RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W ECM29P38737 1868 aa7.07□□□□□ -1.28
SHP1YBL058W MPH3P0CE00 602 aa7.07□□□□□ -1.28
SHP1YBL058W GCD7P32502 381 aaPredicted RBP7.07□□□□□ -1.28
SHP1YBL058W AFG3P39925 761 aa7.07□□□□□ -1.28
SHP1YBL058W TIF4631P39935 952 aaKnown RBP7.07□□□□□ -1.28
SHP1YBL058W MET7Q08645 548 aa7.07□□□□□ -1.28
SHP1YBL058W SUT2Q12286 268 aa7.07□□□□□ -1.28
SHP1YBL058W TUS1Q06412 1307 aa7.06□□□□□ -1.28
SHP1YBL058W PRE10P21242 288 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
SHP1YBL058W EUG1P32474 517 aa7.06□□□□□ -1.28
SHP1YBL058W UIP5P36137 443 aa7.06□□□□□ -1.28
SHP1YBL058W GPB2P39717 880 aa7.06□□□□□ -1.28
SHP1YBL058W FUN12P39730 1002 aaKnown RBP7.06□□□□□ -1.28
SHP1YBL058W YRB30P53107 440 aaPredicted RBP7.06□□□□□ -1.28
SHP1YBL058W CDC45Q08032 650 aa7.06□□□□□ -1.28
SHP1YBL058W MDM20Q12387 796 aaKnown RBP7.06□□□□□ -1.28
SHP1YBL058W PBS2P08018 668 aa7.05□□□□□ -1.28
SHP1YBL058W EAP1P36041 632 aaKnown RBP7.05□□□□□ -1.28
SHP1YBL058W YML037CQ03703 340 aa7.05□□□□□ -1.28
SHP1YBL058W MAM3Q12296 706 aa7.05□□□□□ -1.28
SHP1YBL058W VMA2P16140 517 aaKnown RBP7.04□□□□□ -1.28
SHP1YBL058W PRE8P23639 250 aa7.04□□□□□ -1.28
SHP1YBL058W RGT1P32862 1170 aa7.04□□□□□ -1.28
SHP1YBL058W BCK2P33306 851 aa7.04□□□□□ -1.28
SHP1YBL058W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
SHP1YBL058W BCS1P32839 456 aa7.03□□□□□ -1.28
SHP1YBL058W MSC7P38694 644 aa7.03□□□□□ -1.28
SHP1YBL058W YMR147WP40218 223 aaKnown RBP7.03□□□□□ -1.28
SHP1YBL058W YJR107WP47145 328 aa7.03□□□□□ -1.28
SHP1YBL058W YGL242CP53066 181 aa7.03□□□□□ -1.28
SHP1YBL058W DUS4Q06063 367 aa7.03□□□□□ -1.28
SHP1YBL058W YPL260WQ08977 551 aa7.03□□□□□ -1.28
SHP1YBL058W NCB2Q92317 146 aa7.03□□□□□ -1.28
SHP1YBL058W SRM1P21827 482 aa7.02□□□□□ -1.29
SHP1YBL058W SKG3Q06315 1026 aa7.02□□□□□ -1.29
SHP1YBL058W CDC19P00549 500 aaKnown RBP7.01□□□□□ -1.29
SHP1YBL058W HIP1P06775 603 aa7.01□□□□□ -1.29
SHP1YBL058W SEC61P32915 480 aa7.01□□□□□ -1.29
SHP1YBL058W KTR2P33550 425 aa7.01□□□□□ -1.29
SHP1YBL058W YKR018CP36114 725 aa7.01□□□□□ -1.29
SHP1YBL058W EDS1P38073 919 aa7.01□□□□□ -1.29
SHP1YBL058W KSP1P38691 1029 aaKnown RBP7.01□□□□□ -1.29
SHP1YBL058W IOC3P43596 787 aa7.01□□□□□ -1.29
SHP1YBL058W BDP1P46678 594 aa7.01□□□□□ -1.29
SHP1YBL058W PTK2P47116 818 aaKnown RBP7.01□□□□□ -1.29
SHP1YBL058W ALO1P54783 526 aaKnown RBP7.01□□□□□ -1.29
SHP1YBL058W TOM71P38825 639 aaKnown RBP7□□□□□ -1.29
SHP1YBL058W IRC8P47046 822 aa7□□□□□ -1.29
SHP1YBL058W SOL4P53315 255 aa7□□□□□ -1.29
SHP1YBL058W YNL035CP53962 389 aaKnown RBP7□□□□□ -1.29
SHP1YBL058W BUL2Q03758 920 aaKnown RBP7□□□□□ -1.29
SHP1YBL058W AHC1Q12433 566 aa7□□□□□ -1.29
SHP1YBL058W YMR084WA2P2R3 262 aa6.99□□□□□ -1.29
SHP1YBL058W NOT3P06102 836 aaKnown RBP6.99□□□□□ -1.29
SHP1YBL058W CHS3P29465 1165 aa6.99□□□□□ -1.29
SHP1YBL058W UTR4P32626 227 aa6.99□□□□□ -1.29
SHP1YBL058W YHL050CP38721 697 aa6.99□□□□□ -1.29
SHP1YBL058W KAR5Q04746 504 aa6.99□□□□□ -1.29
SHP1YBL058W RAD2P07276 1031 aa6.98□□□□□ -1.29
SHP1YBL058W HEM1P09950 548 aaPredicted RBP6.98□□□□□ -1.29
SHP1YBL058W MIP1P15801 1254 aa6.98□□□□□ -1.29
SHP1YBL058W SAM2P19358 384 aaKnown RBP6.98□□□□□ -1.29
SHP1YBL058W SRP40P32583 406 aaPredicted RBP6.98□□□□□ -1.29
SHP1YBL058W PTC3P34221 468 aaKnown RBP6.98□□□□□ -1.29
SHP1YBL058W VID27P40157 782 aa6.98□□□□□ -1.29
SHP1YBL058W MLC1P53141 149 aa6.98□□□□□ -1.29
SHP1YBL058W PIB2P53191 635 aa6.98□□□□□ -1.29
SHP1YBL058W YGR125WP53273 1036 aa6.98□□□□□ -1.29
SHP1YBL058W ALD6P54115 500 aaKnown RBP6.98□□□□□ -1.29
SHP1YBL058W RMD1Q03441 430 aa6.98□□□□□ -1.29
SHP1YBL058W UBR2Q07963 1872 aa6.98□□□□□ -1.29
SHP1YBL058W PDR18P53756 1333 aa6.98□□□□□ -1.29
SHP1YBL058W PBY1P38254 753 aa6.97□□□□□ -1.29
SHP1YBL058W PES4P39684 611 aa6.97□□□□□ -1.29
SHP1YBL058W REF2P42073 533 aaPredicted RBP6.97□□□□□ -1.29
SHP1YBL058W ATH1P48016 1211 aa6.97□□□□□ -1.29
SHP1YBL058W PUF6Q04373 656 aaKnown RBP6.97□□□□□ -1.29
SHP1YBL058W YOL036WQ08206 761 aa6.97□□□□□ -1.29
SHP1YBL058W YDR461C-AQ2V2P7 80 aa6.97□□□□□ -1.29
SHP1YBL058W YDR034W-BQ6Q5X2 51 aa6.97□□□□□ -1.29
SHP1YBL058W SAM1P10659 382 aaKnown RBP6.96□□□□□ -1.3
SHP1YBL058W RAD18P10862 487 aa6.96□□□□□ -1.3
SHP1YBL058W ACE2P21192 770 aa6.96□□□□□ -1.3
SHP1YBL058W ECM21P38167 1117 aaKnown RBP6.96□□□□□ -1.3
SHP1YBL058W RTS1P38903 757 aa6.96□□□□□ -1.3
SHP1YBL058W CHO2P05374 869 aaKnown RBP6.95□□□□□ -1.3
SHP1YBL058W VMA1P17255 1071 aaKnown RBP6.95□□□□□ -1.3
SHP1YBL058W COQ1P18900 473 aa6.95□□□□□ -1.3
SHP1YBL058W TIM23P32897 222 aa6.95□□□□□ -1.3
SHP1YBL058W SHP1P34223 423 aa6.95□□□□□ -1.3
SHP1YBL058W GRS1P38088 690 aaKnown RBP6.95□□□□□ -1.3
SHP1YBL058W DSF2P38213 736 aa6.95□□□□□ -1.3
SHP1YBL058W NMD2P38798 1089 aaKnown RBP6.95□□□□□ -1.3
SHP1YBL058W FPR3P38911 411 aaKnown RBP6.95□□□□□ -1.3
SHP1YBL058W NOC2P39744 710 aaKnown RBP6.95□□□□□ -1.3
SHP1YBL058W SKP2P42843 763 aa6.95□□□□□ -1.3
SHP1YBL058W ENP2P48234 707 aaKnown RBP6.95□□□□□ -1.3
SHP1YBL058W SCS3P53012 380 aa6.95□□□□□ -1.3
SHP1YBL058W MRD1Q06106 887 aaKnown RBP6.95□□□□□ -1.3
SHP1YBL058W RAD61Q99359 647 aa6.95□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms