RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W INP52P50942 1183 aa7.28□□□□□ -1.24
RRP17YDR412W YMR074CQ04773 145 aa7.28□□□□□ -1.24
RRP17YDR412W ALG6Q12001 544 aaKnown RBP7.28□□□□□ -1.24
RRP17YDR412W MCM5P29496 775 aaKnown RBP7.27□□□□□ -1.25
RRP17YDR412W GPT2P36148 743 aa7.27□□□□□ -1.25
RRP17YDR412W DAK2P43550 591 aa7.27□□□□□ -1.25
RRP17YDR412W YGR130CP53278 816 aa7.27□□□□□ -1.25
RRP17YDR412W KAE1P36132 386 aa7.26□□□□□ -1.25
RRP17YDR412W SEA4P38164 1038 aa7.26□□□□□ -1.25
RRP17YDR412W STM1P39015 273 aaKnown RBP7.26□□□□□ -1.25
RRP17YDR412W SAM37P50110 327 aa7.26□□□□□ -1.25
RRP17YDR412W PMT7Q06644 662 aa7.26□□□□□ -1.25
RRP17YDR412W EXO5P38289 585 aa7.25□□□□□ -1.25
RRP17YDR412W CTH1P47976 325 aa7.25□□□□□ -1.25
RRP17YDR412W UTP22P53254 1237 aaPredicted RBP7.25□□□□□ -1.25
RRP17YDR412W FAR11P53917 953 aa7.25□□□□□ -1.25
RRP17YDR412W PRP40P33203 583 aaKnown RBP7.24□□□□□ -1.25
RRP17YDR412W OMA1P36163 345 aa7.24□□□□□ -1.25
RRP17YDR412W DOT1Q04089 582 aaKnown RBP7.24□□□□□ -1.25
RRP17YDR412W YCS4Q06156 1176 aa7.24□□□□□ -1.25
RRP17YDR412W YOR223WQ12015 292 aa7.24□□□□□ -1.25
RRP17YDR412W THI12P42883 340 aa7.23□□□□□ -1.25
RRP17YDR412W SLS1P42900 643 aa7.23□□□□□ -1.25
RRP17YDR412W THI5P43534 340 aa7.23□□□□□ -1.25
RRP17YDR412W THI11P47183 340 aa7.23□□□□□ -1.25
RRP17YDR412W GCV1P48015 400 aa7.23□□□□□ -1.25
RRP17YDR412W THI13Q07748 340 aa7.23□□□□□ -1.25
RRP17YDR412W CHS2P14180 963 aa7.22□□□□□ -1.25
RRP17YDR412W NEM1P38757 446 aa7.22□□□□□ -1.25
RRP17YDR412W CIC1P38779 376 aaKnown RBP7.22□□□□□ -1.25
RRP17YDR412W FAA3P39002 694 aa7.22□□□□□ -1.25
RRP17YDR412W RVS167P39743 482 aaKnown RBP7.22□□□□□ -1.25
RRP17YDR412W MEC3Q02574 474 aa7.22□□□□□ -1.25
RRP17YDR412W EAR1Q03212 550 aa7.22□□□□□ -1.25
RRP17YDR412W YML020WQ03722 664 aa7.22□□□□□ -1.25
RRP17YDR412W DAL4Q04895 635 aa7.22□□□□□ -1.25
RRP17YDR412W TOS1P38288 455 aa7.21□□□□□ -1.26
RRP17YDR412W GIC2Q06648 383 aa7.21□□□□□ -1.26
RRP17YDR412W VPS35P34110 944 aa7.2□□□□□ -1.26
RRP17YDR412W WHI3P34761 661 aaKnown RBP7.2□□□□□ -1.26
RRP17YDR412W MAC1P35192 417 aa7.2□□□□□ -1.26
RRP17YDR412W REI1P38344 393 aaPredicted RBP7.2□□□□□ -1.26
RRP17YDR412W MED7Q08278 222 aa7.2□□□□□ -1.26
RRP17YDR412W GCD1P09032 578 aaPredicted RBP7.19□□□□□ -1.26
RRP17YDR412W ULP1Q02724 621 aa7.19□□□□□ -1.26
RRP17YDR412W HEM13P11353 328 aaKnown RBP7.18□□□□□ -1.26
RRP17YDR412W RPT1P33299 467 aaKnown RBP7.18□□□□□ -1.26
RRP17YDR412W SPO74P45819 413 aa7.18□□□□□ -1.26
RRP17YDR412W YGR045CP53229 120 aa7.18□□□□□ -1.26
RRP17YDR412W SDH1Q00711 640 aa7.18□□□□□ -1.26
RRP17YDR412W CYC7P00045 113 aa7.17□□□□□ -1.26
RRP17YDR412W ELA1P53861 379 aaPredicted RBP7.17□□□□□ -1.26
RRP17YDR412W NOG1Q02892 647 aaKnown RBP7.17□□□□□ -1.26
RRP17YDR412W ATE1P16639 503 aa7.16□□□□□ -1.26
RRP17YDR412W MSH4P40965 878 aaPredicted RBP7.16□□□□□ -1.26
RRP17YDR412W PEX13P80667 386 aa7.16□□□□□ -1.26
RRP17YDR412W MAG2Q06436 670 aaKnown RBP7.16□□□□□ -1.26
RRP17YDR412W NOP8Q08287 484 aaPredicted RBP7.16□□□□□ -1.26
RRP17YDR412W MSH3P25336 1018 aa7.15□□□□□ -1.26
RRP17YDR412W GCD6P32501 712 aaKnown RBP7.15□□□□□ -1.26
RRP17YDR412W HXK1P04806 485 aaKnown RBP7.14□□□□□ -1.27
RRP17YDR412W MSB1P21339 1137 aaKnown RBP7.14□□□□□ -1.27
RRP17YDR412W SEC20P28791 383 aa7.14□□□□□ -1.27
RRP17YDR412W PUB1P32588 453 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
RRP17YDR412W YPL109CQ02981 657 aa7.14□□□□□ -1.27
RRP17YDR412W BRE4Q07660 1125 aa7.14□□□□□ -1.27
RRP17YDR412W NMD3P38861 518 aaKnown RBP7.13□□□□□ -1.27
RRP17YDR412W PIC2P40035 300 aa7.13□□□□□ -1.27
RRP17YDR412W UTP5Q04177 643 aaKnown RBP7.13□□□□□ -1.27
RRP17YDR412W RPS4AP0CX35 261 aaKnown RBP7.12□□□□□ -1.27
RRP17YDR412W RPS4BP0CX36 261 aaKnown RBP7.12□□□□□ -1.27
RRP17YDR412W MCM2P29469 868 aa7.12□□□□□ -1.27
RRP17YDR412W LIP5P32875 414 aa7.12□□□□□ -1.27
RRP17YDR412W YKL077WP36081 392 aa7.12□□□□□ -1.27
RRP17YDR412W PEX28P38848 579 aa7.12□□□□□ -1.27
RRP17YDR412W MMM1P41800 426 aa7.12□□□□□ -1.27
RRP17YDR412W ALT1P52893 592 aa7.12□□□□□ -1.27
RRP17YDR412W RRP15Q06511 250 aaPredicted RBP7.12□□□□□ -1.27
RRP17YDR412W RSM26P47141 266 aa7.11□□□□□ -1.27
RRP17YDR412W YLL054CQ12244 843 aa7.11□□□□□ -1.27
RRP17YDR412W RDH54P38086 958 aa7.1□□□□□ -1.27
RRP17YDR412W OYE3P41816 400 aaPredicted RBP7.1□□□□□ -1.27
RRP17YDR412W XKS1P42826 600 aa7.1□□□□□ -1.27
RRP17YDR412W NFS1P25374 497 aa7.09□□□□□ -1.27
RRP17YDR412W ARL1P38116 183 aaKnown RBP7.09□□□□□ -1.27
RRP17YDR412W YGL140CP53120 1219 aa7.09□□□□□ -1.27
RRP17YDR412W ADI1Q03677 179 aa7.09□□□□□ -1.27
RRP17YDR412W FYV10P40492 516 aa7.08□□□□□ -1.28
RRP17YDR412W CIT3P43635 486 aa7.08□□□□□ -1.28
RRP17YDR412W POL32P47110 350 aa7.07□□□□□ -1.28
RRP17YDR412W RCM1P53972 490 aa7.07□□□□□ -1.28
RRP17YDR412W AVO1Q08236 1176 aa7.07□□□□□ -1.28
RRP17YDR412W OXR1Q08952 273 aa7.07□□□□□ -1.28
RRP17YDR412W KAR2P16474 682 aaKnown RBP7.06□□□□□ -1.28
RRP17YDR412W SMY2P32909 740 aaKnown RBP7.06□□□□□ -1.28
RRP17YDR412W LRG1P35688 1017 aa7.06□□□□□ -1.28
RRP17YDR412W SHU2P38957 223 aa7.06□□□□□ -1.28
RRP17YDR412W YAR028WP39548 234 aa7.06□□□□□ -1.28
RRP17YDR412W YNR063WP53749 607 aa7.06□□□□□ -1.28
RRP17YDR412W SPR28Q04921 423 aa7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms