RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, humanhuman

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-223ENST00000557320 ZNF500O60304 480 aaPredicted RBP18.55■□□□□ 0.56
PAPOLA-223ENST00000557320 NUTM2DQ5VT03 806 aaPredicted RBP18.55■□□□□ 0.56
PAPOLA-223ENST00000557320 FAM177BA6PVY3 158 aa18.55■□□□□ 0.56
PAPOLA-223ENST00000557320 BCAR3O75815 825 aa18.55■□□□□ 0.56
PAPOLA-223ENST00000557320 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
PAPOLA-223ENST00000557320 ZNF335Q9H4Z2 1342 aaPredicted RBP18.54■□□□□ 0.56
PAPOLA-223ENST00000557320 PTMSP20962 102 aa18.54■□□□□ 0.56
PAPOLA-223ENST00000557320 ZKSCAN5Q9Y2L8 839 aa18.54■□□□□ 0.56
PAPOLA-223ENST00000557320 LRRC7Q96NW7 1537 aa18.53■□□□□ 0.56
PAPOLA-223ENST00000557320 TRPM1Q7Z4N2 1603 aa18.53■□□□□ 0.56
PAPOLA-223ENST00000557320 KLHL34Q8N239 644 aa18.53■□□□□ 0.56
PAPOLA-223ENST00000557320 TECPR2O15040 1411 aa18.53■□□□□ 0.56
PAPOLA-223ENST00000557320 METP08581 1390 aa18.53■□□□□ 0.56
PAPOLA-223ENST00000557320 PTCH1Q13635 1447 aa18.52■□□□□ 0.56
PAPOLA-223ENST00000557320 ST20-MTHFSA0A0A6YYL1 179 aa18.52■□□□□ 0.56
PAPOLA-223ENST00000557320 KCNA6P17658 529 aa18.52■□□□□ 0.56
PAPOLA-223ENST00000557320 KCNJ4P48050 445 aa18.52■□□□□ 0.56
PAPOLA-223ENST00000557320 KDM2AQ9Y2K7 1162 aa18.52■□□□□ 0.56
PAPOLA-223ENST00000557320 DUSP27Q5VZP5 1158 aa18.52■□□□□ 0.55
PAPOLA-223ENST00000557320 CLUAP1Q96AJ1 413 aa18.52■□□□□ 0.55
PAPOLA-223ENST00000557320 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
PAPOLA-223ENST00000557320 ZFP91Q96JP5 570 aaPredicted RBP18.51■□□□□ 0.55
PAPOLA-223ENST00000557320 C14orf93Q9H972 538 aaKnown RBP18.51■□□□□ 0.55
PAPOLA-223ENST00000557320 NCOA3Q9Y6Q9 1424 aa18.51■□□□□ 0.55
PAPOLA-223ENST00000557320 HS1BP3Q53T59 392 aa18.5■□□□□ 0.55
PAPOLA-223ENST00000557320 AEBP1Q8IUX7 1158 aa18.5■□□□□ 0.55
PAPOLA-223ENST00000557320 CAVIN1Q6NZI2 390 aaKnown RBP18.5■□□□□ 0.55
PAPOLA-223ENST00000557320 PANK1Q8TE04 598 aa18.5■□□□□ 0.55
PAPOLA-223ENST00000557320 DLC1Q96QB1 1528 aa18.5■□□□□ 0.55
PAPOLA-223ENST00000557320 ATP2B3Q16720 1220 aa18.5■□□□□ 0.55
PAPOLA-223ENST00000557320 ADAMTS8Q9UP79 889 aa18.5■□□□□ 0.55
PAPOLA-223ENST00000557320 MPNDQ8N594 471 aa18.49■□□□□ 0.55
PAPOLA-223ENST00000557320 PDZRN3Q9UPQ7 1066 aa18.48■□□□□ 0.55
PAPOLA-223ENST00000557320 CGNL1Q0VF96 1302 aa18.48■□□□□ 0.55
PAPOLA-223ENST00000557320 CERS3Q8IU89 383 aa18.47■□□□□ 0.55
PAPOLA-223ENST00000557320 CCDC39Q9UFE4 941 aa18.47■□□□□ 0.55
PAPOLA-223ENST00000557320 PDCL2Q8N4E4 241 aa18.46■□□□□ 0.55
PAPOLA-223ENST00000557320 KIAA2012Q0VF49 1180 aa18.45■□□□□ 0.54
PAPOLA-223ENST00000557320 IRX3P78415 501 aaPredicted RBP18.45■□□□□ 0.54
PAPOLA-223ENST00000557320 MYRIPQ8NFW9 859 aa18.45■□□□□ 0.54
PAPOLA-223ENST00000557320 ARHGEF28Q8N1W1 1705 aaKnown RBP18.45■□□□□ 0.54
PAPOLA-223ENST00000557320 YTHDC2Q9H6S0 1430 aaKnown RBP18.44■□□□□ 0.54
PAPOLA-223ENST00000557320 ABCC11Q96J66 1382 aa18.44■□□□□ 0.54
PAPOLA-223ENST00000557320 PMFBP1Q8TBY8 1022 aa18.44■□□□□ 0.54
PAPOLA-223ENST00000557320 KIF3AQ9Y496 699 aa18.44■□□□□ 0.54
PAPOLA-223ENST00000557320 RNF214Q8ND24 703 aa18.44■□□□□ 0.54
PAPOLA-223ENST00000557320 NALCNQ8IZF0 1738 aa18.44■□□□□ 0.54
PAPOLA-223ENST00000557320 HMGN5P82970 282 aaKnown RBP18.43■□□□□ 0.54
PAPOLA-223ENST00000557320 MCM5P33992 734 aa18.43■□□□□ 0.54
PAPOLA-223ENST00000557320 CERKQ8TCT0 537 aa18.43■□□□□ 0.54
PAPOLA-223ENST00000557320 RBSNQ9H1K0 784 aa18.43■□□□□ 0.54
PAPOLA-223ENST00000557320 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.43■□□□□ 0.54
PAPOLA-223ENST00000557320 RALGAPBQ86X10 1494 aa18.42■□□□□ 0.54
PAPOLA-223ENST00000557320 FAM135BQ49AJ0 1406 aa18.42■□□□□ 0.54
PAPOLA-223ENST00000557320 MCTP1Q6DN14 999 aa18.42■□□□□ 0.54
PAPOLA-223ENST00000557320 SSFA2P28290 1259 aa18.42■□□□□ 0.54
PAPOLA-223ENST00000557320 EIF3AQ14152 1382 aaKnown RBP18.42■□□□□ 0.54
PAPOLA-223ENST00000557320 KLHL40Q2TBA0 621 aa18.41■□□□□ 0.54
PAPOLA-223ENST00000557320 CIZ1Q9ULV3 898 aaPredicted RBP18.41■□□□□ 0.54
PAPOLA-223ENST00000557320 SIRT1Q96EB6 747 aa18.41■□□□□ 0.54
PAPOLA-223ENST00000557320 AMOTL2Q9Y2J4 779 aa18.41■□□□□ 0.54
PAPOLA-223ENST00000557320 GPRASP1Q5JY77 1395 aa18.41■□□□□ 0.54
PAPOLA-223ENST00000557320 RAB3GAP1Q15042 981 aa18.41■□□□□ 0.54
PAPOLA-223ENST00000557320 CFAP70Q5T0N1 1121 aa18.41■□□□□ 0.54
PAPOLA-223ENST00000557320 U2AF2P26368 475 aaKnown RBP eCLIP18.4■□□□□ 0.546e-12■■□□□ 14.3
PAPOLA-223ENST00000557320 CCDC146Q8IYE0 955 aa18.4■□□□□ 0.54
PAPOLA-223ENST00000557320 ADGRB2O60241 1585 aa18.4■□□□□ 0.54
PAPOLA-223ENST00000557320 NBPF1Q3BBV0 1214 aa18.4■□□□□ 0.54
PAPOLA-223ENST00000557320 ZNF692Q9BU19 519 aaPredicted RBP18.4■□□□□ 0.54
PAPOLA-223ENST00000557320 ROBO2Q9HCK4 1378 aa18.39■□□□□ 0.53
PAPOLA-223ENST00000557320 DCCP43146 1447 aa18.39■□□□□ 0.53
PAPOLA-223ENST00000557320 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.39■□□□□ 0.53
PAPOLA-223ENST00000557320 TMEM94Q12767 1356 aa18.39■□□□□ 0.53
PAPOLA-223ENST00000557320 PRIM1P49642 420 aaKnown RBP18.39■□□□□ 0.53
PAPOLA-223ENST00000557320 IRX5P78411 483 aaPredicted RBP18.39■□□□□ 0.53
PAPOLA-223ENST00000557320 ZNF710Q8N1W2 664 aa18.39■□□□□ 0.53
PAPOLA-223ENST00000557320 RWDD1Q9H446 243 aaPredicted RBP18.38■□□□□ 0.53
PAPOLA-223ENST00000557320 ZSCAN23Q3MJ62 389 aa18.38■□□□□ 0.53
PAPOLA-223ENST00000557320 CDC42BPGQ6DT37 1551 aa18.37■□□□□ 0.53
PAPOLA-223ENST00000557320 ADGRL3Q9HAR2 1447 aa18.37■□□□□ 0.53
PAPOLA-223ENST00000557320 PRIMPOLQ96LW4 560 aa18.37■□□□□ 0.53
PAPOLA-223ENST00000557320 DNAJC2Q99543 621 aaKnown RBP18.37■□□□□ 0.53
PAPOLA-223ENST00000557320 SLFN5Q08AF3 891 aa18.36■□□□□ 0.53
PAPOLA-223ENST00000557320 SECISBP2LQ93073 1101 aaKnown RBP18.36■□□□□ 0.53
PAPOLA-223ENST00000557320 TRERF1Q96PN7 1200 aa18.36■□□□□ 0.53
PAPOLA-223ENST00000557320 PLEKHH1Q9ULM0 1364 aa18.36■□□□□ 0.53
PAPOLA-223ENST00000557320 CCDC66A2RUB6 948 aa18.36■□□□□ 0.53
PAPOLA-223ENST00000557320 SENP3Q9H4L4 574 aaPredicted RBP18.36■□□□□ 0.53
PAPOLA-223ENST00000557320 CHAF1AQ13111 956 aaPredicted RBP18.35■□□□□ 0.53
PAPOLA-223ENST00000557320 BAG4O95429 457 aaKnown RBP18.34■□□□□ 0.53
PAPOLA-223ENST00000557320 PDE3AQ14432 1141 aa18.34■□□□□ 0.53
PAPOLA-223ENST00000557320 SMC5Q8IY18 1101 aa18.34■□□□□ 0.53
PAPOLA-223ENST00000557320 PDLIM2Q96JY6 352 aa18.34■□□□□ 0.53
PAPOLA-223ENST00000557320 BCL2L12Q9HB09 334 aa18.34■□□□□ 0.53
PAPOLA-223ENST00000557320 PCDHB15Q9Y5E8 787 aa18.33■□□□□ 0.53
PAPOLA-223ENST00000557320 TNNT3P45378 269 aaPredicted RBP18.33■□□□□ 0.52
PAPOLA-223ENST00000557320 TMEM132EQ6IEE7 984 aa18.33■□□□□ 0.52
PAPOLA-223ENST00000557320 PROSER2Q86WR7 435 aaPredicted RBP18.33■□□□□ 0.52
PAPOLA-223ENST00000557320 DHX37Q8IY37 1157 aaKnown RBP18.33■□□□□ 0.52
PAPOLA-223ENST00000557320 RBM27Q9P2N5 1060 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms