RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C DPH6Q12429 685 aa7.51□□□□□ -1.21
RTN1YDR233C GCR1P07261 785 aa7.5□□□□□ -1.21
RTN1YDR233C SEC23P15303 768 aaKnown RBP7.5□□□□□ -1.21
RTN1YDR233C MSH3P25336 1018 aa7.5□□□□□ -1.21
RTN1YDR233C NEO1P40527 1151 aa7.5□□□□□ -1.21
RTN1YDR233C XKS1P42826 600 aa7.5□□□□□ -1.21
RTN1YDR233C GNP1P48813 663 aa7.5□□□□□ -1.21
RTN1YDR233C YGL140CP53120 1219 aa7.5□□□□□ -1.21
RTN1YDR233C YGR035CP53222 116 aa7.5□□□□□ -1.21
RTN1YDR233C PEX13P80667 386 aa7.5□□□□□ -1.21
RTN1YDR233C CLN2P20438 545 aa7.49□□□□□ -1.21
RTN1YDR233C PGM2P37012 569 aaKnown RBP7.49□□□□□ -1.21
RTN1YDR233C GIP2P40036 548 aa7.49□□□□□ -1.21
RTN1YDR233C CDC34P14682 295 aa7.48□□□□□ -1.21
RTN1YDR233C RDH54P38086 958 aa7.48□□□□□ -1.21
RTN1YDR233C ALG14P38242 237 aa7.48□□□□□ -1.21
RTN1YDR233C PAN5P38787 379 aa7.48□□□□□ -1.21
RTN1YDR233C VAC8P39968 578 aa7.48□□□□□ -1.21
RTN1YDR233C TED1P40533 473 aa7.48□□□□□ -1.21
RTN1YDR233C YIG1Q08956 461 aa7.48□□□□□ -1.21
RTN1YDR233C LEM3P42838 414 aa7.47□□□□□ -1.21
RTN1YDR233C SLP1Q12232 587 aa7.47□□□□□ -1.21
RTN1YDR233C FAA4P47912 694 aaKnown RBP7.46□□□□□ -1.22
RTN1YDR233C HDA2Q06629 674 aa7.46□□□□□ -1.22
RTN1YDR233C MRL1Q06815 381 aa7.46□□□□□ -1.22
RTN1YDR233C REC8Q12188 680 aa7.46□□□□□ -1.22
RTN1YDR233C OCA5P38738 679 aa7.45□□□□□ -1.22
RTN1YDR233C NEM1P38757 446 aa7.45□□□□□ -1.22
RTN1YDR233C SHU2P38957 223 aa7.45□□□□□ -1.22
RTN1YDR233C HXT13P39924 564 aa7.45□□□□□ -1.22
RTN1YDR233C POL5P39985 1022 aaKnown RBP7.45□□□□□ -1.22
RTN1YDR233C HXT17P53631 564 aa7.45□□□□□ -1.22
RTN1YDR233C HXT15P54854 567 aa7.45□□□□□ -1.22
RTN1YDR233C SPO71Q03868 1245 aa7.45□□□□□ -1.22
RTN1YDR233C UTP22P53254 1237 aaPredicted RBP7.44□□□□□ -1.22
RTN1YDR233C RTT10Q08924 1013 aa7.44□□□□□ -1.22
RTN1YDR233C EEB1Q02891 456 aa7.43□□□□□ -1.22
RTN1YDR233C NHA1Q99271 985 aa7.43□□□□□ -1.22
RTN1YDR233C TY4B-PA0A0B7P3V8 1104 aa7.42□□□□□ -1.22
RTN1YDR233C VMA4P22203 233 aaKnown RBP7.42□□□□□ -1.22
RTN1YDR233C YKL077WP36081 392 aa7.42□□□□□ -1.22
RTN1YDR233C SLS1P42900 643 aa7.42□□□□□ -1.22
RTN1YDR233C YGR053CP53234 283 aa7.42□□□□□ -1.22
RTN1YDR233C CWC24P53769 259 aa7.42□□□□□ -1.22
RTN1YDR233C GDE1Q02979 1223 aa7.42□□□□□ -1.22
RTN1YDR233C SSF2Q12153 453 aaPredicted RBP7.42□□□□□ -1.22
RTN1YDR233C TY4A-HQ6Q5P6 413 aa7.42□□□□□ -1.22
RTN1YDR233C TAF13P11747 167 aa7.41□□□□□ -1.22
RTN1YDR233C SBE2P42223 864 aaKnown RBP7.41□□□□□ -1.22
RTN1YDR233C GCV1P48015 400 aa7.41□□□□□ -1.22
RTN1YDR233C SIW14P53965 281 aa7.41□□□□□ -1.22
RTN1YDR233C UTP5Q04177 643 aaKnown RBP7.41□□□□□ -1.22
RTN1YDR233C SCP160P06105 1222 aaKnown RBP RIP-Chip data7.4□□□□□ -1.22 RIP-Chip
RTN1YDR233C ERS1P17261 260 aa7.4□□□□□ -1.22
RTN1YDR233C MEC3Q02574 474 aa7.4□□□□□ -1.22
RTN1YDR233C ROD1Q02805 837 aa7.4□□□□□ -1.22
RTN1YDR233C ELG1Q12050 791 aa7.4□□□□□ -1.22
RTN1YDR233C SAC7P17121 654 aa7.39□□□□□ -1.23
RTN1YDR233C NNF1P47149 201 aa7.39□□□□□ -1.23
RTN1YDR233C AI1P03875 834 aa7.37□□□□□ -1.23
RTN1YDR233C TRK2P28584 889 aa7.37□□□□□ -1.23
RTN1YDR233C ARL1P38116 183 aaKnown RBP7.37□□□□□ -1.23
RTN1YDR233C YFL066CP43538 392 aa7.37□□□□□ -1.23
RTN1YDR233C MTR4P47047 1073 aaKnown RBP7.37□□□□□ -1.23
RTN1YDR233C ENT3P47160 408 aa7.37□□□□□ -1.23
RTN1YDR233C YPL062WQ02781 134 aa7.37□□□□□ -1.23
RTN1YDR233C TMA46Q12000 345 aaKnown RBP7.37□□□□□ -1.23
RTN1YDR233C PRI2P20457 528 aa7.36□□□□□ -1.23
RTN1YDR233C RER2P35196 286 aa7.36□□□□□ -1.23
RTN1YDR233C YKL069WP36088 180 aa7.36□□□□□ -1.23
RTN1YDR233C REI1P38344 393 aaPredicted RBP7.36□□□□□ -1.23
RTN1YDR233C RRM3P38766 723 aa7.36□□□□□ -1.23
RTN1YDR233C BOI2P39969 1040 aa7.36□□□□□ -1.23
RTN1YDR233C EST2Q06163 884 aa7.36□□□□□ -1.23
RTN1YDR233C YTA7P40340 1379 aa7.35□□□□□ -1.23
RTN1YDR233C DED1P06634 604 aaKnown RBP7.35□□□□□ -1.23
RTN1YDR233C MKK2P32491 506 aa7.35□□□□□ -1.23
RTN1YDR233C AFG2P32794 780 aa7.35□□□□□ -1.23
RTN1YDR233C SPO74P45819 413 aa7.35□□□□□ -1.23
RTN1YDR233C YNR014WP53719 212 aa7.35□□□□□ -1.23
RTN1YDR233C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
RTN1YDR233C GAS5Q08193 484 aa7.35□□□□□ -1.23
RTN1YDR233C OPI10Q08202 246 aa7.35□□□□□ -1.23
RTN1YDR233C ALG6Q12001 544 aaKnown RBP7.35□□□□□ -1.23
RTN1YDR233C TRP2P00899 507 aaKnown RBP7.34□□□□□ -1.23
RTN1YDR233C RAD27P26793 382 aa7.34□□□□□ -1.23
RTN1YDR233C MAE1P36013 669 aaKnown RBP7.34□□□□□ -1.23
RTN1YDR233C ADD66P36040 267 aa7.34□□□□□ -1.23
RTN1YDR233C TAT2P38967 592 aa7.34□□□□□ -1.23
RTN1YDR233C FAR11P53917 953 aa7.34□□□□□ -1.23
RTN1YDR233C YMR074CQ04773 145 aa7.34□□□□□ -1.23
RTN1YDR233C KIP3P53086 805 aaKnown RBP7.33□□□□□ -1.24
RTN1YDR233C DSE4P53753 1117 aa7.33□□□□□ -1.24
RTN1YDR233C RAT1Q02792 1006 aaKnown RBP7.33□□□□□ -1.24
RTN1YDR233C WRS1Q12109 432 aaKnown RBP7.33□□□□□ -1.24
RTN1YDR233C TY1A-NL1Q12391 440 aaKnown RBP7.33□□□□□ -1.24
RTN1YDR233C LYP1P32487 611 aa7.32□□□□□ -1.24
RTN1YDR233C RKM2Q03942 479 aa7.32□□□□□ -1.24
RTN1YDR233C ESC2Q06340 456 aa7.32□□□□□ -1.24
RTN1YDR233C FAL1Q12099 399 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 71.7 ms