RNA–Protein interactions for RNA: ENST00000639418.1

SPIN3-221, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-221ENST00000639418 IFT57Q9NWB7 429 aa16.5■□□□□ 0.23
SPIN3-221ENST00000639418 ANKRD45Q5TZF3 282 aa16.49■□□□□ 0.23
SPIN3-221ENST00000639418 GCC1Q96CN9 775 aa16.49■□□□□ 0.23
SPIN3-221ENST00000639418 PTCH1Q13635 1447 aa16.49■□□□□ 0.23
SPIN3-221ENST00000639418 IL13P35225 146 aa16.49■□□□□ 0.23
SPIN3-221ENST00000639418 BMP2KLQ5H9B9 411 aa16.49■□□□□ 0.23
SPIN3-221ENST00000639418 C1orf115Q9H7X2 142 aa16.49■□□□□ 0.23
SPIN3-221ENST00000639418 HSP90AA2PQ14568 343 aaPredicted RBP16.48■□□□□ 0.23
SPIN3-221ENST00000639418 MBIPQ9NS73 344 aa16.48■□□□□ 0.23
SPIN3-221ENST00000639418 PIK3R4Q99570 1358 aa16.48■□□□□ 0.23
SPIN3-221ENST00000639418 A2ML1A8K2U0 1454 aa16.48■□□□□ 0.23
SPIN3-221ENST00000639418 ELL2O00472 640 aaPredicted RBP16.48■□□□□ 0.23
SPIN3-221ENST00000639418 NME9Q86XW9 330 aa16.48■□□□□ 0.23
SPIN3-221ENST00000639418 EDC4Q6P2E9 1401 aaKnown RBP16.48■□□□□ 0.23
SPIN3-221ENST00000639418 RIMBP3CA6NJZ7 1639 aa16.47■□□□□ 0.23
SPIN3-221ENST00000639418 RIMBP3BA6NNM3 1639 aa16.47■□□□□ 0.23
SPIN3-221ENST00000639418 RIMBP3Q9UFD9 1639 aa16.47■□□□□ 0.23
SPIN3-221ENST00000639418 RIMS2Q9UQ26 1411 aa16.47■□□□□ 0.23
SPIN3-221ENST00000639418 ZNF853P0CG23 659 aa16.47■□□□□ 0.23
SPIN3-221ENST00000639418 CPSF1Q10570 1443 aaKnown RBP16.47■□□□□ 0.23
SPIN3-221ENST00000639418 SETD1AO15047 1707 aaKnown RBP16.46■□□□□ 0.23
SPIN3-221ENST00000639418 CDK12Q9NYV4 1490 aaPredicted RBP16.46■□□□□ 0.23
SPIN3-221ENST00000639418 SNX21Q969T3 373 aa16.46■□□□□ 0.23
SPIN3-221ENST00000639418 ZNF692Q9BU19 519 aaPredicted RBP16.46■□□□□ 0.23
SPIN3-221ENST00000639418 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
SPIN3-221ENST00000639418 ABCC4O15439 1325 aa16.46■□□□□ 0.22
SPIN3-221ENST00000639418 NCOA3Q9Y6Q9 1424 aa16.46■□□□□ 0.22
SPIN3-221ENST00000639418 WASLO00401 505 aaPredicted RBP16.45■□□□□ 0.22
SPIN3-221ENST00000639418 RBM10P98175 930 aaKnown RBP16.45■□□□□ 0.22
SPIN3-221ENST00000639418 TWISTNBQ3B726 338 aaPredicted RBP16.45■□□□□ 0.22
SPIN3-221ENST00000639418 GZF1Q9H116 711 aaPredicted RBP16.45■□□□□ 0.22
SPIN3-221ENST00000639418 GOLGA6L3A6NEY3 463 aa16.45■□□□□ 0.22
SPIN3-221ENST00000639418 TRAK2O60296 914 aa16.44■□□□□ 0.22
SPIN3-221ENST00000639418 LMOD3Q0VAK6 560 aa16.44■□□□□ 0.22
SPIN3-221ENST00000639418 SIRT2Q8IXJ6 389 aa16.44■□□□□ 0.22
SPIN3-221ENST00000639418 CFAP44Q96MT7 982 aa16.44■□□□□ 0.22
SPIN3-221ENST00000639418 ARXQ96QS3 562 aa16.44■□□□□ 0.22
SPIN3-221ENST00000639418 AATKQ6ZMQ8 1374 aa16.44■□□□□ 0.22
SPIN3-221ENST00000639418 DDIT3P35638 169 aa16.44■□□□□ 0.22
SPIN3-221ENST00000639418 C8orf58Q8NAV2 365 aa16.44■□□□□ 0.22
SPIN3-221ENST00000639418 COG3Q96JB2 828 aa16.43■□□□□ 0.22
SPIN3-221ENST00000639418 RRP9O43818 475 aaKnown RBP16.43■□□□□ 0.22
SPIN3-221ENST00000639418 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
SPIN3-221ENST00000639418 FSD2A1L4K1 749 aa16.42■□□□□ 0.22
SPIN3-221ENST00000639418 SPATA31D1Q6ZQQ2 1576 aa16.42■□□□□ 0.22
SPIN3-221ENST00000639418 DLG5Q8TDM6 1919 aa16.42■□□□□ 0.22
SPIN3-221ENST00000639418 DDX11L8A8MPP1 907 aa16.42■□□□□ 0.22
SPIN3-221ENST00000639418 HSP90AB1P08238 724 aaKnown RBP16.42■□□□□ 0.22
SPIN3-221ENST00000639418 RRS1Q15050 365 aaKnown RBP16.42■□□□□ 0.22
SPIN3-221ENST00000639418 API5Q9BZZ5 524 aaKnown RBP16.42■□□□□ 0.22
SPIN3-221ENST00000639418 FAM83GA6ND36 823 aa16.41■□□□□ 0.22
SPIN3-221ENST00000639418 XRCC6P12956 609 aaKnown RBP eCLIP16.41■□□□□ 0.22
SPIN3-221ENST00000639418 TBC1D9Q6ZT07 1266 aa16.41■□□□□ 0.22
SPIN3-221ENST00000639418 NUDT16Q96DE0 195 aaKnown RBP16.41■□□□□ 0.22
SPIN3-221ENST00000639418 FGD1P98174 961 aa16.41■□□□□ 0.22
SPIN3-221ENST00000639418 KIF2CQ99661 725 aa16.41■□□□□ 0.22
SPIN3-221ENST00000639418 TXNDC2Q86VQ3 553 aa16.4■□□□□ 0.22
SPIN3-221ENST00000639418 NCKAP5LQ9HCH0 1330 aa16.4■□□□□ 0.22
SPIN3-221ENST00000639418 METP08581 1390 aa16.4■□□□□ 0.22
SPIN3-221ENST00000639418 CPS1P31327 1500 aa16.4■□□□□ 0.22
SPIN3-221ENST00000639418 AGLP35573 1532 aa16.4■□□□□ 0.22
SPIN3-221ENST00000639418 REREQ9P2R6 1566 aa16.4■□□□□ 0.22
SPIN3-221ENST00000639418 NRXN3Q9Y4C0 1643 aa16.39■□□□□ 0.21
SPIN3-221ENST00000639418 FAM69CQ0P6D2 419 aa16.39■□□□□ 0.21
SPIN3-221ENST00000639418 DCTN1Q14203 1278 aa16.39■□□□□ 0.21
SPIN3-221ENST00000639418 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
SPIN3-221ENST00000639418 MON2Q7Z3U7 1717 aa16.38■□□□□ 0.21
SPIN3-221ENST00000639418 PDE4CQ08493 712 aa16.38■□□□□ 0.21
SPIN3-221ENST00000639418 CIZ1Q9ULV3 898 aaPredicted RBP16.38■□□□□ 0.21
SPIN3-221ENST00000639418 MLECQ14165 292 aa16.38■□□□□ 0.21
SPIN3-221ENST00000639418 TNPO1Q92973 898 aaKnown RBP16.38■□□□□ 0.21
SPIN3-221ENST00000639418 HSP90AA1P07900 732 aaKnown RBP16.37■□□□□ 0.21
SPIN3-221ENST00000639418 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
SPIN3-221ENST00000639418 CDC45O75419 566 aa16.36■□□□□ 0.21
SPIN3-221ENST00000639418 CD2BP2O95400 341 aaKnown RBP16.36■□□□□ 0.21
SPIN3-221ENST00000639418 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.36■□□□□ 0.21
SPIN3-221ENST00000639418 KIF24Q5T7B8 1368 aa16.36■□□□□ 0.21
SPIN3-221ENST00000639418 KNDC1Q76NI1 1749 aa16.36■□□□□ 0.21
SPIN3-221ENST00000639418 PANK2Q9BZ23 570 aa16.36■□□□□ 0.21
SPIN3-221ENST00000639418 C3P01024 1663 aa16.35■□□□□ 0.21
SPIN3-221ENST00000639418 K7ELQ4 463 aaPredicted RBP16.35■□□□□ 0.21
SPIN3-221ENST00000639418 RAB3GAP1Q15042 981 aa16.35■□□□□ 0.21
SPIN3-221ENST00000639418 NAP1L5Q96NT1 182 aaPredicted RBP16.35■□□□□ 0.21
SPIN3-221ENST00000639418 ITSN1Q15811 1721 aa16.35■□□□□ 0.21
SPIN3-221ENST00000639418 GBP4Q96PP9 640 aa16.35■□□□□ 0.21
SPIN3-221ENST00000639418 RBM42Q9BTD8 480 aaKnown RBP16.35■□□□□ 0.21
SPIN3-221ENST00000639418 RRAGDQ9NQL2 400 aaPredicted RBP16.35■□□□□ 0.21
SPIN3-221ENST00000639418 AKAP12Q02952 1782 aa16.35■□□□□ 0.21
SPIN3-221ENST00000639418 GSPT1P15170 499 aaKnown RBP16.34■□□□□ 0.21
SPIN3-221ENST00000639418 MRE11P49959 708 aa16.34■□□□□ 0.21
SPIN3-221ENST00000639418 PLEKHM2Q8IWE5 1019 aa16.34■□□□□ 0.21
SPIN3-221ENST00000639418 DCTPP1Q9H773 170 aa16.34■□□□□ 0.21
SPIN3-221ENST00000639418 FOXD4L1Q9NU39 408 aa16.34■□□□□ 0.21
SPIN3-221ENST00000639418 TSPOAP1O95153 1857 aa16.34■□□□□ 0.21
SPIN3-221ENST00000639418 INTS3Q68E01 1043 aaKnown RBP16.34■□□□□ 0.21
SPIN3-221ENST00000639418 AEBP1Q8IUX7 1158 aa16.33■□□□□ 0.21
SPIN3-221ENST00000639418 SIRT1Q96EB6 747 aa16.33■□□□□ 0.2
SPIN3-221ENST00000639418 EIF4A2Q14240 407 aaKnown RBP16.32■□□□□ 0.2
SPIN3-221ENST00000639418 SULT6B1Q6IMI4 303 aa16.32■□□□□ 0.2
SPIN3-221ENST00000639418 NRKQ7Z2Y5 1582 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms