RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 SDSP20132 328 aa11.65□□□□□ -0.54
TPM1-233ENST00000610733 PRIM1P49642 420 aaKnown RBP11.65□□□□□ -0.54
TPM1-233ENST00000610733 STK3Q13188 491 aa11.65□□□□□ -0.54
TPM1-233ENST00000610733 TRMT2AQ8IZ69 625 aaKnown RBP11.65□□□□□ -0.54
TPM1-233ENST00000610733 ANTXR1Q9H6X2 564 aa11.65□□□□□ -0.54
TPM1-233ENST00000610733 UGGT1Q9NYU2 1555 aa11.65□□□□□ -0.54
TPM1-233ENST00000610733 NPHP1O15259 732 aa11.64□□□□□ -0.55
TPM1-233ENST00000610733 HSP90B1P14625 803 aaKnown RBP11.64□□□□□ -0.55
TPM1-233ENST00000610733 WDR7Q9Y4E6 1490 aa11.64□□□□□ -0.55
TPM1-233ENST00000610733 CWC27Q6UX04 472 aaKnown RBP11.64□□□□□ -0.55
TPM1-233ENST00000610733 SIL1Q9H173 461 aa11.64□□□□□ -0.55
TPM1-233ENST00000610733 UQCRHLA0A096LP55 91 aa11.64□□□□□ -0.55
TPM1-233ENST00000610733 UQCRHP07919 91 aa11.64□□□□□ -0.55
TPM1-233ENST00000610733 HDAC1Q13547 482 aaPredicted RBP11.64□□□□□ -0.55
TPM1-233ENST00000610733 BMP2KLQ5H9B9 411 aa11.64□□□□□ -0.55
TPM1-233ENST00000610733 SYAP1Q96A49 352 aaPredicted RBP11.64□□□□□ -0.55
TPM1-233ENST00000610733 STAC3Q96MF2 364 aa11.64□□□□□ -0.55
TPM1-233ENST00000610733 RRP9O43818 475 aaKnown RBP11.63□□□□□ -0.55
TPM1-233ENST00000610733 SMC5Q8IY18 1101 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 TSC1Q92574 1164 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 DIAPH3Q9NSV4 1193 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 ERC2O15083 957 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 VAMP4O75379 141 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 NLRP6P59044 892 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 CCDC173Q0VFZ6 552 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 HSP90AB2PQ58FF8 381 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 OSCARQ8IYS5 282 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 TCEANC2Q96MN5 208 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 POLKQ9UBT6 870 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 ADGRL2O95490 1459 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 ZRSR1Q15695 479 aaKnown RBP11.63□□□□□ -0.55
TPM1-233ENST00000610733 NINLQ9Y2I6 1382 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 PIK3C2GO75747 1445 aa11.63□□□□□ -0.55
TPM1-233ENST00000610733 CHAF1AQ13111 956 aaPredicted RBP11.62□□□□□ -0.55
TPM1-233ENST00000610733 ZSCAN30Q86W11 494 aa11.62□□□□□ -0.55
TPM1-233ENST00000610733 USP25Q9UHP3 1055 aa11.62□□□□□ -0.55
TPM1-233ENST00000610733 SPG7Q9UQ90 795 aa11.62□□□□□ -0.55
TPM1-233ENST00000610733 CPA1P15085 419 aa11.62□□□□□ -0.55
TPM1-233ENST00000610733 C17orf53Q8N3J3 647 aaPredicted RBP11.62□□□□□ -0.55
TPM1-233ENST00000610733 ABCC10Q5T3U5 1492 aa11.62□□□□□ -0.55
TPM1-233ENST00000610733 UBTFL1P0CB47 393 aaPredicted RBP11.62□□□□□ -0.55
TPM1-233ENST00000610733 PTMSP20962 102 aa11.62□□□□□ -0.55
TPM1-233ENST00000610733 CLCN1P35523 988 aa11.62□□□□□ -0.55
TPM1-233ENST00000610733 CAMK4Q16566 473 aa11.62□□□□□ -0.55
TPM1-233ENST00000610733 ZSCAN23Q3MJ62 389 aa11.62□□□□□ -0.55
TPM1-233ENST00000610733 C9orf78Q9NZ63 289 aaPredicted RBP11.62□□□□□ -0.55
TPM1-233ENST00000610733 SMC3Q9UQE7 1217 aa11.62□□□□□ -0.55
TPM1-233ENST00000610733 POLR3AO14802 1390 aaPredicted RBP11.62□□□□□ -0.55
TPM1-233ENST00000610733 ITSN2Q9NZM3 1697 aa11.61□□□□□ -0.55
TPM1-233ENST00000610733 A0A1W2PP64 1363 aa11.61□□□□□ -0.55
TPM1-233ENST00000610733 HAP1P54257 671 aaPredicted RBP11.61□□□□□ -0.55
TPM1-233ENST00000610733 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.61□□□□□ -0.55
TPM1-233ENST00000610733 FAM69CQ0P6D2 419 aa11.61□□□□□ -0.55
TPM1-233ENST00000610733 ERBB4Q15303 1308 aa11.61□□□□□ -0.55
TPM1-233ENST00000610733 ZBTB7BO15156 539 aaPredicted RBP11.6□□□□□ -0.55
TPM1-233ENST00000610733 NUDT16Q96DE0 195 aaKnown RBP11.6□□□□□ -0.55
TPM1-233ENST00000610733 G2E3Q7L622 706 aa11.6□□□□□ -0.55
TPM1-233ENST00000610733 STK11IPQ8N1F8 1099 aa11.6□□□□□ -0.55
TPM1-233ENST00000610733 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
TPM1-233ENST00000610733 JARID2Q92833 1246 aaPredicted RBP11.6□□□□□ -0.55
TPM1-233ENST00000610733 ADGRL1O94910 1474 aa11.6□□□□□ -0.55
TPM1-233ENST00000610733 IGSF3O75054 1194 aa11.59□□□□□ -0.55
TPM1-233ENST00000610733 GNAI2P04899 355 aa11.59□□□□□ -0.55
TPM1-233ENST00000610733 PLEKHM2Q8IWE5 1019 aa11.59□□□□□ -0.55
TPM1-233ENST00000610733 ZBTB9Q96C00 473 aa11.59□□□□□ -0.55
TPM1-233ENST00000610733 RBSNQ9H1K0 784 aa11.59□□□□□ -0.55
TPM1-233ENST00000610733 INSRP06213 1382 aa11.59□□□□□ -0.55
TPM1-233ENST00000610733 PBRM1Q86U86 1689 aa11.59□□□□□ -0.55
TPM1-233ENST00000610733 TARBP1Q13395 1621 aaKnown RBP11.59□□□□□ -0.55
TPM1-233ENST00000610733 SRGAP3O43295 1099 aa11.59□□□□□ -0.55
TPM1-233ENST00000610733 RAB3GAP1Q15042 981 aa11.59□□□□□ -0.55
TPM1-233ENST00000610733 LRRCC1Q9C099 1032 aa11.59□□□□□ -0.55
TPM1-233ENST00000610733 LRRFIP2Q9Y608 721 aaKnown RBP11.59□□□□□ -0.55
TPM1-233ENST00000610733 TEFQ10587 303 aa11.59□□□□□ -0.55
TPM1-233ENST00000610733 TSPY26PQ9H489 355 aa11.59□□□□□ -0.55
TPM1-233ENST00000610733 TTC22Q5TAA0 569 aa11.58□□□□□ -0.56
TPM1-233ENST00000610733 GSPT1P15170 499 aaKnown RBP11.58□□□□□ -0.56
TPM1-233ENST00000610733 HDGFL1Q5TGJ6 251 aa11.58□□□□□ -0.56
TPM1-233ENST00000610733 CCDC83Q8IWF9 413 aa11.58□□□□□ -0.56
TPM1-233ENST00000610733 BICD2Q8TD16 824 aa11.58□□□□□ -0.56
TPM1-233ENST00000610733 TTC12Q9H892 705 aaPredicted RBP11.58□□□□□ -0.56
TPM1-233ENST00000610733 CIZ1Q9ULV3 898 aaPredicted RBP11.58□□□□□ -0.56
TPM1-233ENST00000610733 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.56
TPM1-233ENST00000610733 ZHX1Q9UKY1 873 aaPredicted RBP11.58□□□□□ -0.56
TPM1-233ENST00000610733 FANCAO15360 1455 aa11.58□□□□□ -0.56
TPM1-233ENST00000610733 CEP170Q5SW79 1584 aa11.57□□□□□ -0.56
TPM1-233ENST00000610733 IFIT2P09913 472 aaKnown RBP11.57□□□□□ -0.56
TPM1-233ENST00000610733 CT47B1P0C2W7 299 aaPredicted RBP11.57□□□□□ -0.56
TPM1-233ENST00000610733 HCLS1P14317 486 aaPredicted RBP11.57□□□□□ -0.56
TPM1-233ENST00000610733 MAPK8IP2Q13387 824 aaPredicted RBP11.57□□□□□ -0.56
TPM1-233ENST00000610733 TMX3Q96JJ7 454 aa11.57□□□□□ -0.56
TPM1-233ENST00000610733 RTEL1-TNFRSF6BF6WH68 1400 aa11.57□□□□□ -0.56
TPM1-233ENST00000610733 FMNL2Q96PY5 1086 aa11.57□□□□□ -0.56
TPM1-233ENST00000610733 IFT57Q9NWB7 429 aa11.57□□□□□ -0.56
TPM1-233ENST00000610733 KDM5DQ9BY66 1539 aa11.57□□□□□ -0.56
TPM1-233ENST00000610733 ALDH1L2Q3SY69 923 aa11.56□□□□□ -0.56
TPM1-233ENST00000610733 PTPRTO14522 1441 aa11.56□□□□□ -0.56
TPM1-233ENST00000610733 KLHL40Q2TBA0 621 aa11.56□□□□□ -0.56
TPM1-233ENST00000610733 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
TPM1-233ENST00000610733 MX1P20591 662 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms