RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W RVS167P39743 482 aaKnown RBP4.15□□□□□ -1.75
NIC96YFR002W TOS4Q06266 489 aa4.15□□□□□ -1.75
NIC96YFR002W TY1A-GR1Q12085 440 aa4.15□□□□□ -1.75
NIC96YFR002W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.15□□□□□ -1.75
NIC96YFR002W TY1A-OLQ92392 440 aaKnown RBP4.15□□□□□ -1.75
NIC96YFR002W DAK2P43550 591 aa4.14□□□□□ -1.75
NIC96YFR002W UTP22P53254 1237 aaPredicted RBP4.14□□□□□ -1.75
NIC96YFR002W ALO1P54783 526 aaKnown RBP4.14□□□□□ -1.75
NIC96YFR002W YOR223WQ12015 292 aa4.14□□□□□ -1.75
NIC96YFR002W TRP3P00937 484 aa4.14□□□□□ -1.75
NIC96YFR002W GCD6P32501 712 aaKnown RBP4.14□□□□□ -1.75
NIC96YFR002W VPS35P34110 944 aa4.14□□□□□ -1.75
NIC96YFR002W KAE1P36132 386 aa4.14□□□□□ -1.75
NIC96YFR002W MEC3Q02574 474 aa4.14□□□□□ -1.75
NIC96YFR002W YMR074CQ04773 145 aa4.14□□□□□ -1.75
NIC96YFR002W SEC20P28791 383 aa4.13□□□□□ -1.75
NIC96YFR002W UGA4P32837 571 aa4.13□□□□□ -1.75
NIC96YFR002W YKR073CP36153 106 aa4.13□□□□□ -1.75
NIC96YFR002W THI12P42883 340 aa4.13□□□□□ -1.75
NIC96YFR002W THI5P43534 340 aa4.13□□□□□ -1.75
NIC96YFR002W THI11P47183 340 aa4.13□□□□□ -1.75
NIC96YFR002W YML020WQ03722 664 aa4.13□□□□□ -1.75
NIC96YFR002W THI13Q07748 340 aa4.13□□□□□ -1.75
NIC96YFR002W PRP40P33203 583 aaKnown RBP4.12□□□□□ -1.75
NIC96YFR002W EXO5P38289 585 aa4.12□□□□□ -1.75
NIC96YFR002W INP52P50942 1183 aa4.12□□□□□ -1.75
NIC96YFR002W NOP8Q08287 484 aaPredicted RBP4.12□□□□□ -1.75
NIC96YFR002W CHS2P14180 963 aa4.12□□□□□ -1.75
NIC96YFR002W GPT2P36148 743 aa4.12□□□□□ -1.75
NIC96YFR002W DOT1Q04089 582 aaKnown RBP4.12□□□□□ -1.75
NIC96YFR002W REI1P38344 393 aaPredicted RBP4.11□□□□□ -1.75
NIC96YFR002W YGR130CP53278 816 aa4.11□□□□□ -1.75
NIC96YFR002W NRD1P53617 575 aaKnown RBP RIP-Chip data4.11□□□□□ -1.75not detected
NIC96YFR002W NOG1Q02892 647 aaKnown RBP4.11□□□□□ -1.75
NIC96YFR002W GIC2Q06648 383 aa4.11□□□□□ -1.75
NIC96YFR002W YLL054CQ12244 843 aa4.11□□□□□ -1.75
NIC96YFR002W DAL4Q04895 635 aa4.11□□□□□ -1.75
NIC96YFR002W ALG6Q12001 544 aaKnown RBP4.11□□□□□ -1.75
NIC96YFR002W OMA1P36163 345 aa4.1□□□□□ -1.75
NIC96YFR002W MED7Q08278 222 aa4.1□□□□□ -1.75
NIC96YFR002W RPT1P33299 467 aaKnown RBP4.1□□□□□ -1.75
NIC96YFR002W NEM1P38757 446 aa4.1□□□□□ -1.75
NIC96YFR002W FAA3P39002 694 aa4.1□□□□□ -1.75
NIC96YFR002W SPO74P45819 413 aa4.1□□□□□ -1.75
NIC96YFR002W ULP1Q02724 621 aa4.1□□□□□ -1.75
NIC96YFR002W ARL1P38116 183 aaKnown RBP4.09□□□□□ -1.75
NIC96YFR002W SLS1P42900 643 aa4.09□□□□□ -1.75
NIC96YFR002W MSB1P21339 1137 aaKnown RBP4.09□□□□□ -1.76
NIC96YFR002W MAC1P35192 417 aa4.09□□□□□ -1.76
NIC96YFR002W TOS1P38288 455 aa4.09□□□□□ -1.76
NIC96YFR002W HXK1P04806 485 aaKnown RBP4.08□□□□□ -1.76
NIC96YFR002W MSH3P25336 1018 aa4.08□□□□□ -1.76
NIC96YFR002W YKL077WP36081 392 aa4.08□□□□□ -1.76
NIC96YFR002W MSH4P40965 878 aaPredicted RBP4.08□□□□□ -1.76
NIC96YFR002W CTH1P47976 325 aa4.08□□□□□ -1.76
NIC96YFR002W YGR045CP53229 120 aa4.08□□□□□ -1.76
NIC96YFR002W CYC7P00045 113 aa4.07□□□□□ -1.76
NIC96YFR002W SLD2P34252 453 aa4.07□□□□□ -1.76
NIC96YFR002W WHI3P34761 661 aaKnown RBP4.07□□□□□ -1.76
NIC96YFR002W SHU2P38957 223 aa4.07□□□□□ -1.76
NIC96YFR002W YPL109CQ02981 657 aa4.07□□□□□ -1.76
NIC96YFR002W OXR1Q08952 273 aa4.07□□□□□ -1.76
NIC96YFR002W KAR2P16474 682 aaKnown RBP4.07□□□□□ -1.76
NIC96YFR002W MMM1P41800 426 aa4.06□□□□□ -1.76
NIC96YFR002W ALT1P52893 592 aa4.06□□□□□ -1.76
NIC96YFR002W PEX13P80667 386 aa4.06□□□□□ -1.76
NIC96YFR002W GCD1P09032 578 aaPredicted RBP4.06□□□□□ -1.76
NIC96YFR002W HEM13P11353 328 aaKnown RBP4.06□□□□□ -1.76
NIC96YFR002W ATE1P16639 503 aa4.06□□□□□ -1.76
NIC96YFR002W PUB1P32588 453 aaKnown RBP RIP-Chip data4.06□□□□□ -1.76not detected
NIC96YFR002W SEA4P38164 1038 aa4.06□□□□□ -1.76
NIC96YFR002W RSM26P47141 266 aa4.06□□□□□ -1.76
NIC96YFR002W ELA1P53861 379 aaPredicted RBP4.06□□□□□ -1.76
NIC96YFR002W EAR1Q03212 550 aa4.06□□□□□ -1.76
NIC96YFR002W ADI1Q03677 179 aa4.06□□□□□ -1.76
NIC96YFR002W UTP5Q04177 643 aaKnown RBP4.06□□□□□ -1.76
NIC96YFR002W MAG2Q06436 670 aaKnown RBP4.06□□□□□ -1.76
NIC96YFR002W RRP15Q06511 250 aaPredicted RBP4.06□□□□□ -1.76
NIC96YFR002W KOG1P38873 1557 aa4.06□□□□□ -1.76
NIC96YFR002W RPS4AP0CX35 261 aaKnown RBP4.05□□□□□ -1.76
NIC96YFR002W RPS4BP0CX36 261 aaKnown RBP4.05□□□□□ -1.76
NIC96YFR002W RDH54P38086 958 aa4.05□□□□□ -1.76
NIC96YFR002W PEX28P38848 579 aa4.05□□□□□ -1.76
NIC96YFR002W PIC2P40035 300 aa4.05□□□□□ -1.76
NIC96YFR002W CIT3P43635 486 aa4.05□□□□□ -1.76
NIC96YFR002W BRE4Q07660 1125 aa4.05□□□□□ -1.76
NIC96YFR002W SMY2P32909 740 aaKnown RBP4.04□□□□□ -1.76
NIC96YFR002W SQT1P35184 431 aa4.04□□□□□ -1.76
NIC96YFR002W POL32P47110 350 aa4.04□□□□□ -1.76
NIC96YFR002W YGL140CP53120 1219 aa4.04□□□□□ -1.76
NIC96YFR002W YGR122WP53272 402 aa4.04□□□□□ -1.76
NIC96YFR002W AVO1Q08236 1176 aa4.04□□□□□ -1.76
NIC96YFR002W GLT1Q12680 2145 aaKnown RBP4.04□□□□□ -1.76
NIC96YFR002W VMA4P22203 233 aaKnown RBP4.04□□□□□ -1.76
NIC96YFR002W LIP5P32875 414 aa4.04□□□□□ -1.76
NIC96YFR002W MTR4P47047 1073 aaKnown RBP4.04□□□□□ -1.76
NIC96YFR002W SDH1Q00711 640 aa4.04□□□□□ -1.76
NIC96YFR002W NFS1P25374 497 aa4.03□□□□□ -1.76
NIC96YFR002W OYE3P41816 400 aaPredicted RBP4.03□□□□□ -1.76
NIC96YFR002W XKS1P42826 600 aa4.03□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms