RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C DAL1P32375 460 aa1.8□□□□□ -2.12
SEC3YER008C COQ2P32378 372 aa1.8□□□□□ -2.12
SEC3YER008C HXT5P38695 592 aa1.8□□□□□ -2.12
SEC3YER008C SHU2P38957 223 aa1.8□□□□□ -2.12
SEC3YER008C YOR296WQ08748 1289 aa1.8□□□□□ -2.12
SEC3YER008C TIF6Q12522 245 aaKnown RBP1.8□□□□□ -2.12
SEC3YER008C NFS1P25374 497 aa1.8□□□□□ -2.12
SEC3YER008C PET112P33893 541 aa1.8□□□□□ -2.12
SEC3YER008C MCM7P38132 845 aa1.8□□□□□ -2.12
SEC3YER008C APM2P38700 605 aa1.8□□□□□ -2.12
SEC3YER008C TED1P40533 473 aa1.8□□□□□ -2.12
SEC3YER008C YPQ2Q06328 317 aa1.8□□□□□ -2.12
SEC3YER008C NSI1Q12457 570 aa1.8□□□□□ -2.12
SEC3YER008C PRI2P20457 528 aa1.8□□□□□ -2.12
SEC3YER008C SWE1P32944 819 aa1.8□□□□□ -2.12
SEC3YER008C FET4P40988 552 aa1.8□□□□□ -2.12
SEC3YER008C YNR040WP53736 256 aa1.8□□□□□ -2.12
SEC3YER008C TOS4Q06266 489 aa1.8□□□□□ -2.12
SEC3YER008C CLN2P20438 545 aa1.79□□□□□ -2.12
SEC3YER008C DIT1P21623 536 aa1.79□□□□□ -2.12
SEC3YER008C NSG2P53898 299 aa1.79□□□□□ -2.12
SEC3YER008C YCS4Q06156 1176 aa1.79□□□□□ -2.12
SEC3YER008C BUD21Q08492 214 aaPredicted RBP1.79□□□□□ -2.12
SEC3YER008C TY1A-DR3Q12441 440 aa1.79□□□□□ -2.12
SEC3YER008C ARO1P08566 1588 aaKnown RBP1.79□□□□□ -2.12
SEC3YER008C YBT1P32386 1661 aa1.79□□□□□ -2.12
SEC3YER008C CIT2P08679 460 aa1.79□□□□□ -2.12
SEC3YER008C BAS1P22035 811 aa1.79□□□□□ -2.12
SEC3YER008C PPG1P32838 368 aa1.79□□□□□ -2.12
SEC3YER008C MTR4P47047 1073 aaKnown RBP1.79□□□□□ -2.12
SEC3YER008C UTP4Q06679 776 aaKnown RBP1.79□□□□□ -2.12
SEC3YER008C LEU1P07264 779 aaKnown RBP1.79□□□□□ -2.12
SEC3YER008C SAC7P17121 654 aa1.79□□□□□ -2.12
SEC3YER008C RTS3P53289 263 aa1.79□□□□□ -2.12
SEC3YER008C ESF1Q06344 628 aaKnown RBP1.79□□□□□ -2.12
SEC3YER008C FAL1Q12099 399 aaKnown RBP1.79□□□□□ -2.12
SEC3YER008C TY1A-BLQ12266 440 aa1.79□□□□□ -2.12
SEC3YER008C PRP40P33203 583 aaKnown RBP1.78□□□□□ -2.12
SEC3YER008C PPX1P38698 397 aa1.78□□□□□ -2.12
SEC3YER008C NUG1P40010 520 aaKnown RBP1.78□□□□□ -2.12
SEC3YER008C NTA1P40354 457 aa1.78□□□□□ -2.12
SEC3YER008C NAM8Q00539 523 aaKnown RBP1.78□□□□□ -2.12
SEC3YER008C HEH2Q03281 663 aa1.78□□□□□ -2.12
SEC3YER008C TY1A-MR1Q04215 440 aa1.78□□□□□ -2.12
SEC3YER008C YOR352WQ08816 343 aa1.78□□□□□ -2.12
SEC3YER008C YOR131CQ12486 218 aa1.78□□□□□ -2.12
SEC3YER008C POL1P13382 1468 aa1.78□□□□□ -2.12
SEC3YER008C CHD1P32657 1468 aa1.78□□□□□ -2.12
SEC3YER008C MET4P32389 672 aa1.78□□□□□ -2.12
SEC3YER008C VPS35P34110 944 aa1.78□□□□□ -2.12
SEC3YER008C PMT7Q06644 662 aa1.78□□□□□ -2.12
SEC3YER008C MNL2Q12205 849 aa1.78□□□□□ -2.12
SEC3YER008C AI1P03875 834 aa1.78□□□□□ -2.12
SEC3YER008C PAN1P32521 1480 aa1.78□□□□□ -2.12
SEC3YER008C HSE1P38753 452 aa1.78□□□□□ -2.12
SEC3YER008C XKS1P42826 600 aa1.78□□□□□ -2.12
SEC3YER008C LSB6P42951 607 aa1.78□□□□□ -2.12
SEC3YER008C CDC55Q00362 526 aa1.78□□□□□ -2.12
SEC3YER008C UBP3Q01477 912 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
SEC3YER008C GPI13Q07830 1017 aa1.78□□□□□ -2.12
SEC3YER008C PDR12Q02785 1511 aa1.78□□□□□ -2.12
SEC3YER008C YOR093CQ12275 1648 aa1.77□□□□□ -2.13
SEC3YER008C SEC23P15303 768 aaKnown RBP1.77□□□□□ -2.13
SEC3YER008C PYC2P32327 1180 aaKnown RBP1.77□□□□□ -2.13
SEC3YER008C TAT1P38085 619 aa1.77□□□□□ -2.13
SEC3YER008C AKR1P39010 764 aa1.77□□□□□ -2.13
SEC3YER008C LYS5P50113 272 aa1.77□□□□□ -2.13
SEC3YER008C TPO2P53283 614 aa1.77□□□□□ -2.13
SEC3YER008C SPO20Q04359 397 aa1.77□□□□□ -2.13
SEC3YER008C ALG6Q12001 544 aaKnown RBP1.77□□□□□ -2.13
SEC3YER008C SRP40P32583 406 aaPredicted RBP1.77□□□□□ -2.13
SEC3YER008C YIL165CP40446 119 aa1.77□□□□□ -2.13
SEC3YER008C GDE1Q02979 1223 aa1.77□□□□□ -2.13
SEC3YER008C UBX5Q06682 500 aa1.77□□□□□ -2.13
SEC3YER008C NHA1Q99271 985 aa1.77□□□□□ -2.13
SEC3YER008C HAP1P0CE41 1502 aa1.77□□□□□ -2.13
SEC3YER008C SBP1P10080 294 aaKnown RBP1.77□□□□□ -2.13
SEC3YER008C RPA135P22138 1203 aaKnown RBP1.77□□□□□ -2.13
SEC3YER008C SLA1P32790 1244 aa1.77□□□□□ -2.13
SEC3YER008C YKL091CP33324 310 aaKnown RBP1.77□□□□□ -2.13
SEC3YER008C MOT2P34909 587 aaKnown RBP1.77□□□□□ -2.13
SEC3YER008C GIP2P40036 548 aa1.77□□□□□ -2.13
SEC3YER008C PRK1P40494 810 aa1.77□□□□□ -2.13
SEC3YER008C KRI1P42846 591 aaKnown RBP1.77□□□□□ -2.13
SEC3YER008C DAK2P43550 591 aa1.77□□□□□ -2.13
SEC3YER008C TY1A-DR2Q03964 440 aaKnown RBP1.77□□□□□ -2.13
SEC3YER008C VTC4P47075 721 aa1.76□□□□□ -2.13
SEC3YER008C FOL2P51601 243 aaKnown RBP1.76□□□□□ -2.13
SEC3YER008C EMG1Q06287 252 aaKnown RBP1.76□□□□□ -2.13
SEC3YER008C RSB1Q08417 382 aa1.76□□□□□ -2.13
SEC3YER008C YLL054CQ12244 843 aa1.76□□□□□ -2.13
SEC3YER008C SNQ2P32568 1501 aaKnown RBP1.76□□□□□ -2.13
SEC3YER008C YOR1P53049 1477 aa1.76□□□□□ -2.13
SEC3YER008C MAE1P36013 669 aaKnown RBP1.76□□□□□ -2.13
SEC3YER008C PGM2P37012 569 aaKnown RBP1.76□□□□□ -2.13
SEC3YER008C REI1P38344 393 aaPredicted RBP1.76□□□□□ -2.13
SEC3YER008C RRM3P38766 723 aa1.76□□□□□ -2.13
SEC3YER008C PEX28P38848 579 aa1.76□□□□□ -2.13
SEC3YER008C ITC1P53125 1264 aa1.76□□□□□ -2.13
SEC3YER008C ELA1P53861 379 aaPredicted RBP1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 67.6 ms