RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C YCS4Q06156 1176 aa7.43□□□□□ -1.22
RTG3YBL103C YOR223WQ12015 292 aa7.43□□□□□ -1.22
RTG3YBL103C YGR130CP53278 816 aa7.43□□□□□ -1.22
RTG3YBL103C MAC1P35192 417 aa7.42□□□□□ -1.22
RTG3YBL103C OMA1P36163 345 aa7.42□□□□□ -1.22
RTG3YBL103C GIC2Q06648 383 aa7.42□□□□□ -1.22
RTG3YBL103C GCD6P32501 712 aaKnown RBP7.41□□□□□ -1.22
RTG3YBL103C YKR073CP36153 106 aa7.41□□□□□ -1.22
RTG3YBL103C DAK2P43550 591 aa7.41□□□□□ -1.22
RTG3YBL103C MEC3Q02574 474 aa7.41□□□□□ -1.22
RTG3YBL103C SEN54Q02825 467 aaPredicted RBP7.41□□□□□ -1.22
RTG3YBL103C DOT1Q04089 582 aaKnown RBP7.41□□□□□ -1.22
RTG3YBL103C ALG6Q12001 544 aaKnown RBP7.41□□□□□ -1.22
RTG3YBL103C YLL054CQ12244 843 aa7.41□□□□□ -1.22
RTG3YBL103C TY1A-LR4P0C2I8 440 aaKnown RBP7.4□□□□□ -1.22
RTG3YBL103C TY1A-DR6P0CX70 440 aa7.4□□□□□ -1.22
RTG3YBL103C TY1A-ER1P0CX71 440 aa7.4□□□□□ -1.22
RTG3YBL103C TY1A-LR2P0CX72 440 aa7.4□□□□□ -1.22
RTG3YBL103C TY1A-PLP0CX73 440 aa7.4□□□□□ -1.22
RTG3YBL103C TY1A-JR1P0CX74 440 aa7.4□□□□□ -1.22
RTG3YBL103C TY1A-LR3P0CX75 440 aa7.4□□□□□ -1.22
RTG3YBL103C TY1A-ML2P0CX76 440 aa7.4□□□□□ -1.22
RTG3YBL103C VPS35P34110 944 aa7.4□□□□□ -1.22
RTG3YBL103C GPT2P36148 743 aa7.4□□□□□ -1.22
RTG3YBL103C MED7Q08278 222 aa7.4□□□□□ -1.22
RTG3YBL103C TY1A-GR1Q12085 440 aa7.4□□□□□ -1.22
RTG3YBL103C TY1A-PR3Q6Q5H1 440 aaKnown RBP7.4□□□□□ -1.22
RTG3YBL103C TY1A-OLQ92392 440 aaKnown RBP7.4□□□□□ -1.22
RTG3YBL103C SEC20P28791 383 aa7.39□□□□□ -1.23
RTG3YBL103C UGA4P32837 571 aa7.39□□□□□ -1.23
RTG3YBL103C REI1P38344 393 aaPredicted RBP7.39□□□□□ -1.23
RTG3YBL103C INP52P50942 1183 aa7.39□□□□□ -1.23
RTG3YBL103C PRP40P33203 583 aaKnown RBP7.38□□□□□ -1.23
RTG3YBL103C TOS4Q06266 489 aa7.38□□□□□ -1.23
RTG3YBL103C DAL4Q04895 635 aa7.37□□□□□ -1.23
RTG3YBL103C YKL077WP36081 392 aa7.36□□□□□ -1.23
RTG3YBL103C TOS1P38288 455 aa7.36□□□□□ -1.23
RTG3YBL103C CYC7P00045 113 aa7.36□□□□□ -1.23
RTG3YBL103C EXO5P38289 585 aa7.36□□□□□ -1.23
RTG3YBL103C SPO74P45819 413 aa7.36□□□□□ -1.23
RTG3YBL103C YML020WQ03722 664 aa7.36□□□□□ -1.23
RTG3YBL103C MSB1P21339 1137 aaKnown RBP7.35□□□□□ -1.23
RTG3YBL103C SLS1P42900 643 aa7.35□□□□□ -1.23
RTG3YBL103C OXR1Q08952 273 aa7.35□□□□□ -1.23
RTG3YBL103C GLT1Q12680 2145 aaKnown RBP7.34□□□□□ -1.23
RTG3YBL103C RPT1P33299 467 aaKnown RBP7.34□□□□□ -1.23
RTG3YBL103C SHU2P38957 223 aa7.34□□□□□ -1.23
RTG3YBL103C ULP1Q02724 621 aa7.34□□□□□ -1.23
RTG3YBL103C SLD2P34252 453 aa7.33□□□□□ -1.24
RTG3YBL103C WHI3P34761 661 aaKnown RBP7.33□□□□□ -1.24
RTG3YBL103C YGR045CP53229 120 aa7.33□□□□□ -1.24
RTG3YBL103C ELA1P53861 379 aaPredicted RBP7.33□□□□□ -1.24
RTG3YBL103C PEX13P80667 386 aa7.33□□□□□ -1.24
RTG3YBL103C NOG1Q02892 647 aaKnown RBP7.33□□□□□ -1.24
RTG3YBL103C MSH3P25336 1018 aa7.32□□□□□ -1.24
RTG3YBL103C LIP5P32875 414 aa7.32□□□□□ -1.24
RTG3YBL103C MSH4P40965 878 aaPredicted RBP7.32□□□□□ -1.24
RTG3YBL103C MMM1P41800 426 aa7.32□□□□□ -1.24
RTG3YBL103C RSM26P47141 266 aa7.32□□□□□ -1.24
RTG3YBL103C KAR2P16474 682 aaKnown RBP7.31□□□□□ -1.24
RTG3YBL103C NEM1P38757 446 aa7.31□□□□□ -1.24
RTG3YBL103C AVO1Q08236 1176 aa7.31□□□□□ -1.24
RTG3YBL103C ARL1P38116 183 aaKnown RBP7.3□□□□□ -1.24
RTG3YBL103C FAA3P39002 694 aa7.3□□□□□ -1.24
RTG3YBL103C CTH1P47976 325 aa7.3□□□□□ -1.24
RTG3YBL103C RPS4AP0CX35 261 aaKnown RBP7.3□□□□□ -1.24
RTG3YBL103C RPS4BP0CX36 261 aaKnown RBP7.3□□□□□ -1.24
RTG3YBL103C PUB1P32588 453 aaKnown RBP RIP-Chip data7.3□□□□□ -1.24not detected
RTG3YBL103C SQT1P35184 431 aa7.3□□□□□ -1.24
RTG3YBL103C CIT3P43635 486 aa7.29□□□□□ -1.24
RTG3YBL103C BRE4Q07660 1125 aa7.29□□□□□ -1.24
RTG3YBL103C GCD1P09032 578 aaPredicted RBP7.28□□□□□ -1.24
RTG3YBL103C PEX28P38848 579 aa7.28□□□□□ -1.24
RTG3YBL103C MTR4P47047 1073 aaKnown RBP7.28□□□□□ -1.24
RTG3YBL103C SDH1Q00711 640 aa7.28□□□□□ -1.24
RTG3YBL103C EAR1Q03212 550 aa7.28□□□□□ -1.24
RTG3YBL103C MAG2Q06436 670 aaKnown RBP7.28□□□□□ -1.24
RTG3YBL103C HXK1P04806 485 aaKnown RBP7.27□□□□□ -1.25
RTG3YBL103C ALT1P52893 592 aa7.27□□□□□ -1.25
RTG3YBL103C YPL109CQ02981 657 aa7.27□□□□□ -1.25
RTG3YBL103C UTP5Q04177 643 aaKnown RBP7.27□□□□□ -1.25
RTG3YBL103C NOP8Q08287 484 aaPredicted RBP7.27□□□□□ -1.25
RTG3YBL103C NFS1P25374 497 aa7.26□□□□□ -1.25
RTG3YBL103C RCM1P53972 490 aa7.26□□□□□ -1.25
RTG3YBL103C ADI1Q03677 179 aa7.26□□□□□ -1.25
RTG3YBL103C SMY2P32909 740 aaKnown RBP7.25□□□□□ -1.25
RTG3YBL103C SEA4P38164 1038 aa7.25□□□□□ -1.25
RTG3YBL103C POL32P47110 350 aa7.25□□□□□ -1.25
RTG3YBL103C NNK1P36003 928 aa7.24□□□□□ -1.25
RTG3YBL103C XKS1P42826 600 aa7.24□□□□□ -1.25
RTG3YBL103C ATE1P16639 503 aa7.24□□□□□ -1.25
RTG3YBL103C VMA4P22203 233 aaKnown RBP7.24□□□□□ -1.25
RTG3YBL103C YAR028WP39548 234 aa7.24□□□□□ -1.25
RTG3YBL103C YGL140CP53120 1219 aa7.24□□□□□ -1.25
RTG3YBL103C YNR063WP53749 607 aa7.24□□□□□ -1.25
RTG3YBL103C YOR059CQ08448 450 aaKnown RBP7.24□□□□□ -1.25
RTG3YBL103C HEM13P11353 328 aaKnown RBP7.23□□□□□ -1.25
RTG3YBL103C OYE3P41816 400 aaPredicted RBP7.23□□□□□ -1.25
RTG3YBL103C NSI1Q12457 570 aa7.23□□□□□ -1.25
RTG3YBL103C PIC2P40035 300 aa7.22□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms