RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 ARHGAP31Q2M1Z3 1444 aa19.1■□□□□ 0.65
SAFB-205ENST00000588852 TBC1D9Q6ZT07 1266 aa19.1■□□□□ 0.65
SAFB-205ENST00000588852 TWISTNBQ3B726 338 aaPredicted RBP19.1■□□□□ 0.65
SAFB-205ENST00000588852 PNNQ9H307 717 aaKnown RBP19.1■□□□□ 0.65
SAFB-205ENST00000588852 IL13P35225 146 aa19.09■□□□□ 0.65
SAFB-205ENST00000588852 L1TD1Q5T7N2 865 aaKnown RBP19.09■□□□□ 0.65
SAFB-205ENST00000588852 C16orf71Q8IYS4 520 aaPredicted RBP19.09■□□□□ 0.65
SAFB-205ENST00000588852 TNPO1Q92973 898 aaKnown RBP19.09■□□□□ 0.65
SAFB-205ENST00000588852 ALKQ9UM73 1620 aa19.09■□□□□ 0.65
SAFB-205ENST00000588852 FSD2A1L4K1 749 aa19.09■□□□□ 0.65
SAFB-205ENST00000588852 HSP90AB1P08238 724 aaKnown RBP19.09■□□□□ 0.65
SAFB-205ENST00000588852 TXNDC2Q86VQ3 553 aa19.09■□□□□ 0.65
SAFB-205ENST00000588852 CFAP74Q9C0B2 1584 aa19.09■□□□□ 0.65
SAFB-205ENST00000588852 APBB1O00213 710 aa19.08■□□□□ 0.64
SAFB-205ENST00000588852 BMP2KLQ5H9B9 411 aa19.08■□□□□ 0.64
SAFB-205ENST00000588852 NUTM2FA1L443 756 aa19.07■□□□□ 0.64
SAFB-205ENST00000588852 DDIT3P35638 169 aa19.07■□□□□ 0.64
SAFB-205ENST00000588852 MAP2P11137 1827 aaKnown RBP19.07■□□□□ 0.64
SAFB-205ENST00000588852 MED14O60244 1454 aa19.07■□□□□ 0.64
SAFB-205ENST00000588852 AEBP1Q8IUX7 1158 aa19.06■□□□□ 0.64
SAFB-205ENST00000588852 PREX1Q8TCU6 1659 aa19.05■□□□□ 0.64
SAFB-205ENST00000588852 HSP90AA1P07900 732 aaKnown RBP19.05■□□□□ 0.64
SAFB-205ENST00000588852 ANKRD26Q9UPS8 1709 aa19.05■□□□□ 0.64
SAFB-205ENST00000588852 GNAI1P63096 354 aa19.05■□□□□ 0.64
SAFB-205ENST00000588852 OTUD7AQ8TE49 926 aaPredicted RBP19.05■□□□□ 0.64
SAFB-205ENST00000588852 NEO1Q92859 1461 aa19.04■□□□□ 0.64
SAFB-205ENST00000588852 SOX12O15370 315 aa19.04■□□□□ 0.64
SAFB-205ENST00000588852 GSPT1P15170 499 aaKnown RBP19.04■□□□□ 0.64
SAFB-205ENST00000588852 ZNF853P0CG23 659 aa19.04■□□□□ 0.64
SAFB-205ENST00000588852 IFT57Q9NWB7 429 aa19.03■□□□□ 0.64
SAFB-205ENST00000588852 GAS2L3Q86XJ1 694 aa19.03■□□□□ 0.64
SAFB-205ENST00000588852 GCC1Q96CN9 775 aa19.03■□□□□ 0.64
SAFB-205ENST00000588852 GAS2L2Q8NHY3 880 aa19.02■□□□□ 0.64
SAFB-205ENST00000588852 DNAJC5Q9H3Z4 198 aa19.02■□□□□ 0.64
SAFB-205ENST00000588852 SNX21Q969T3 373 aa19.02■□□□□ 0.64
SAFB-205ENST00000588852 ABCC4O15439 1325 aa19.02■□□□□ 0.63
SAFB-205ENST00000588852 BRPF1P55201 1214 aaPredicted RBP19.01■□□□□ 0.63
SAFB-205ENST00000588852 KIF20BQ96Q89 1820 aa19.01■□□□□ 0.63
SAFB-205ENST00000588852 NCOA3Q9Y6Q9 1424 aa19.01■□□□□ 0.63
SAFB-205ENST00000588852 RICTORQ6R327 1708 aa19.01■□□□□ 0.63
SAFB-205ENST00000588852 MCM10Q7L590 875 aa19.01■□□□□ 0.63
SAFB-205ENST00000588852 CFAP44Q96MT7 982 aa19.01■□□□□ 0.63
SAFB-205ENST00000588852 WASLO00401 505 aaPredicted RBP19.01■□□□□ 0.63
SAFB-205ENST00000588852 SMARCA5O60264 1052 aaPredicted RBP19.01■□□□□ 0.63
SAFB-205ENST00000588852 MIS18AQ9NYP9 233 aa19.01■□□□□ 0.63
SAFB-205ENST00000588852 CLTCQ00610 1675 aaKnown RBP19.01■□□□□ 0.63
SAFB-205ENST00000588852 SSFA2P28290 1259 aa19■□□□□ 0.63
SAFB-205ENST00000588852 NUDT16Q96DE0 195 aaKnown RBP19■□□□□ 0.63
SAFB-205ENST00000588852 ARHGAP45Q92619 1136 aa19■□□□□ 0.63
SAFB-205ENST00000588852 PLEKHM2Q8IWE5 1019 aa18.99■□□□□ 0.63
SAFB-205ENST00000588852 METP08581 1390 aa18.99■□□□□ 0.63
SAFB-205ENST00000588852 PTCH1Q13635 1447 aa18.99■□□□□ 0.63
SAFB-205ENST00000588852 COG3Q96JB2 828 aa18.99■□□□□ 0.63
SAFB-205ENST00000588852 GRPEL1Q9HAV7 217 aa18.99■□□□□ 0.63
SAFB-205ENST00000588852 SULT6B1Q6IMI4 303 aa18.98■□□□□ 0.63
SAFB-205ENST00000588852 DDX11L8A8MPP1 907 aa18.98■□□□□ 0.63
SAFB-205ENST00000588852 RAB3GAP1Q15042 981 aa18.98■□□□□ 0.63
SAFB-205ENST00000588852 ZNF428Q96B54 188 aa18.98■□□□□ 0.63
SAFB-205ENST00000588852 K7ELQ4 463 aaPredicted RBP18.97■□□□□ 0.63
SAFB-205ENST00000588852 CPS1P31327 1500 aa18.97■□□□□ 0.63
SAFB-205ENST00000588852 PIK3R4Q99570 1358 aa18.97■□□□□ 0.63
SAFB-205ENST00000588852 AK9Q5TCS8 1911 aa18.96■□□□□ 0.63
SAFB-205ENST00000588852 CALD1Q05682 793 aaKnown RBP18.96■□□□□ 0.63
SAFB-205ENST00000588852 RIMS2Q9UQ26 1411 aa18.96■□□□□ 0.62
SAFB-205ENST00000588852 FAM69CQ0P6D2 419 aa18.95■□□□□ 0.62
SAFB-205ENST00000588852 CDC42BPGQ6DT37 1551 aa18.95■□□□□ 0.62
SAFB-205ENST00000588852 CDC45O75419 566 aa18.95■□□□□ 0.62
SAFB-205ENST00000588852 CPSF1Q10570 1443 aaKnown RBP18.94■□□□□ 0.62
SAFB-205ENST00000588852 MRE11P49959 708 aa18.94■□□□□ 0.62
SAFB-205ENST00000588852 PKP1Q13835 747 aa18.94■□□□□ 0.62
SAFB-205ENST00000588852 DLG5Q8TDM6 1919 aa18.94■□□□□ 0.62
SAFB-205ENST00000588852 KNDC1Q76NI1 1749 aa18.93■□□□□ 0.62
SAFB-205ENST00000588852 EIF4A2Q14240 407 aaKnown RBP18.93■□□□□ 0.62
SAFB-205ENST00000588852 CHAMP1Q96JM3 812 aa18.93■□□□□ 0.62
SAFB-205ENST00000588852 MEIS3Q99687 375 aa18.93■□□□□ 0.62
SAFB-205ENST00000588852 API5Q9BZZ5 524 aaKnown RBP18.93■□□□□ 0.62
SAFB-205ENST00000588852 A2ML1A8K2U0 1454 aa18.93■□□□□ 0.62
SAFB-205ENST00000588852 ERBB4Q15303 1308 aa18.93■□□□□ 0.62
SAFB-205ENST00000588852 PRR36Q9H6K5 1346 aa18.93■□□□□ 0.62
SAFB-205ENST00000588852 ATP7BP35670 1465 aa18.93■□□□□ 0.62
SAFB-205ENST00000588852 HSP90AB2PQ58FF8 381 aa18.93■□□□□ 0.62
SAFB-205ENST00000588852 UBE2Q2Q8WVN8 375 aa18.93■□□□□ 0.62
SAFB-205ENST00000588852 DCTPP1Q9H773 170 aa18.93■□□□□ 0.62
SAFB-205ENST00000588852 CCDC61Q9Y6R9 512 aa18.93■□□□□ 0.62
SAFB-205ENST00000588852 FOXO3O43524 673 aa18.92■□□□□ 0.62
SAFB-205ENST00000588852 EDC4Q6P2E9 1401 aaKnown RBP18.92■□□□□ 0.62
SAFB-205ENST00000588852 GBP4Q96PP9 640 aa18.92■□□□□ 0.62
SAFB-205ENST00000588852 F6X3S4 739 aa18.91■□□□□ 0.62
SAFB-205ENST00000588852 TSHZ3Q63HK5 1081 aa18.91■□□□□ 0.62
SAFB-205ENST00000588852 TTC22Q5TAA0 569 aa18.9■□□□□ 0.62
SAFB-205ENST00000588852 SLC4A10Q6U841 1118 aa18.9■□□□□ 0.62
SAFB-205ENST00000588852 CHMP4BQ9H444 224 aaKnown RBP18.9■□□□□ 0.62
SAFB-205ENST00000588852 SDSP20132 328 aa18.89■□□□□ 0.61
SAFB-205ENST00000588852 CEP85Q6P2H3 762 aa18.89■□□□□ 0.61
SAFB-205ENST00000588852 G2E3Q7L622 706 aa18.89■□□□□ 0.61
SAFB-205ENST00000588852 MSH6P52701 1360 aa18.89■□□□□ 0.61
SAFB-205ENST00000588852 SLC4A2P04920 1241 aa18.88■□□□□ 0.61
SAFB-205ENST00000588852 LMOD3Q0VAK6 560 aa18.88■□□□□ 0.61
SAFB-205ENST00000588852 CIZ1Q9ULV3 898 aaPredicted RBP18.88■□□□□ 0.61
SAFB-205ENST00000588852 CDK12Q9NYV4 1490 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms