RNA–Protein interactions for RNA: YDR456W

NHX1, Transcript of Na+/H+ and K+/H+ exchanger, yeast

Gene NHX1, Length 1,902 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHX1	YDR456W	ACF4	P47129	309 aa		4.71	□□□□□ -1.66
NHX1	YDR456W	MCM16	Q12262	181 aa		4.71	□□□□□ -1.66
NHX1	YDR456W	SEC7	P11075	2009 aa	Known RBP	4.71	□□□□□ -1.66
NHX1	YDR456W	LYS2	P07702	1392 aa		4.7	□□□□□ -1.66
NHX1	YDR456W	TRM1	P15565	570 aa	Known RBP	4.7	□□□□□ -1.66
NHX1	YDR456W	SEC6	P32844	805 aa		4.7	□□□□□ -1.66
NHX1	YDR456W	NPL4	P33755	580 aa		4.7	□□□□□ -1.66
NHX1	YDR456W	FUI1	P38196	639 aa		4.7	□□□□□ -1.66
NHX1	YDR456W	RVS167	P39743	482 aa	Known RBP	4.7	□□□□□ -1.66
NHX1	YDR456W	EMP47	P43555	445 aa		4.7	□□□□□ -1.66
NHX1	YDR456W	TUB4	P53378	473 aa		4.7	□□□□□ -1.66
NHX1	YDR456W	MRS2	Q01926	470 aa		4.7	□□□□□ -1.66
NHX1	YDR456W	PRP3	Q03338	469 aa	Predicted RBP	4.7	□□□□□ -1.66
NHX1	YDR456W	TAP42	Q04372	366 aa		4.7	□□□□□ -1.66
NHX1	YDR456W	YML082W	Q04533	649 aa	Known RBP	4.7	□□□□□ -1.66
NHX1	YDR456W	PHO4	P07270	312 aa	Known RBP	4.7	□□□□□ -1.66
NHX1	YDR456W	TPM1	P17536	199 aa	Known RBP	4.7	□□□□□ -1.66
NHX1	YDR456W	SWI3	P32591	825 aa		4.7	□□□□□ -1.66
NHX1	YDR456W	MRPL10	P36520	322 aa		4.7	□□□□□ -1.66
NHX1	YDR456W	NUP192	P47054	1683 aa		4.69	□□□□□ -1.66
NHX1	YDR456W	SPT2	P06843	333 aa	Predicted RBP	4.69	□□□□□ -1.66
NHX1	YDR456W	PET111	P08468	800 aa		4.69	□□□□□ -1.66
NHX1	YDR456W	MIP1	P15801	1254 aa		4.69	□□□□□ -1.66
NHX1	YDR456W	YEF3	P16521	1044 aa	Known RBP	4.69	□□□□□ -1.66
NHX1	YDR456W	PDI1	P17967	522 aa	Known RBP	4.69	□□□□□ -1.66
NHX1	YDR456W	TOA1	P32773	286 aa		4.69	□□□□□ -1.66
NHX1	YDR456W	DLD1	P32891	587 aa		4.69	□□□□□ -1.66
NHX1	YDR456W	GLO3	P38682	493 aa	Known RBP	4.69	□□□□□ -1.66
NHX1	YDR456W	YEN1	P40028	759 aa		4.69	□□□□□ -1.66
NHX1	YDR456W	RRT14	P40470	206 aa		4.69	□□□□□ -1.66
NHX1	YDR456W	PEX14	P53112	341 aa		4.69	□□□□□ -1.66
NHX1	YDR456W	PAP2	P53632	584 aa	Known RBP	4.69	□□□□□ -1.66
NHX1	YDR456W	GCR2	Q01722	534 aa		4.69	□□□□□ -1.66
NHX1	YDR456W	CDC53	Q12018	815 aa	Known RBP	4.69	□□□□□ -1.66
NHX1	YDR456W	PET123	P17558	318 aa		4.68	□□□□□ -1.66
NHX1	YDR456W	CDC11	P32458	415 aa		4.68	□□□□□ -1.66
NHX1	YDR456W	PAC1	P39946	494 aa	Known RBP	4.68	□□□□□ -1.66
NHX1	YDR456W	YJL049W	P47048	450 aa		4.68	□□□□□ -1.66
NHX1	YDR456W	ACS2	P52910	683 aa	Known RBP	4.68	□□□□□ -1.66
NHX1	YDR456W	TAN1	P53072	289 aa	Predicted RBP	4.68	□□□□□ -1.66
NHX1	YDR456W	CWC22	P53333	577 aa	Known RBP	4.68	□□□□□ -1.66
NHX1	YDR456W	HEF3	P53978	1044 aa	Known RBP	4.68	□□□□□ -1.66
NHX1	YDR456W	TAF8	Q03750	510 aa		4.68	□□□□□ -1.66
NHX1	YDR456W	GIR2	Q03768	265 aa	Predicted RBP	4.68	□□□□□ -1.66
NHX1	YDR456W	TOS4	Q06266	489 aa		4.68	□□□□□ -1.66
NHX1	YDR456W	SRP54	P20424	541 aa	Known RBP	4.68	□□□□□ -1.66
NHX1	YDR456W	ERP2	P39704	215 aa		4.68	□□□□□ -1.66
NHX1	YDR456W	RIO2	P40160	425 aa	Known RBP	4.68	□□□□□ -1.66
NHX1	YDR456W	CIR1	P42940	261 aa		4.68	□□□□□ -1.66
NHX1	YDR456W	HUL5	P53119	910 aa		4.68	□□□□□ -1.66
NHX1	YDR456W	NAF1	P53919	492 aa	Known RBP	4.68	□□□□□ -1.66
NHX1	YDR456W	YGR161W-C	Q3E744	92 aa		4.68	□□□□□ -1.66
NHX1	YDR456W	BCK1	Q01389	1478 aa		4.67	□□□□□ -1.66
NHX1	YDR456W	PRT1	P06103	763 aa	Known RBP	4.67	□□□□□ -1.66
NHX1	YDR456W	RTT107	P38850	1070 aa		4.67	□□□□□ -1.66
NHX1	YDR456W	DAK2	P43550	591 aa		4.67	□□□□□ -1.66
NHX1	YDR456W	FOL1	P53848	824 aa		4.67	□□□□□ -1.66
NHX1	YDR456W	NKP2	Q06162	153 aa		4.67	□□□□□ -1.66
NHX1	YDR456W	THI22	Q06490	572 aa		4.67	□□□□□ -1.66
NHX1	YDR456W	MET6	P05694	767 aa	Known RBP	4.66	□□□□□ -1.66
NHX1	YDR456W	KAR1	P11927	433 aa		4.66	□□□□□ -1.66
NHX1	YDR456W	GRX1	P25373	110 aa	Known RBP	4.66	□□□□□ -1.66
NHX1	YDR456W	NFU1	P32860	256 aa		4.66	□□□□□ -1.66
NHX1	YDR456W	RPT1	P33299	467 aa	Known RBP	4.66	□□□□□ -1.66
NHX1	YDR456W	NUP82	P40368	713 aa		4.66	□□□□□ -1.66
NHX1	YDR456W	RRN7	P40992	514 aa		4.66	□□□□□ -1.66
NHX1	YDR456W	YGL081W	P53156	320 aa		4.66	□□□□□ -1.66
NHX1	YDR456W	ARD1	P07347	238 aa	Predicted RBP	4.66	□□□□□ -1.66
NHX1	YDR456W	SDH2	P21801	266 aa		4.66	□□□□□ -1.66
NHX1	YDR456W	TRX2	P22803	104 aa	Known RBP	4.66	□□□□□ -1.66
NHX1	YDR456W	PHO87	P25360	923 aa		4.66	□□□□□ -1.66
NHX1	YDR456W	SUV3	P32580	737 aa		4.66	□□□□□ -1.66
NHX1	YDR456W	YHR020W	P38708	688 aa	Known RBP	4.66	□□□□□ -1.66
NHX1	YDR456W	TFG2	P41896	400 aa	Predicted RBP	4.66	□□□□□ -1.66
NHX1	YDR456W	PEX8	P53248	589 aa		4.66	□□□□□ -1.66
NHX1	YDR456W	TMA64	Q04600	565 aa	Known RBP	4.66	□□□□□ -1.66
NHX1	YDR456W	HRQ1	Q05549	1077 aa		4.66	□□□□□ -1.66
NHX1	YDR456W	YOR378W	Q08902	515 aa		4.66	□□□□□ -1.66
NHX1	YDR456W	WRS1	Q12109	432 aa	Known RBP	4.66	□□□□□ -1.66
NHX1	YDR456W	PSK1	P31374	1356 aa		4.66	□□□□□ -1.66
NHX1	YDR456W	PWP2	P25635	923 aa	Known RBP	4.65	□□□□□ -1.67
NHX1	YDR456W	ELM1	P32801	640 aa		4.65	□□□□□ -1.67
NHX1	YDR456W	TIM23	P32897	222 aa		4.65	□□□□□ -1.67
NHX1	YDR456W	VRP1	P37370	817 aa		4.65	□□□□□ -1.67
NHX1	YDR456W	RFC1	P38630	861 aa	Known RBP	4.65	□□□□□ -1.67
NHX1	YDR456W	MAM1	P40065	302 aa		4.65	□□□□□ -1.67
NHX1	YDR456W	MAD1	P40957	749 aa		4.65	□□□□□ -1.67
NHX1	YDR456W	PUS6	P53294	404 aa		4.65	□□□□□ -1.67
NHX1	YDR456W	KRE33	P53914	1056 aa	Known RBP	4.65	□□□□□ -1.67
NHX1	YDR456W	VPS20	Q04272	221 aa		4.65	□□□□□ -1.67
NHX1	YDR456W	ESF1	Q06344	628 aa	Known RBP	4.65	□□□□□ -1.67
NHX1	YDR456W	YDL206W	Q12424	762 aa		4.65	□□□□□ -1.67
NHX1	YDR456W	YOL087C	Q99247	1116 aa		4.65	□□□□□ -1.67
NHX1	YDR456W	AUS1	Q08409	1394 aa		4.65	□□□□□ -1.67
NHX1	YDR456W	THS1	P04801	734 aa	Known RBP	4.64	□□□□□ -1.67
NHX1	YDR456W	RAD27	P26793	382 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	HSP104	P31539	908 aa	Known RBP	4.64	□□□□□ -1.67
NHX1	YDR456W	ZUO1	P32527	433 aa	Known RBP	4.64	□□□□□ -1.67
NHX1	YDR456W	RRP1	P35178	278 aa	Predicted RBP	4.64	□□□□□ -1.67
NHX1	YDR456W	YNG2	P38806	282 aa	Known RBP	4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms