YFR050C TTI1P36097 1038 aa3.63□□□□□ -1.83
PRE4YFR050C UTP7P40055 554 aaKnown RBP3.63□□□□□ -1.83
PRE4YFR050C ALA1P40825 983 aaKnown RBP3.63□□□□□ -1.83
PRE4YFR050C YMR206WQ03695 313 aa3.63□□□□□ -1.83
PRE4YFR050C PEP12P32854 288 aa3.62□□□□□ -1.83
PRE4YFR050C GLY1P37303 387 aaKnown RBP3.62□□□□□ -1.83
PRE4YFR050C SLX8P40072 274 aa3.62□□□□□ -1.83
PRE4YFR050C TSC13Q99190 310 aa3.62□□□□□ -1.83
PRE4YFR050C SWI5P08153 709 aa3.61□□□□□ -1.83
PRE4YFR050C CAF20P12962 161 aaKnown RBP3.61□□□□□ -1.83
PRE4YFR050C HAP4P14064 554 aa3.61□□□□□ -1.83
PRE4YFR050C PHO87P25360 923 aa3.61□□□□□ -1.83
PRE4YFR050C TGL4P36165 910 aa3.61□□□□□ -1.83
PRE4YFR050C AHP1P38013 176 aaKnown RBP3.61□□□□□ -1.83
PRE4YFR050C CAF120P53836 1060 aa3.61□□□□□ -1.83
PRE4YFR050C ECM23Q02710 187 aa3.61□□□□□ -1.83
PRE4YFR050C LYS2P07702 1392 aa3.61□□□□□ -1.83
PRE4YFR050C PMD1P32634 1753 aa3.61□□□□□ -1.83
PRE4YFR050C YLR419WQ06698 1435 aaKnown RBP3.61□□□□□ -1.83
PRE4YFR050C RPS6AP0CX37 236 aaKnown RBP3.6□□□□□ -1.83
PRE4YFR050C RPS6BP0CX38 236 aaPredicted RBP3.6□□□□□ -1.83
PRE4YFR050C NTH2P35172 780 aa3.6□□□□□ -1.83
PRE4YFR050C STV1P37296 890 aa3.6□□□□□ -1.83
PRE4YFR050C SUM1P46676 1062 aa3.6□□□□□ -1.83
PRE4YFR050C ADE16P54113 591 aaKnown RBP3.6□□□□□ -1.83
PRE4YFR050C TY1A-BLQ12266 440 aa3.6□□□□□ -1.83
PRE4YFR050C RPO41P13433 1351 aaKnown RBP3.6□□□□□ -1.83
PRE4YFR050C GAL2P13181 574 aa3.59□□□□□ -1.83
PRE4YFR050C UIP5P36137 443 aa3.59□□□□□ -1.83
PRE4YFR050C OSH7P38755 437 aa3.59□□□□□ -1.83
PRE4YFR050C SPR3P41901 512 aa3.59□□□□□ -1.83
PRE4YFR050C ACS2P52910 683 aaKnown RBP3.59□□□□□ -1.83
PRE4YFR050C MTC5Q03897 1148 aa3.59□□□□□ -1.83
PRE4YFR050C GAS4Q08271 471 aa3.59□□□□□ -1.83
PRE4YFR050C CYT1P07143 309 aa3.58□□□□□ -1.84
PRE4YFR050C DAL1P32375 460 aa3.58□□□□□ -1.84
PRE4YFR050C UBX7P38349 436 aa3.58□□□□□ -1.84
PRE4YFR050C VTC4P47075 721 aa3.58□□□□□ -1.84
PRE4YFR050C FMP30Q02883 468 aa3.58□□□□□ -1.84
PRE4YFR050C PIN2Q12057 282 aa3.58□□□□□ -1.84
PRE4YFR050C ADE6P38972 1358 aaKnown RBP3.58□□□□□ -1.84
PRE4YFR050C RAV1P47104 1357 aa3.58□□□□□ -1.84
PRE4YFR050C DYN1P36022 4092 aa3.57□□□□□ -1.84
PRE4YFR050C SSN3P39073 555 aa3.57□□□□□ -1.84
PRE4YFR050C YIR007WP40566 764 aa3.57□□□□□ -1.84
PRE4YFR050C UBR2Q07963 1872 aa3.56□□□□□ -1.84
PRE4YFR050C VAN1P23642 535 aa3.56□□□□□ -1.84
PRE4YFR050C DBP2P24783 546 aaKnown RBP3.56□□□□□ -1.84
PRE4YFR050C ACO2P39533 789 aa3.56□□□□□ -1.84
PRE4YFR050C ROG3P43602 733 aa3.56□□□□□ -1.84
PRE4YFR050C ALD4P46367 519 aaKnown RBP3.56□□□□□ -1.84
PRE4YFR050C JJJ2P46997 583 aa3.56□□□□□ -1.84
PRE4YFR050C UBP15P50101 1230 aa3.56□□□□□ -1.84
PRE4YFR050C RCM1P53972 490 aa3.56□□□□□ -1.84
PRE4YFR050C TAF7Q05021 590 aa3.56□□□□□ -1.84
PRE4YFR050C GRX6Q12438 231 aa3.56□□□□□ -1.84
PRE4YFR050C CDC19P00549 500 aaKnown RBP3.55□□□□□ -1.84
PRE4YFR050C PUP1P25043 261 aa3.55□□□□□ -1.84
PRE4YFR050C YTA6P40328 754 aa3.55□□□□□ -1.84
PRE4YFR050C YTA12P40341 825 aa3.55□□□□□ -1.84
PRE4YFR050C ROM1P53046 1155 aa3.55□□□□□ -1.84
PRE4YFR050C TY1A-MR1Q04215 440 aa3.55□□□□□ -1.84
PRE4YFR050C YDR461C-AQ2V2P7 80 aa3.55□□□□□ -1.84
PRE4YFR050C TRS33Q99394 268 aa3.55□□□□□ -1.84
PRE4YFR050C FLO1P32768 1537 aa3.54□□□□□ -1.84
PRE4YFR050C SIR4P11978 1358 aa3.54□□□□□ -1.84
PRE4YFR050C MCM1P11746 286 aa3.54□□□□□ -1.84
PRE4YFR050C PPH3P32345 308 aa3.54□□□□□ -1.84
PRE4YFR050C IRE1P32361 1115 aa3.54□□□□□ -1.84
PRE4YFR050C PEX2P32800 271 aa3.54□□□□□ -1.84
PRE4YFR050C RPL34AP87262 121 aaPredicted RBP3.54□□□□□ -1.84
PRE4YFR050C YPQ2Q06328 317 aa3.54□□□□□ -1.84
PRE4YFR050C TY1A-DR3Q12441 440 aa3.54□□□□□ -1.84
PRE4YFR050C TUS1Q06412 1307 aa3.53□□□□□ -1.84
PRE4YFR050C GRX1P25373 110 aaKnown RBP3.53□□□□□ -1.84
PRE4YFR050C SLA1P32790 1244 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms