RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	YJL181W	P46987	611 aa		3.87	□□□□□ -1.79
PSF1	YDR013W	HGH1	P48362	394 aa	Known RBP	3.87	□□□□□ -1.79
PSF1	YDR013W	MDG1	P53885	366 aa		3.87	□□□□□ -1.79
PSF1	YDR013W	ESF1	Q06344	628 aa	Known RBP	3.87	□□□□□ -1.79
PSF1	YDR013W	ETT1	Q08421	412 aa	Known RBP	3.87	□□□□□ -1.79
PSF1	YDR013W	SNU66	Q12420	587 aa	Predicted RBP	3.87	□□□□□ -1.79
PSF1	YDR013W	MAC1	P35192	417 aa		3.86	□□□□□ -1.79
PSF1	YDR013W	EBP2	P36049	427 aa	Known RBP	3.86	□□□□□ -1.79
PSF1	YDR013W	PBY1	P38254	753 aa		3.86	□□□□□ -1.79
PSF1	YDR013W	MLC1	P53141	149 aa		3.86	□□□□□ -1.79
PSF1	YDR013W	YGR122W	P53272	402 aa		3.86	□□□□□ -1.79
PSF1	YDR013W	BRE1	Q07457	700 aa	Known RBP	3.86	□□□□□ -1.79
PSF1	YDR013W	RRI2	Q12348	645 aa		3.86	□□□□□ -1.79
PSF1	YDR013W	NUP145	P49687	1317 aa		3.86	□□□□□ -1.79
PSF1	YDR013W	YKL133C	P36066	463 aa		3.85	□□□□□ -1.79
PSF1	YDR013W	RRP8	P38961	392 aa	Known RBP	3.85	□□□□□ -1.79
PSF1	YDR013W	BOI2	P39969	1040 aa		3.85	□□□□□ -1.79
PSF1	YDR013W	LSB6	P42951	607 aa		3.85	□□□□□ -1.79
PSF1	YDR013W	ENT3	P47160	408 aa		3.85	□□□□□ -1.79
PSF1	YDR013W	VPS20	Q04272	221 aa		3.85	□□□□□ -1.79
PSF1	YDR013W	LCD1	Q04377	747 aa		3.85	□□□□□ -1.79
PSF1	YDR013W	SSP2	Q08646	371 aa		3.85	□□□□□ -1.79
PSF1	YDR013W	YDR461C-A	Q2V2P7	80 aa		3.85	□□□□□ -1.79
PSF1	YDR013W	AIM44	Q99299	758 aa		3.85	□□□□□ -1.79
PSF1	YDR013W	LYS2	P07702	1392 aa		3.85	□□□□□ -1.79
PSF1	YDR013W	RPL19A	P0CX82	189 aa	Known RBP	3.84	□□□□□ -1.79
PSF1	YDR013W	RPL19B	P0CX83	189 aa	Predicted RBP	3.84	□□□□□ -1.79
PSF1	YDR013W	SER1	P33330	395 aa	Known RBP	3.84	□□□□□ -1.79
PSF1	YDR013W	TTI1	P36097	1038 aa		3.84	□□□□□ -1.79
PSF1	YDR013W	UBP15	P50101	1230 aa		3.84	□□□□□ -1.79
PSF1	YDR013W	RSC1	P53236	928 aa		3.84	□□□□□ -1.79
PSF1	YDR013W	ZDS2	P54786	942 aa		3.84	□□□□□ -1.79
PSF1	YDR013W	PSH1	Q12161	406 aa		3.84	□□□□□ -1.79
PSF1	YDR013W	ROM2	P51862	1356 aa	Known RBP	3.84	□□□□□ -1.79
PSF1	YDR013W	YRF1-2	P40105	1681 aa		3.84	□□□□□ -1.8
PSF1	YDR013W	SSA2	P10592	639 aa	Known RBP	3.83	□□□□□ -1.8
PSF1	YDR013W	PRP40	P33203	583 aa	Known RBP	3.83	□□□□□ -1.8
PSF1	YDR013W	MFT1	P33441	392 aa	Known RBP	3.83	□□□□□ -1.8
PSF1	YDR013W	HXT13	P39924	564 aa		3.83	□□□□□ -1.8
PSF1	YDR013W	BUD6	P41697	788 aa		3.83	□□□□□ -1.8
PSF1	YDR013W	HST1	P53685	503 aa		3.83	□□□□□ -1.8
PSF1	YDR013W	ENT1	Q12518	454 aa		3.83	□□□□□ -1.8
PSF1	YDR013W	RSF2	P46974	1380 aa		3.83	□□□□□ -1.8
PSF1	YDR013W	QCR6	P00127	147 aa		3.82	□□□□□ -1.8
PSF1	YDR013W	GPM1	P00950	247 aa	Known RBP	3.82	□□□□□ -1.8
PSF1	YDR013W	NOT3	P06102	836 aa	Known RBP	3.82	□□□□□ -1.8
PSF1	YDR013W	GCD7	P32502	381 aa	Predicted RBP	3.82	□□□□□ -1.8
PSF1	YDR013W	DID4	P36108	232 aa		3.82	□□□□□ -1.8
PSF1	YDR013W	ECM21	P38167	1117 aa	Known RBP	3.82	□□□□□ -1.8
PSF1	YDR013W	UBP12	P39538	1254 aa		3.82	□□□□□ -1.8
PSF1	YDR013W	YKE2	P52553	114 aa		3.82	□□□□□ -1.8
PSF1	YDR013W	YGL082W	P53155	381 aa		3.82	□□□□□ -1.8
PSF1	YDR013W	HXT17	P53631	564 aa		3.82	□□□□□ -1.8
PSF1	YDR013W	INP54	Q08227	384 aa	Known RBP	3.82	□□□□□ -1.8
PSF1	YDR013W	RIM20	Q12033	661 aa		3.82	□□□□□ -1.8
PSF1	YDR013W	NOP58	Q12499	511 aa	Known RBP	3.82	□□□□□ -1.8
PSF1	YDR013W	APC1	P53886	1748 aa		3.81	□□□□□ -1.8
PSF1	YDR013W	SES1	P07284	462 aa	Known RBP	3.81	□□□□□ -1.8
PSF1	YDR013W	LPD1	P09624	499 aa	Known RBP	3.81	□□□□□ -1.8
PSF1	YDR013W	CDC16	P09798	840 aa		3.81	□□□□□ -1.8
PSF1	YDR013W	OSM1	P21375	501 aa	Known RBP	3.81	□□□□□ -1.8
PSF1	YDR013W	IMP2'	P32351	346 aa		3.81	□□□□□ -1.8
PSF1	YDR013W	SLA1	P32790	1244 aa		3.81	□□□□□ -1.8
PSF1	YDR013W	PRX1	P34227	261 aa	Known RBP	3.81	□□□□□ -1.8
PSF1	YDR013W	RVS167	P39743	482 aa	Known RBP	3.81	□□□□□ -1.8
PSF1	YDR013W	TPM2	P40414	161 aa		3.81	□□□□□ -1.8
PSF1	YDR013W	IRC24	P40580	263 aa		3.81	□□□□□ -1.8
PSF1	YDR013W	SGD1	Q06132	899 aa		3.81	□□□□□ -1.8
PSF1	YDR013W	PEX19	Q07418	342 aa		3.81	□□□□□ -1.8
PSF1	YDR013W	APC11	Q12157	165 aa		3.81	□□□□□ -1.8
PSF1	YDR013W	TY1A-DR3	Q12441	440 aa		3.81	□□□□□ -1.8
PSF1	YDR013W	FKS3	Q04952	1785 aa		3.81	□□□□□ -1.8
PSF1	YDR013W	SWI1	P09547	1314 aa		3.8	□□□□□ -1.8
PSF1	YDR013W	TAF13	P11747	167 aa		3.8	□□□□□ -1.8
PSF1	YDR013W	GRX1	P25373	110 aa	Known RBP	3.8	□□□□□ -1.8
PSF1	YDR013W	KTR1	P27810	393 aa	Known RBP	3.8	□□□□□ -1.8
PSF1	YDR013W	RPN12	P32496	274 aa		3.8	□□□□□ -1.8
PSF1	YDR013W	APL2	P36000	726 aa	Predicted RBP	3.8	□□□□□ -1.8
PSF1	YDR013W	OSH3	P38713	996 aa	Known RBP	3.8	□□□□□ -1.8
PSF1	YDR013W	BDH2	P39713	417 aa		3.8	□□□□□ -1.8
PSF1	YDR013W	SPO22	P40511	975 aa		3.8	□□□□□ -1.8
PSF1	YDR013W	NPA3	P47122	385 aa		3.8	□□□□□ -1.8
PSF1	YDR013W	TCB2	P48231	1178 aa		3.8	□□□□□ -1.8
PSF1	YDR013W	YGL242C	P53066	181 aa		3.8	□□□□□ -1.8
PSF1	YDR013W	PIL1	P53252	339 aa	Known RBP	3.8	□□□□□ -1.8
PSF1	YDR013W	ADE16	P54113	591 aa	Known RBP	3.8	□□□□□ -1.8
PSF1	YDR013W	ALO1	P54783	526 aa	Known RBP	3.8	□□□□□ -1.8
PSF1	YDR013W	VMS1	Q04311	632 aa	Known RBP	3.8	□□□□□ -1.8
PSF1	YDR013W	IMH1	Q06704	911 aa	Known RBP	3.8	□□□□□ -1.8
PSF1	YDR013W	YPR084W	Q06821	456 aa		3.8	□□□□□ -1.8
PSF1	YDR013W	PSK2	Q08217	1101 aa		3.8	□□□□□ -1.8
PSF1	YDR013W	TY4B-H	P0C2J7	1802 aa		3.79	□□□□□ -1.8
PSF1	YDR013W	TY4B-J	P47024	1803 aa		3.79	□□□□□ -1.8
PSF1	YDR013W	TAT1	P38085	619 aa		3.79	□□□□□ -1.8
PSF1	YDR013W	CIC1	P38779	376 aa	Known RBP	3.79	□□□□□ -1.8
PSF1	YDR013W	NOC2	P39744	710 aa	Known RBP	3.79	□□□□□ -1.8
PSF1	YDR013W	CCT5	P40413	562 aa	Known RBP	3.79	□□□□□ -1.8
PSF1	YDR013W	VID28	P40547	921 aa		3.79	□□□□□ -1.8
PSF1	YDR013W	CTF18	P49956	741 aa		3.79	□□□□□ -1.8
PSF1	YDR013W	ISU1	Q03020	165 aa		3.79	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms