RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	GLO4	Q12320	285 aa		7.78	□□□□□ -1.16
TRP1	YDR007W	IDI1	P15496	288 aa		7.77	□□□□□ -1.17
TRP1	YDR007W	CHZ1	P40019	153 aa	Predicted RBP	7.77	□□□□□ -1.17
TRP1	YDR007W	YJL181W	P46987	611 aa		7.77	□□□□□ -1.17
TRP1	YDR007W	GNP1	P48813	663 aa		7.77	□□□□□ -1.17
TRP1	YDR007W	HEH2	Q03281	663 aa		7.77	□□□□□ -1.17
TRP1	YDR007W	POB3	Q04636	552 aa	Known RBP	7.77	□□□□□ -1.17
TRP1	YDR007W	SPO75	Q07798	868 aa		7.77	□□□□□ -1.17
TRP1	YDR007W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	7.76	□□□□□ -1.17	not detected
TRP1	YDR007W	SPO20	Q04359	397 aa		7.76	□□□□□ -1.17
TRP1	YDR007W	YKL077W	P36081	392 aa		7.75	□□□□□ -1.17
TRP1	YDR007W	YBR184W	P38299	523 aa		7.75	□□□□□ -1.17
TRP1	YDR007W	OSH7	P38755	437 aa		7.75	□□□□□ -1.17
TRP1	YDR007W	SIW14	P53965	281 aa		7.75	□□□□□ -1.17
TRP1	YDR007W	PPM2	Q08282	695 aa		7.75	□□□□□ -1.17
TRP1	YDR007W	FLC1	Q08967	793 aa		7.75	□□□□□ -1.17
TRP1	YDR007W	OSH2	Q12451	1283 aa		7.75	□□□□□ -1.17
TRP1	YDR007W	INP51	P40559	946 aa	Known RBP	7.74	□□□□□ -1.17
TRP1	YDR007W	TRP2	P00899	507 aa	Known RBP	7.73	□□□□□ -1.17
TRP1	YDR007W	PHO8	P11491	566 aa		7.73	□□□□□ -1.17
TRP1	YDR007W	AGP1	P25376	633 aa		7.73	□□□□□ -1.17
TRP1	YDR007W	LYP1	P32487	611 aa		7.73	□□□□□ -1.17
TRP1	YDR007W	RER2	P35196	286 aa		7.73	□□□□□ -1.17
TRP1	YDR007W	YHR020W	P38708	688 aa	Known RBP	7.73	□□□□□ -1.17
TRP1	YDR007W	MNN1	P39106	762 aa		7.73	□□□□□ -1.17
TRP1	YDR007W	RSP5	P39940	809 aa	Known RBP	7.73	□□□□□ -1.17
TRP1	YDR007W	YGR125W	P53273	1036 aa		7.73	□□□□□ -1.17
TRP1	YDR007W	BIO5	P53744	561 aa	Known RBP	7.73	□□□□□ -1.17
TRP1	YDR007W	HEM13	P11353	328 aa	Known RBP	7.72	□□□□□ -1.17
TRP1	YDR007W	ABD1	P32783	436 aa	Predicted RBP	7.72	□□□□□ -1.17
TRP1	YDR007W	TIM23	P32897	222 aa		7.72	□□□□□ -1.17
TRP1	YDR007W	MRP8	P35719	219 aa		7.72	□□□□□ -1.17
TRP1	YDR007W	HXT13	P39924	564 aa		7.72	□□□□□ -1.17
TRP1	YDR007W	YJR124C	P47159	448 aa		7.72	□□□□□ -1.17
TRP1	YDR007W	ENT3	P47160	408 aa		7.72	□□□□□ -1.17
TRP1	YDR007W	HXT17	P53631	564 aa		7.72	□□□□□ -1.17
TRP1	YDR007W	HXT15	P54854	567 aa		7.72	□□□□□ -1.17
TRP1	YDR007W	SHE9	Q04172	456 aa		7.72	□□□□□ -1.17
TRP1	YDR007W	OPT2	Q06593	877 aa		7.72	□□□□□ -1.17
TRP1	YDR007W	REC8	Q12188	680 aa		7.72	□□□□□ -1.17
TRP1	YDR007W	VMA4	P22203	233 aa	Known RBP	7.71	□□□□□ -1.18
TRP1	YDR007W	SBA1	P28707	216 aa	Known RBP	7.71	□□□□□ -1.18
TRP1	YDR007W	STE5	P32917	917 aa		7.71	□□□□□ -1.18
TRP1	YDR007W	RDH54	P38086	958 aa		7.71	□□□□□ -1.18
TRP1	YDR007W	NOP2	P40991	618 aa	Known RBP	7.71	□□□□□ -1.18
TRP1	YDR007W	YLR125W	Q12138	136 aa		7.71	□□□□□ -1.18
TRP1	YDR007W	RPL8B	P29453	256 aa	Known RBP	7.7	□□□□□ -1.18
TRP1	YDR007W	VBA5	P36172	582 aa		7.7	□□□□□ -1.18
TRP1	YDR007W	EXO5	P38289	585 aa		7.7	□□□□□ -1.18
TRP1	YDR007W	GGA2	P38817	585 aa	Known RBP	7.7	□□□□□ -1.18
TRP1	YDR007W	IRR1	P40541	1150 aa		7.7	□□□□□ -1.18
TRP1	YDR007W	NAM8	Q00539	523 aa	Known RBP	7.7	□□□□□ -1.18
TRP1	YDR007W	ROD1	Q02805	837 aa		7.7	□□□□□ -1.18
TRP1	YDR007W	UTP14	Q04500	899 aa	Known RBP	7.7	□□□□□ -1.18
TRP1	YDR007W	YLR225C	Q05948	407 aa	Known RBP	7.7	□□□□□ -1.18
TRP1	YDR007W	YGR161W-C	Q3E744	92 aa		7.7	□□□□□ -1.18
TRP1	YDR007W	HVG1	P0CE11	249 aa		7.69	□□□□□ -1.18
TRP1	YDR007W	GAL11	P19659	1081 aa		7.69	□□□□□ -1.18
TRP1	YDR007W	HSP60	P19882	572 aa	Known RBP	7.69	□□□□□ -1.18
TRP1	YDR007W	DIT1	P21623	536 aa		7.69	□□□□□ -1.18
TRP1	YDR007W	TSR4	P25040	408 aa		7.69	□□□□□ -1.18
TRP1	YDR007W	TFA2	P36145	328 aa		7.69	□□□□□ -1.18
TRP1	YDR007W	GLY1	P37303	387 aa	Known RBP	7.69	□□□□□ -1.18
TRP1	YDR007W	AMN1	P38285	549 aa	Predicted RBP	7.69	□□□□□ -1.18
TRP1	YDR007W	FET4	P40988	552 aa		7.69	□□□□□ -1.18
TRP1	YDR007W	LSB6	P42951	607 aa		7.69	□□□□□ -1.18
TRP1	YDR007W	YNR065C	P53751	1116 aa		7.69	□□□□□ -1.18
TRP1	YDR007W	EST2	Q06163	884 aa		7.69	□□□□□ -1.18
TRP1	YDR007W	DED1	P06634	604 aa	Known RBP	7.68	□□□□□ -1.18
TRP1	YDR007W	HTS1	P07263	546 aa	Known RBP	7.68	□□□□□ -1.18
TRP1	YDR007W	FPS1	P23900	669 aa		7.68	□□□□□ -1.18
TRP1	YDR007W	SEA4	P38164	1038 aa		7.68	□□□□□ -1.18
TRP1	YDR007W	MSC7	P38694	644 aa		7.68	□□□□□ -1.18
TRP1	YDR007W	SCW11	P53189	542 aa		7.68	□□□□□ -1.18
TRP1	YDR007W	YMR265C	Q03508	461 aa	Known RBP	7.68	□□□□□ -1.18
TRP1	YDR007W	ESC2	Q06340	456 aa		7.68	□□□□□ -1.18
TRP1	YDR007W	FMP25	Q08023	583 aa		7.68	□□□□□ -1.18
TRP1	YDR007W	SOG2	Q08817	791 aa		7.68	□□□□□ -1.18
TRP1	YDR007W	CIT1	P00890	479 aa		7.67	□□□□□ -1.18
TRP1	YDR007W	ARE1	P25628	610 aa		7.67	□□□□□ -1.18
TRP1	YDR007W	THI4	P32318	326 aa		7.67	□□□□□ -1.18
TRP1	YDR007W	PBY1	P38254	753 aa		7.67	□□□□□ -1.18
TRP1	YDR007W	ERP6	P53198	216 aa		7.67	□□□□□ -1.18
TRP1	YDR007W	GCR2	Q01722	534 aa		7.67	□□□□□ -1.18
TRP1	YDR007W	EAF1	Q06337	982 aa		7.67	□□□□□ -1.18
TRP1	YDR007W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	7.66	□□□□□ -1.18	not detected
TRP1	YDR007W	SBP1	P10080	294 aa	Known RBP	7.66	□□□□□ -1.18
TRP1	YDR007W	INO1	P11986	533 aa		7.66	□□□□□ -1.18
TRP1	YDR007W	TRK1	P12685	1235 aa		7.66	□□□□□ -1.18
TRP1	YDR007W	PRK1	P40494	810 aa		7.66	□□□□□ -1.18
TRP1	YDR007W	MTR4	P47047	1073 aa	Known RBP	7.66	□□□□□ -1.18
TRP1	YDR007W	UTP22	P53254	1237 aa	Predicted RBP	7.66	□□□□□ -1.18
TRP1	YDR007W	TY1A-BL	Q12266	440 aa		7.66	□□□□□ -1.18
TRP1	YDR007W	MRP10	O75012	95 aa		7.65	□□□□□ -1.18
TRP1	YDR007W	CAN1	P04817	590 aa		7.65	□□□□□ -1.18
TRP1	YDR007W	MKK2	P32491	506 aa		7.65	□□□□□ -1.18
TRP1	YDR007W	MOT2	P34909	587 aa	Known RBP	7.65	□□□□□ -1.18
TRP1	YDR007W	NEO1	P40527	1151 aa		7.65	□□□□□ -1.18
TRP1	YDR007W	MSH4	P40965	878 aa	Predicted RBP	7.65	□□□□□ -1.18
TRP1	YDR007W	HUL4	P40985	892 aa		7.65	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms