RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W ALA1P40825 983 aaKnown RBP6.23□□□□□ -1.41
UBP9YER098W ISW1P38144 1129 aa6.22□□□□□ -1.41
UBP9YER098W OSH2Q12451 1283 aa6.22□□□□□ -1.41
UBP9YER098W NOP14Q99207 810 aaKnown RBP6.22□□□□□ -1.41
UBP9YER098W TSC11P40061 1430 aa6.22□□□□□ -1.41
UBP9YER098W GAL11P19659 1081 aa6.22□□□□□ -1.41
UBP9YER098W DJP1P40564 432 aa6.22□□□□□ -1.41
UBP9YER098W XKS1P42826 600 aa6.22□□□□□ -1.41
UBP9YER098W SPO75Q07798 868 aa6.22□□□□□ -1.41
UBP9YER098W SMC4Q12267 1418 aa6.21□□□□□ -1.41
UBP9YER098W QCR6P00127 147 aa6.21□□□□□ -1.42
UBP9YER098W ROX1P25042 368 aa6.21□□□□□ -1.42
UBP9YER098W GRX7P38068 203 aa6.21□□□□□ -1.42
UBP9YER098W GIP1P38229 639 aa6.21□□□□□ -1.42
UBP9YER098W PMC1P38929 1173 aaPredicted RBP6.21□□□□□ -1.42
UBP9YER098W RPS0BP46654 252 aaKnown RBP6.21□□□□□ -1.42
UBP9YER098W YGR130CP53278 816 aa6.21□□□□□ -1.42
UBP9YER098W YCF1P39109 1515 aaKnown RBP6.21□□□□□ -1.42
UBP9YER098W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
UBP9YER098W NAB2P32505 525 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
UBP9YER098W NUT1P53114 1132 aa6.2□□□□□ -1.42
UBP9YER098W ADR1P07248 1323 aa6.2□□□□□ -1.42
UBP9YER098W CAN1P04817 590 aa6.2□□□□□ -1.42
UBP9YER098W DUR3P33413 735 aa6.2□□□□□ -1.42
UBP9YER098W ECM2P38241 364 aaKnown RBP6.2□□□□□ -1.42
UBP9YER098W FKH1P40466 484 aa6.2□□□□□ -1.42
UBP9YER098W TMA46Q12000 345 aaKnown RBP6.2□□□□□ -1.42
UBP9YER098W SNQ2P32568 1501 aaKnown RBP6.19□□□□□ -1.42
UBP9YER098W HSP60P19882 572 aaKnown RBP6.19□□□□□ -1.42
UBP9YER098W RPL8BP29453 256 aaKnown RBP6.19□□□□□ -1.42
UBP9YER098W KAP122P32767 1081 aa6.19□□□□□ -1.42
UBP9YER098W GEA1P47102 1408 aaPredicted RBP6.19□□□□□ -1.42
UBP9YER098W MRF1P30775 413 aaPredicted RBP6.19□□□□□ -1.42
UBP9YER098W PAF1P38351 445 aa6.19□□□□□ -1.42
UBP9YER098W AIM46P38885 310 aa6.19□□□□□ -1.42
UBP9YER098W KRE33P53914 1056 aaKnown RBP6.19□□□□□ -1.42
UBP9YER098W ESC2Q06340 456 aa6.19□□□□□ -1.42
UBP9YER098W YOR296WQ08748 1289 aa6.19□□□□□ -1.42
UBP9YER098W YBR287WP38355 427 aa6.18□□□□□ -1.42
UBP9YER098W GGA2P38817 585 aaKnown RBP6.18□□□□□ -1.42
UBP9YER098W SLN1P39928 1220 aaPredicted RBP6.18□□□□□ -1.42
UBP9YER098W RSM26P47141 266 aa6.18□□□□□ -1.42
UBP9YER098W GNP1P48813 663 aa6.18□□□□□ -1.42
UBP9YER098W ZDS1P50111 915 aaKnown RBP6.18□□□□□ -1.42
UBP9YER098W YNR029CP53729 429 aaKnown RBP6.18□□□□□ -1.42
UBP9YER098W EMG1Q06287 252 aaKnown RBP6.18□□□□□ -1.42
UBP9YER098W MYO4P32492 1471 aa6.18□□□□□ -1.42
UBP9YER098W CIT1P00890 479 aa6.18□□□□□ -1.42
UBP9YER098W RPS31P05759 152 aaKnown RBP6.18□□□□□ -1.42
UBP9YER098W SDH2P21801 266 aa6.18□□□□□ -1.42
UBP9YER098W ABD1P32783 436 aaPredicted RBP6.18□□□□□ -1.42
UBP9YER098W SQT1P35184 431 aa6.18□□□□□ -1.42
UBP9YER098W SHM1P37292 490 aaPredicted RBP6.18□□□□□ -1.42
UBP9YER098W JJJ2P46997 583 aa6.18□□□□□ -1.42
UBP9YER098W FOL1P53848 824 aa6.18□□□□□ -1.42
UBP9YER098W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
UBP9YER098W MSH6Q03834 1242 aa6.18□□□□□ -1.42
UBP9YER098W NTG2Q08214 380 aa6.18□□□□□ -1.42
UBP9YER098W DNA2P38859 1522 aa6.18□□□□□ -1.42
UBP9YER098W KOG1P38873 1557 aa6.17□□□□□ -1.42
UBP9YER098W MMS1Q06211 1407 aa6.17□□□□□ -1.42
UBP9YER098W TRP2P00899 507 aaKnown RBP6.17□□□□□ -1.42
UBP9YER098W RAD27P26793 382 aa6.17□□□□□ -1.42
UBP9YER098W SEA4P38164 1038 aa6.17□□□□□ -1.42
UBP9YER098W PRE3P38624 215 aa6.17□□□□□ -1.42
UBP9YER098W SSN3P39073 555 aa6.17□□□□□ -1.42
UBP9YER098W RVS167P39743 482 aaKnown RBP6.17□□□□□ -1.42
UBP9YER098W YTA6P40328 754 aa6.17□□□□□ -1.42
UBP9YER098W FMP25Q08023 583 aa6.17□□□□□ -1.42
UBP9YER098W RKR1Q04781 1562 aa6.17□□□□□ -1.42
UBP9YER098W RPL8AP17076 256 aaKnown RBP6.16□□□□□ -1.42
UBP9YER098W AGP1P25376 633 aa6.16□□□□□ -1.42
UBP9YER098W PYC2P32327 1180 aaKnown RBP6.16□□□□□ -1.42
UBP9YER098W PFD1P46988 109 aa6.16□□□□□ -1.42
UBP9YER098W TPO2P53283 614 aa6.16□□□□□ -1.42
UBP9YER098W SWR1Q05471 1514 aa6.16□□□□□ -1.42
UBP9YER098W VBA5P36172 582 aa6.16□□□□□ -1.42
UBP9YER098W EAF1Q06337 982 aa6.16□□□□□ -1.42
UBP9YER098W MHP1P43638 1398 aa6.16□□□□□ -1.42
UBP9YER098W ARE1P25628 610 aa6.15□□□□□ -1.42
UBP9YER098W IRR1P40541 1150 aa6.15□□□□□ -1.42
UBP9YER098W ERP6P53198 216 aa6.15□□□□□ -1.42
UBP9YER098W ENV11P53246 860 aa6.15□□□□□ -1.42
UBP9YER098W SHE9Q04172 456 aa6.15□□□□□ -1.42
UBP9YER098W HDA2Q06629 674 aa6.15□□□□□ -1.42
UBP9YER098W YOR1P53049 1477 aa6.15□□□□□ -1.42
UBP9YER098W PDR15Q04182 1529 aaKnown RBP6.15□□□□□ -1.42
UBP9YER098W SBP1P10080 294 aaKnown RBP6.15□□□□□ -1.43
UBP9YER098W MSH2P25847 964 aa6.15□□□□□ -1.43
UBP9YER098W SEC6P32844 805 aa6.15□□□□□ -1.43
UBP9YER098W MRP8P35719 219 aa6.15□□□□□ -1.43
UBP9YER098W SPO20Q04359 397 aa6.15□□□□□ -1.43
UBP9YER098W SFP1P32432 683 aa6.14□□□□□ -1.43
UBP9YER098W PEX28P38848 579 aa6.14□□□□□ -1.43
UBP9YER098W RGA1P39083 1007 aa6.14□□□□□ -1.43
UBP9YER098W RTA1P53047 317 aa6.14□□□□□ -1.43
UBP9YER098W PEX13P80667 386 aa6.14□□□□□ -1.43
UBP9YER098W YLR225CQ05948 407 aaKnown RBP6.14□□□□□ -1.43
UBP9YER098W SBA1P28707 216 aaKnown RBP6.13□□□□□ -1.43
UBP9YER098W HUL4P40985 892 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms