RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W YHL008CP38750 627 aa6.76□□□□□ -1.33
SHE9YDR393W MSH4P40965 878 aaPredicted RBP6.76□□□□□ -1.33
SHE9YDR393W UTP22P53254 1237 aaPredicted RBP6.76□□□□□ -1.33
SHE9YDR393W RPL34AP87262 121 aaPredicted RBP6.76□□□□□ -1.33
SHE9YDR393W TRS120Q04183 1289 aa6.76□□□□□ -1.33
SHE9YDR393W ALG6Q12001 544 aaKnown RBP6.76□□□□□ -1.33
SHE9YDR393W SAP155P43612 1002 aa6.75□□□□□ -1.33
SHE9YDR393W ACF4P47129 309 aa6.75□□□□□ -1.33
SHE9YDR393W ALT1P52893 592 aa6.75□□□□□ -1.33
SHE9YDR393W YNL011CP53980 444 aa6.75□□□□□ -1.33
SHE9YDR393W BSC2Q05611 235 aa6.75□□□□□ -1.33
SHE9YDR393W FLP1P03870 423 aa6.74□□□□□ -1.33
SHE9YDR393W GAS1P22146 559 aaKnown RBP6.74□□□□□ -1.33
SHE9YDR393W REI1P38344 393 aaPredicted RBP6.74□□□□□ -1.33
SHE9YDR393W EAR1Q03212 550 aa6.74□□□□□ -1.33
SHE9YDR393W PRP43P53131 767 aaKnown RBP6.73□□□□□ -1.33
SHE9YDR393W CDC55Q00362 526 aa6.73□□□□□ -1.33
SHE9YDR393W CDA2Q06703 312 aa6.72□□□□□ -1.33
SHE9YDR393W TY1A-LR4P0C2I8 440 aaKnown RBP6.71□□□□□ -1.33
SHE9YDR393W TY1A-DR6P0CX70 440 aa6.71□□□□□ -1.33
SHE9YDR393W TY1A-ER1P0CX71 440 aa6.71□□□□□ -1.33
SHE9YDR393W TY1A-LR2P0CX72 440 aa6.71□□□□□ -1.33
SHE9YDR393W TY1A-PLP0CX73 440 aa6.71□□□□□ -1.33
SHE9YDR393W TY1A-JR1P0CX74 440 aa6.71□□□□□ -1.33
SHE9YDR393W TY1A-LR3P0CX75 440 aa6.71□□□□□ -1.33
SHE9YDR393W TY1A-ML2P0CX76 440 aa6.71□□□□□ -1.33
SHE9YDR393W TSA1P34760 196 aaKnown RBP6.71□□□□□ -1.33
SHE9YDR393W NUT1P53114 1132 aa6.71□□□□□ -1.33
SHE9YDR393W TY1A-GR1Q12085 440 aa6.71□□□□□ -1.33
SHE9YDR393W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.71□□□□□ -1.33
SHE9YDR393W TY1A-OLQ92392 440 aaKnown RBP6.71□□□□□ -1.33
SHE9YDR393W TRL1P09880 827 aaKnown RBP6.7□□□□□ -1.34
SHE9YDR393W YAF9P53930 226 aa6.7□□□□□ -1.34
SHE9YDR393W PMT7Q06644 662 aa6.7□□□□□ -1.34
SHE9YDR393W ADP1P25371 1049 aa6.69□□□□□ -1.34
SHE9YDR393W ORC3P54790 616 aa6.69□□□□□ -1.34
SHE9YDR393W TRE1Q08919 783 aa6.69□□□□□ -1.34
SHE9YDR393W YVC1Q12324 675 aa6.69□□□□□ -1.34
SHE9YDR393W NFS1P25374 497 aa6.69□□□□□ -1.34
SHE9YDR393W SMY2P32909 740 aaKnown RBP6.69□□□□□ -1.34
SHE9YDR393W PEX7P39108 375 aa6.69□□□□□ -1.34
SHE9YDR393W YGR045CP53229 120 aa6.69□□□□□ -1.34
SHE9YDR393W ELA1P53861 379 aaPredicted RBP6.69□□□□□ -1.34
SHE9YDR393W SSY1Q03770 852 aa6.69□□□□□ -1.34
SHE9YDR393W YCR015CP25616 317 aa6.68□□□□□ -1.34
SHE9YDR393W ARL1P38116 183 aaKnown RBP6.67□□□□□ -1.34
SHE9YDR393W INP54Q08227 384 aaKnown RBP6.67□□□□□ -1.34
SHE9YDR393W LPX1Q12405 387 aaKnown RBP6.67□□□□□ -1.34
SHE9YDR393W MCM5P29496 775 aaKnown RBP6.65□□□□□ -1.35
SHE9YDR393W PRO1P32264 428 aa6.65□□□□□ -1.35
SHE9YDR393W GRS1P38088 690 aaKnown RBP6.65□□□□□ -1.35
SHE9YDR393W ESC8Q08119 714 aa6.65□□□□□ -1.35
SHE9YDR393W YKL222CP35995 705 aa6.64□□□□□ -1.35
SHE9YDR393W NNK1P36003 928 aa6.64□□□□□ -1.35
SHE9YDR393W EXO5P38289 585 aa6.64□□□□□ -1.35
SHE9YDR393W MON1P53129 644 aa6.64□□□□□ -1.35
SHE9YDR393W GPI13Q07830 1017 aa6.64□□□□□ -1.35
SHE9YDR393W AVO1Q08236 1176 aa6.64□□□□□ -1.35
SHE9YDR393W FRT1Q99332 602 aa6.64□□□□□ -1.35
SHE9YDR393W THI80P35202 319 aa6.63□□□□□ -1.35
SHE9YDR393W MDJ2P42834 146 aa6.63□□□□□ -1.35
SHE9YDR393W SSA1P10591 642 aaKnown RBP6.62□□□□□ -1.35
SHE9YDR393W ERP5P38819 212 aa6.62□□□□□ -1.35
SHE9YDR393W RVS167P39743 482 aaKnown RBP6.62□□□□□ -1.35
SHE9YDR393W PTC7P38797 343 aa6.61□□□□□ -1.35
SHE9YDR393W SLS1P42900 643 aa6.61□□□□□ -1.35
SHE9YDR393W TAF1P46677 1066 aa6.61□□□□□ -1.35
SHE9YDR393W YKL077WP36081 392 aa6.6□□□□□ -1.35
SHE9YDR393W NEM1P38757 446 aa6.6□□□□□ -1.35
SHE9YDR393W NUT2Q06213 157 aa6.6□□□□□ -1.35
SHE9YDR393W PUS7Q08647 676 aaKnown RBP6.6□□□□□ -1.35
SHE9YDR393W NOC3Q07896 663 aaPredicted RBP6.59□□□□□ -1.35
SHE9YDR393W PRP6P19735 899 aaPredicted RBP6.58□□□□□ -1.36
SHE9YDR393W GTS1P40956 396 aa6.58□□□□□ -1.36
SHE9YDR393W TPP1Q03796 238 aa6.58□□□□□ -1.36
SHE9YDR393W YDL177CQ12257 170 aa6.58□□□□□ -1.36
SHE9YDR393W YBL113CQ7M4S9 792 aa6.58□□□□□ -1.36
SHE9YDR393W CDC3P32457 520 aaKnown RBP6.57□□□□□ -1.36
SHE9YDR393W SHU2P38957 223 aa6.57□□□□□ -1.36
SHE9YDR393W YAR028WP39548 234 aa6.56□□□□□ -1.36
SHE9YDR393W GIP4P39732 760 aa6.56□□□□□ -1.36
SHE9YDR393W SAM37P50110 327 aa6.56□□□□□ -1.36
SHE9YDR393W NOG1Q02892 647 aaKnown RBP6.56□□□□□ -1.36
SHE9YDR393W AIM3P38266 947 aaKnown RBP6.55□□□□□ -1.36
SHE9YDR393W NMD3P38861 518 aaKnown RBP6.55□□□□□ -1.36
SHE9YDR393W MRPL22P53881 309 aa6.55□□□□□ -1.36
SHE9YDR393W YCS4Q06156 1176 aa6.55□□□□□ -1.36
SHE9YDR393W SAM35P14693 329 aa6.54□□□□□ -1.36
SHE9YDR393W FLR1P38124 548 aa6.54□□□□□ -1.36
SHE9YDR393W YLR257WQ06146 321 aaKnown RBP6.54□□□□□ -1.36
SHE9YDR393W RET1P22276 1149 aaKnown RBP6.53□□□□□ -1.36
SHE9YDR393W CIC1P38779 376 aaKnown RBP6.53□□□□□ -1.36
SHE9YDR393W MTR4P47047 1073 aaKnown RBP6.53□□□□□ -1.36
SHE9YDR393W UTP5Q04177 643 aaKnown RBP6.53□□□□□ -1.36
SHE9YDR393W YHL012WP38709 493 aa6.52□□□□□ -1.37
SHE9YDR393W ETP1P38748 585 aaKnown RBP6.52□□□□□ -1.37
SHE9YDR393W HAT1Q12341 374 aa6.52□□□□□ -1.37
SHE9YDR393W MSH3P25336 1018 aa6.51□□□□□ -1.37
SHE9YDR393W RSA3Q05942 220 aaKnown RBP6.51□□□□□ -1.37
SHE9YDR393W XKS1P42826 600 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms