RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W MDM36Q06820 579 aa6.41□□□□□ -1.38
SUB2YDL084W YPL191CQ08930 360 aa6.41□□□□□ -1.38
SUB2YDL084W RIO1Q12196 484 aaKnown RBP6.41□□□□□ -1.38
SUB2YDL084W RRP36Q12481 300 aaPredicted RBP6.41□□□□□ -1.38
SUB2YDL084W YGR161W-CQ3E744 92 aa6.41□□□□□ -1.38
SUB2YDL084W CDC60P26637 1090 aaKnown RBP6.4□□□□□ -1.39
SUB2YDL084W UIP5P36137 443 aa6.4□□□□□ -1.39
SUB2YDL084W MRPL40P36534 297 aa6.4□□□□□ -1.39
SUB2YDL084W SLI15P38283 698 aa6.4□□□□□ -1.39
SUB2YDL084W SLX1P38324 304 aa6.4□□□□□ -1.39
SUB2YDL084W GUA1P38625 525 aaKnown RBP6.4□□□□□ -1.39
SUB2YDL084W YIR042CP40586 236 aa6.4□□□□□ -1.39
SUB2YDL084W SUM1P46676 1062 aa6.4□□□□□ -1.39
SUB2YDL084W YJR142WP47173 342 aa6.4□□□□□ -1.39
SUB2YDL084W SRB7P47822 140 aa6.4□□□□□ -1.39
SUB2YDL084W LSC1P53598 329 aaKnown RBP6.4□□□□□ -1.39
SUB2YDL084W ERO1Q03103 563 aa6.4□□□□□ -1.39
SUB2YDL084W ATG16Q03818 150 aa6.4□□□□□ -1.39
SUB2YDL084W MSH6Q03834 1242 aa6.4□□□□□ -1.39
SUB2YDL084W DPH6Q12429 685 aa6.4□□□□□ -1.39
SUB2YDL084W STH1P32597 1359 aa6.4□□□□□ -1.39
SUB2YDL084W STE11P23561 717 aa6.39□□□□□ -1.39
SUB2YDL084W SWC3P31376 625 aa6.39□□□□□ -1.39
SUB2YDL084W SLA1P32790 1244 aa6.39□□□□□ -1.39
SUB2YDL084W APL2P36000 726 aaPredicted RBP6.39□□□□□ -1.39
SUB2YDL084W DSF2P38213 736 aa6.39□□□□□ -1.39
SUB2YDL084W RIC1P40395 1056 aa6.39□□□□□ -1.39
SUB2YDL084W DAS1P47005 663 aa6.39□□□□□ -1.39
SUB2YDL084W YGR021WP53212 290 aa6.39□□□□□ -1.39
SUB2YDL084W SDA1P53313 767 aaKnown RBP6.39□□□□□ -1.39
SUB2YDL084W HOL1P53389 586 aa6.39□□□□□ -1.39
SUB2YDL084W IST1P53843 298 aaPredicted RBP6.39□□□□□ -1.39
SUB2YDL084W LAP3Q01532 483 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
SUB2YDL084W SPC19Q03954 165 aa6.39□□□□□ -1.39
SUB2YDL084W ECM11Q04110 302 aa6.39□□□□□ -1.39
SUB2YDL084W DPL1Q05567 589 aa6.39□□□□□ -1.39
SUB2YDL084W ADE13Q05911 482 aaKnown RBP6.39□□□□□ -1.39
SUB2YDL084W RTC5Q12108 567 aaKnown RBP6.39□□□□□ -1.39
SUB2YDL084W SEC39Q12745 709 aa6.39□□□□□ -1.39
SUB2YDL084W YBL111CQ3E7Y5 667 aa6.39□□□□□ -1.39
SUB2YDL084W LEU1P07264 779 aaKnown RBP6.38□□□□□ -1.39
SUB2YDL084W CIT2P08679 460 aa6.38□□□□□ -1.39
SUB2YDL084W SWI1P09547 1314 aa6.38□□□□□ -1.39
SUB2YDL084W RAD50P12753 1312 aa6.38□□□□□ -1.39
SUB2YDL084W RED1P14291 827 aa6.38□□□□□ -1.39
SUB2YDL084W TPM1P17536 199 aaKnown RBP6.38□□□□□ -1.39
SUB2YDL084W PSE1P32337 1089 aaKnown RBP6.38□□□□□ -1.39
SUB2YDL084W ELM1P32801 640 aa6.38□□□□□ -1.39
SUB2YDL084W NUF2P33895 451 aa6.38□□□□□ -1.39
SUB2YDL084W YHR020WP38708 688 aaKnown RBP6.38□□□□□ -1.39
SUB2YDL084W ERC1P38767 581 aa6.38□□□□□ -1.39
SUB2YDL084W TOM71P38825 639 aaKnown RBP6.38□□□□□ -1.39
SUB2YDL084W SPC72P39723 622 aa6.38□□□□□ -1.39
SUB2YDL084W VID27P40157 782 aa6.38□□□□□ -1.39
SUB2YDL084W NUP84P52891 726 aa6.38□□□□□ -1.39
SUB2YDL084W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
SUB2YDL084W ADA2Q02336 434 aa6.38□□□□□ -1.39
SUB2YDL084W FUS2Q05670 677 aa6.38□□□□□ -1.39
SUB2YDL084W RGA2Q06407 1009 aa6.38□□□□□ -1.39
SUB2YDL084W AOS1Q06624 347 aa6.38□□□□□ -1.39
SUB2YDL084W YPR097WQ06839 1073 aa6.38□□□□□ -1.39
SUB2YDL084W RRI2Q12348 645 aa6.38□□□□□ -1.39
SUB2YDL084W DIT1P21623 536 aa6.37□□□□□ -1.39
SUB2YDL084W DAL80P26343 269 aa6.37□□□□□ -1.39
SUB2YDL084W YKL091CP33324 310 aaKnown RBP6.37□□□□□ -1.39
SUB2YDL084W STO1P34160 861 aaKnown RBP6.37□□□□□ -1.39
SUB2YDL084W YEL1P34225 687 aa6.37□□□□□ -1.39
SUB2YDL084W MTC2P34246 357 aa6.37□□□□□ -1.39
SUB2YDL084W MIC60P36112 540 aa6.37□□□□□ -1.39
SUB2YDL084W YBL028CP38202 106 aa6.37□□□□□ -1.39
SUB2YDL084W RIM11P38615 370 aa6.37□□□□□ -1.39
SUB2YDL084W CIC1P38779 376 aaKnown RBP6.37□□□□□ -1.39
SUB2YDL084W SSZ1P38788 538 aaKnown RBP6.37□□□□□ -1.39
SUB2YDL084W DAK2P43550 591 aa6.37□□□□□ -1.39
SUB2YDL084W SAP155P43612 1002 aa6.37□□□□□ -1.39
SUB2YDL084W UTP22P53254 1237 aaPredicted RBP6.37□□□□□ -1.39
SUB2YDL084W GIC2Q06648 383 aa6.37□□□□□ -1.39
SUB2YDL084W PEX19Q07418 342 aa6.37□□□□□ -1.39
SUB2YDL084W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
SUB2YDL084W AIM7Q12156 149 aa6.37□□□□□ -1.39
SUB2YDL084W WHI5Q12416 295 aa6.37□□□□□ -1.39
SUB2YDL084W PDI1P17967 522 aaKnown RBP6.36□□□□□ -1.39
SUB2YDL084W URA1P28272 314 aaPredicted RBP6.36□□□□□ -1.39
SUB2YDL084W PTR2P32901 601 aa6.36□□□□□ -1.39
SUB2YDL084W SWH1P35845 1188 aa6.36□□□□□ -1.39
SUB2YDL084W POP2P39008 433 aa6.36□□□□□ -1.39
SUB2YDL084W SIT1P39980 628 aa6.36□□□□□ -1.39
SUB2YDL084W TMN3P40071 706 aa6.36□□□□□ -1.39
SUB2YDL084W FMP10P40098 244 aa6.36□□□□□ -1.39
SUB2YDL084W MPH1P40562 993 aa6.36□□□□□ -1.39
SUB2YDL084W PEX14P53112 341 aa6.36□□□□□ -1.39
SUB2YDL084W RNT1Q02555 471 aa6.36□□□□□ -1.39
SUB2YDL084W YDL073WQ07454 984 aa6.36□□□□□ -1.39
SUB2YDL084W YPL277CQ08989 487 aa6.36□□□□□ -1.39
SUB2YDL084W SLP1Q12232 587 aa6.36□□□□□ -1.39
SUB2YDL084W CFT1Q06632 1357 aaKnown RBP6.35□□□□□ -1.39
SUB2YDL084W KSS1P14681 368 aa6.35□□□□□ -1.39
SUB2YDL084W PAP1P29468 568 aaKnown RBP6.35□□□□□ -1.39
SUB2YDL084W BIO2P32451 375 aa6.35□□□□□ -1.39
SUB2YDL084W RRF1P38771 230 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms