RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF1	YDR477W	MIC19	P43594	170 aa		11.25	□□□□□ -0.61
SNF1	YDR477W	ERG5	P54781	538 aa		11.25	□□□□□ -0.61
SNF1	YDR477W	KAR5	Q04746	504 aa		11.25	□□□□□ -0.61
SNF1	YDR477W	SPN1	Q06505	410 aa	Predicted RBP	11.25	□□□□□ -0.61
SNF1	YDR477W	VAC14	Q06708	880 aa		11.25	□□□□□ -0.61
SNF1	YDR477W	HMI1	Q12039	706 aa		11.25	□□□□□ -0.61
SNF1	YDR477W	GET3	Q12154	354 aa	Known RBP	11.25	□□□□□ -0.61
SNF1	YDR477W	SMF1	P38925	575 aa		11.24	□□□□□ -0.61
SNF1	YDR477W	MCX1	P38323	520 aa	Predicted RBP	11.23	□□□□□ -0.61
SNF1	YDR477W	SPT8	P38915	602 aa		11.23	□□□□□ -0.61
SNF1	YDR477W	EFM4	P40516	257 aa		11.23	□□□□□ -0.61
SNF1	YDR477W	ENV11	P53246	860 aa		11.23	□□□□□ -0.61
SNF1	YDR477W	PPM2	Q08282	695 aa		11.23	□□□□□ -0.61
SNF1	YDR477W	OSH2	Q12451	1283 aa		11.23	□□□□□ -0.61
SNF1	YDR477W	PTC4	P38089	393 aa		11.22	□□□□□ -0.61
SNF1	YDR477W	EFM2	P38347	419 aa		11.22	□□□□□ -0.61
SNF1	YDR477W	HAL5	P38970	855 aa	Known RBP	11.22	□□□□□ -0.61
SNF1	YDR477W	YGR237C	P50089	785 aa		11.22	□□□□□ -0.61
SNF1	YDR477W	RUD3	Q12234	484 aa	Known RBP	11.22	□□□□□ -0.61
SNF1	YDR477W	PTC5	Q12511	572 aa		11.22	□□□□□ -0.61
SNF1	YDR477W	CDC37	P06101	506 aa	Known RBP	11.21	□□□□□ -0.61
SNF1	YDR477W	DAL7	P21826	554 aa		11.21	□□□□□ -0.61
SNF1	YDR477W	SHQ1	P40486	507 aa	Predicted RBP	11.21	□□□□□ -0.61
SNF1	YDR477W	LSC2	P53312	427 aa		11.21	□□□□□ -0.61
SNF1	YDR477W	FAR11	P53917	953 aa		11.21	□□□□□ -0.61
SNF1	YDR477W	HDA1	P53973	706 aa		11.21	□□□□□ -0.61
SNF1	YDR477W	RRI2	Q12348	645 aa		11.21	□□□□□ -0.61
SNF1	YDR477W	ADR1	P07248	1323 aa		11.21	□□□□□ -0.61
SNF1	YDR477W	SAC3	P46674	1301 aa		11.21	□□□□□ -0.61
SNF1	YDR477W	MTF2	P10849	440 aa		11.21	□□□□□ -0.62
SNF1	YDR477W	BMH1	P29311	267 aa	Known RBP	11.21	□□□□□ -0.62
SNF1	YDR477W	CTM1	P38818	585 aa		11.21	□□□□□ -0.62
SNF1	YDR477W	YJR079W	P47126	109 aa		11.21	□□□□□ -0.62
SNF1	YDR477W	ALD2	P47771	506 aa		11.21	□□□□□ -0.62
SNF1	YDR477W	CSC1	Q06538	782 aa		11.21	□□□□□ -0.62
SNF1	YDR477W	RRP6	Q12149	733 aa	Known RBP	11.21	□□□□□ -0.62
SNF1	YDR477W	RMP1	Q12530	201 aa		11.21	□□□□□ -0.62
SNF1	YDR477W	RIM15	P43565	1770 aa		11.2	□□□□□ -0.62
SNF1	YDR477W	RAD1	P06777	1100 aa		11.2	□□□□□ -0.62
SNF1	YDR477W	BMH2	P34730	273 aa	Known RBP	11.2	□□□□□ -0.62
SNF1	YDR477W	MMR1	Q06324	491 aa		11.2	□□□□□ -0.62
SNF1	YDR477W	SDH5	Q08230	162 aa		11.2	□□□□□ -0.62
SNF1	YDR477W	SPO12	P17123	173 aa		11.19	□□□□□ -0.62
SNF1	YDR477W	RAD53	P22216	821 aa		11.19	□□□□□ -0.62
SNF1	YDR477W	SPO11	P23179	398 aa		11.19	□□□□□ -0.62
SNF1	YDR477W	RAD57	P25301	460 aa		11.19	□□□□□ -0.62
SNF1	YDR477W	PAP1	P29468	568 aa	Known RBP	11.19	□□□□□ -0.62
SNF1	YDR477W	BYE1	P36106	594 aa		11.19	□□□□□ -0.62
SNF1	YDR477W	FYV8	P46949	817 aa	Known RBP	11.19	□□□□□ -0.62
SNF1	YDR477W	EBS1	Q03466	884 aa	Known RBP	11.19	□□□□□ -0.62
SNF1	YDR477W	CHO2	P05374	869 aa	Known RBP	11.19	□□□□□ -0.62
SNF1	YDR477W	COQ1	P18900	473 aa		11.19	□□□□□ -0.62
SNF1	YDR477W	MCM3	P24279	971 aa	Known RBP	11.19	□□□□□ -0.62
SNF1	YDR477W	SWH1	P35845	1188 aa		11.19	□□□□□ -0.62
SNF1	YDR477W	PTP3	P40048	928 aa		11.19	□□□□□ -0.62
SNF1	YDR477W	PTK2	P47116	818 aa	Known RBP	11.19	□□□□□ -0.62
SNF1	YDR477W	VTC3	Q02725	835 aa		11.19	□□□□□ -0.62
SNF1	YDR477W	PHM7	Q12252	991 aa		11.19	□□□□□ -0.62
SNF1	YDR477W	GRX7	P38068	203 aa		11.18	□□□□□ -0.62
SNF1	YDR477W	NGL3	Q03210	505 aa		11.18	□□□□□ -0.62
SNF1	YDR477W	PRP3	Q03338	469 aa	Predicted RBP	11.18	□□□□□ -0.62
SNF1	YDR477W	YKL133C	P36066	463 aa		11.17	□□□□□ -0.62
SNF1	YDR477W	MIP6	P38760	659 aa	Known RBP	11.17	□□□□□ -0.62
SNF1	YDR477W	HFM1	P51979	1187 aa		11.17	□□□□□ -0.62
SNF1	YDR477W	NOP6	Q07623	225 aa	Known RBP	11.17	□□□□□ -0.62
SNF1	YDR477W	YLR001C	Q07895	862 aa		11.17	□□□□□ -0.62
SNF1	YDR477W	PSR2	Q07949	397 aa		11.17	□□□□□ -0.62
SNF1	YDR477W	RPT3	P33298	428 aa	Known RBP	11.17	□□□□□ -0.62
SNF1	YDR477W	AIP1	P46680	615 aa	Known RBP	11.17	□□□□□ -0.62
SNF1	YDR477W	EIS1	Q05050	843 aa	Known RBP	11.17	□□□□□ -0.62
SNF1	YDR477W	YDR338C	Q05497	695 aa		11.17	□□□□□ -0.62
SNF1	YDR477W	TFC6	Q06339	672 aa		11.17	□□□□□ -0.62
SNF1	YDR477W	NUR1	Q12066	484 aa		11.17	□□□□□ -0.62
SNF1	YDR477W	POM152	P39685	1337 aa		11.17	□□□□□ -0.62
SNF1	YDR477W	IES2	P40154	320 aa		11.16	□□□□□ -0.62
SNF1	YDR477W	LYS14	P40971	790 aa		11.16	□□□□□ -0.62
SNF1	YDR477W	IRC8	P47046	822 aa		11.16	□□□□□ -0.62
SNF1	YDR477W	ENP2	P48234	707 aa	Known RBP	11.16	□□□□□ -0.62
SNF1	YDR477W	UME1	Q03010	460 aa		11.16	□□□□□ -0.62
SNF1	YDR477W	YLR287C	Q05881	355 aa		11.16	□□□□□ -0.62
SNF1	YDR477W	PSO2	P30620	661 aa		11.15	□□□□□ -0.62
SNF1	YDR477W	NFU1	P32860	256 aa		11.15	□□□□□ -0.62
SNF1	YDR477W	CNS1	P33313	385 aa		11.15	□□□□□ -0.62
SNF1	YDR477W	GLO3	P38682	493 aa	Known RBP	11.15	□□□□□ -0.62
SNF1	YDR477W	BCD1	P38772	366 aa		11.15	□□□□□ -0.62
SNF1	YDR477W	VPS8	P39702	1274 aa		11.15	□□□□□ -0.62
SNF1	YDR477W	TIF4632	P39936	914 aa	Known RBP	11.15	□□□□□ -0.62
SNF1	YDR477W	VFA1	P40080	203 aa		11.15	□□□□□ -0.62
SNF1	YDR477W	PRP16	P15938	1071 aa	Predicted RBP	11.14	□□□□□ -0.63
SNF1	YDR477W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	11.14	□□□□□ -0.63	RIP-Chip
SNF1	YDR477W	HIS4	P00815	799 aa	Known RBP	11.13	□□□□□ -0.63
SNF1	YDR477W	PIF1	P07271	859 aa		11.13	□□□□□ -0.63
SNF1	YDR477W	PCI8	P40512	444 aa		11.13	□□□□□ -0.63
SNF1	YDR477W	UFD2	P54860	961 aa		11.13	□□□□□ -0.63
SNF1	YDR477W	VPS72	Q03388	795 aa		11.13	□□□□□ -0.63
SNF1	YDR477W	UTP5	Q04177	643 aa	Known RBP	11.13	□□□□□ -0.63
SNF1	YDR477W	SPP382	Q06411	708 aa	Predicted RBP	11.13	□□□□□ -0.63
SNF1	YDR477W	NEW1	Q08972	1196 aa	Known RBP	11.13	□□□□□ -0.63
SNF1	YDR477W	TOM70	P07213	617 aa	Known RBP	11.13	□□□□□ -0.63
SNF1	YDR477W	SRP54	P20424	541 aa	Known RBP	11.13	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms