RNA–Protein interactions for RNA: YBL104C

SEA4, Transcript of Subunit of the SEA (Seh1-associated) complex, yeast

Gene SEA4, Length 3,117 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEA4	YBL104C	RAS1	P01119	309 aa		4.12	□□□□□ -1.75
SEA4	YBL104C	NMD2	P38798	1089 aa	Known RBP	4.12	□□□□□ -1.75
SEA4	YBL104C	ZDS1	P50111	915 aa	Known RBP	4.12	□□□□□ -1.75
SEA4	YBL104C	BDS1	Q08347	646 aa		4.12	□□□□□ -1.75
SEA4	YBL104C	RPO41	P13433	1351 aa	Known RBP	4.12	□□□□□ -1.75
SEA4	YBL104C	MRT4	P33201	236 aa	Known RBP	4.11	□□□□□ -1.75
SEA4	YBL104C	NTH2	P35172	780 aa		4.11	□□□□□ -1.75
SEA4	YBL104C	ROM1	P53046	1155 aa		4.11	□□□□□ -1.75
SEA4	YBL104C	PIL1	P53252	339 aa	Known RBP	4.11	□□□□□ -1.75
SEA4	YBL104C	CEF1	Q03654	590 aa	Predicted RBP	4.11	□□□□□ -1.75
SEA4	YBL104C	PUF6	Q04373	656 aa	Known RBP	4.11	□□□□□ -1.75
SEA4	YBL104C	HAT1	Q12341	374 aa		4.11	□□□□□ -1.75
SEA4	YBL104C	SEC3	P33332	1336 aa	Known RBP	4.11	□□□□□ -1.75
SEA4	YBL104C	TY1B-A	O13527	1196 aa	Known RBP	4.11	□□□□□ -1.75
SEA4	YBL104C	COB	P00163	385 aa		4.11	□□□□□ -1.75
SEA4	YBL104C	SPC110	P32380	944 aa		4.11	□□□□□ -1.75
SEA4	YBL104C	SSF1	P38789	453 aa	Predicted RBP	4.11	□□□□□ -1.75
SEA4	YBL104C	TRS33	Q99394	268 aa		4.11	□□□□□ -1.75
SEA4	YBL104C	CLA4	P48562	842 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	HST3	P53687	447 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	PUN1	Q06991	263 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	DPS1	P04802	557 aa	Known RBP	4.1	□□□□□ -1.75
SEA4	YBL104C	SLD2	P34252	453 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	SPC42	P36094	363 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	TAF5	P38129	798 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	HOS4	P40480	1083 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	ADR1	P07248	1323 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	RAD2	P07276	1031 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	RPS6A	P0CX37	236 aa	Known RBP	4.1	□□□□□ -1.75
SEA4	YBL104C	RPS6B	P0CX38	236 aa	Predicted RBP	4.1	□□□□□ -1.75
SEA4	YBL104C	UGA3	P26370	528 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	SEC20	P28791	383 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	DLD3	P39976	496 aa	Known RBP	4.1	□□□□□ -1.75
SEA4	YBL104C	YIL089W	P40500	205 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	YFL040W	P43562	540 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	MSN5	P52918	1224 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	CWH41	P53008	833 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	FMP30	Q02883	468 aa		4.1	□□□□□ -1.75
SEA4	YBL104C	CYT1	P07143	309 aa		4.09	□□□□□ -1.75
SEA4	YBL104C	NNF2	P53253	936 aa		4.09	□□□□□ -1.75
SEA4	YBL104C	CDC4	P07834	779 aa		4.09	□□□□□ -1.75
SEA4	YBL104C	RET1	P22276	1149 aa	Known RBP	4.09	□□□□□ -1.75
SEA4	YBL104C	DLD1	P32891	587 aa		4.09	□□□□□ -1.75
SEA4	YBL104C	YJR008W	P47085	338 aa		4.09	□□□□□ -1.75
SEA4	YBL104C	YNR014W	P53719	212 aa		4.09	□□□□□ -1.75
SEA4	YBL104C	CAB1	Q04430	367 aa		4.09	□□□□□ -1.75
SEA4	YBL104C	KAR5	Q04746	504 aa		4.09	□□□□□ -1.75
SEA4	YBL104C	MET32	Q12041	191 aa		4.09	□□□□□ -1.75
SEA4	YBL104C	PKH1	Q03407	766 aa		4.08	□□□□□ -1.76
SEA4	YBL104C	WTM2	Q12206	467 aa		4.08	□□□□□ -1.76
SEA4	YBL104C	SWI5	P08153	709 aa		4.08	□□□□□ -1.76
SEA4	YBL104C	STE6	P12866	1290 aa		4.08	□□□□□ -1.76
SEA4	YBL104C	CHZ1	P40019	153 aa	Predicted RBP	4.08	□□□□□ -1.76
SEA4	YBL104C	LEM3	P42838	414 aa		4.08	□□□□□ -1.76
SEA4	YBL104C	RRT6	P53117	311 aa	Predicted RBP	4.08	□□□□□ -1.76
SEA4	YBL104C	FLO1	P32768	1537 aa		4.08	□□□□□ -1.76
SEA4	YBL104C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SEA4	YBL104C	PEA2	P40091	420 aa		4.08	□□□□□ -1.76
SEA4	YBL104C	RPT2	P40327	437 aa	Known RBP	4.08	□□□□□ -1.76
SEA4	YBL104C	UBX2	Q04228	584 aa		4.08	□□□□□ -1.76
SEA4	YBL104C	PNP1	Q05788	311 aa		4.08	□□□□□ -1.76
SEA4	YBL104C	SRS2	P12954	1174 aa		4.07	□□□□□ -1.76
SEA4	YBL104C	ASH1	P34233	588 aa		4.07	□□□□□ -1.76
SEA4	YBL104C	AIR1	P40507	360 aa	Known RBP	4.07	□□□□□ -1.76
SEA4	YBL104C	TY4A-J	P47023	414 aa		4.07	□□□□□ -1.76
SEA4	YBL104C	EAF6	P47128	113 aa		4.07	□□□□□ -1.76
SEA4	YBL104C	CWC15	Q03772	175 aa	Known RBP	4.07	□□□□□ -1.76
SEA4	YBL104C	TUS1	Q06412	1307 aa		4.07	□□□□□ -1.76
SEA4	YBL104C	RRP14	P36080	434 aa	Known RBP	4.07	□□□□□ -1.76
SEA4	YBL104C	RIX1	P38883	763 aa	Predicted RBP	4.07	□□□□□ -1.76
SEA4	YBL104C	VPS4	P52917	437 aa		4.07	□□□□□ -1.76
SEA4	YBL104C	ECM30	Q06673	1274 aa		4.07	□□□□□ -1.76
SEA4	YBL104C	PSK2	Q08217	1101 aa		4.07	□□□□□ -1.76
SEA4	YBL104C	DJP1	P40564	432 aa		4.06	□□□□□ -1.76
SEA4	YBL104C	ECM16	Q04217	1267 aa	Known RBP	4.06	□□□□□ -1.76
SEA4	YBL104C	FUR4	P05316	633 aa	Known RBP	4.06	□□□□□ -1.76
SEA4	YBL104C	UTP7	P40055	554 aa	Known RBP	4.06	□□□□□ -1.76
SEA4	YBL104C	XKS1	P42826	600 aa		4.06	□□□□□ -1.76
SEA4	YBL104C	RCF1	Q03713	159 aa		4.06	□□□□□ -1.76
SEA4	YBL104C	SUP35	P05453	685 aa	Known RBP	4.06	□□□□□ -1.76
SEA4	YBL104C	ARG82	P07250	355 aa		4.06	□□□□□ -1.76
SEA4	YBL104C	RAD51	P25454	400 aa		4.06	□□□□□ -1.76
SEA4	YBL104C	TPS3	P38426	1054 aa	Known RBP	4.06	□□□□□ -1.76
SEA4	YBL104C	TAP42	Q04372	366 aa		4.06	□□□□□ -1.76
SEA4	YBL104C	YBL113C	Q7M4S9	792 aa		4.06	□□□□□ -1.76
SEA4	YBL104C	AFT1	P22149	690 aa		4.05	□□□□□ -1.76
SEA4	YBL104C	RRN6	P32786	894 aa		4.05	□□□□□ -1.76
SEA4	YBL104C	TIM50	Q02776	476 aa		4.05	□□□□□ -1.76
SEA4	YBL104C	GIR2	Q03768	265 aa	Predicted RBP	4.05	□□□□□ -1.76
SEA4	YBL104C	HSC82	P15108	705 aa	Known RBP	4.04	□□□□□ -1.76
SEA4	YBL104C	GAL11	P19659	1081 aa		4.04	□□□□□ -1.76
SEA4	YBL104C	CDC11	P32458	415 aa		4.04	□□□□□ -1.76
SEA4	YBL104C	ALA1	P40825	983 aa	Known RBP	4.04	□□□□□ -1.76
SEA4	YBL104C	GDE1	Q02979	1223 aa		4.04	□□□□□ -1.76
SEA4	YBL104C	YLR257W	Q06146	321 aa	Known RBP	4.04	□□□□□ -1.76
SEA4	YBL104C	CFT2	Q12102	859 aa	Predicted RBP	4.04	□□□□□ -1.76
SEA4	YBL104C	PHM7	Q12252	991 aa		4.04	□□□□□ -1.76
SEA4	YBL104C	LEU2	P04173	364 aa	Predicted RBP	4.04	□□□□□ -1.76
SEA4	YBL104C	PPH3	P32345	308 aa		4.04	□□□□□ -1.76
SEA4	YBL104C	GRS1	P38088	690 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms