RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, humanhuman

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-223ENST00000557320 NISCHQ9Y2I1 1504 aa31.02■■■□□ 2.56
PAPOLA-223ENST00000557320 CCDC180Q9P1Z9 1646 aa27.64■■■□□ 2.01
PAPOLA-223ENST00000557320 ABCC9O60706 1549 aa26.49■■□□□ 1.83
PAPOLA-223ENST00000557320 ZCCHC6Q5VYS8 1495 aaKnown RBP25.94■■□□□ 1.74
PAPOLA-223ENST00000557320 MYO15BQ96JP2 1530 aa25.87■■□□□ 1.73
PAPOLA-223ENST00000557320 NACADO15069 1562 aa25.84■■□□□ 1.73
PAPOLA-223ENST00000557320 DCAF1Q9Y4B6 1507 aa25.82■■□□□ 1.72
PAPOLA-223ENST00000557320 RB1CC1Q8TDY2 1594 aa25.77■■□□□ 1.72
PAPOLA-223ENST00000557320 PELP1Q8IZL8 1130 aaKnown RBP25.55■■□□□ 1.68
PAPOLA-223ENST00000557320 DCAF8L2P0C7V8 631 aa25.35■■□□□ 1.65
PAPOLA-223ENST00000557320 UNC13AQ9UPW8 1703 aa25.27■■□□□ 1.64
PAPOLA-223ENST00000557320 HRCP23327 699 aa25.2■■□□□ 1.62
PAPOLA-223ENST00000557320 BICRAQ9NZM4 1560 aa25.02■■□□□ 1.6
PAPOLA-223ENST00000557320 SCRIBQ14160 1630 aa25.01■■□□□ 1.59
PAPOLA-223ENST00000557320 SHROOM4Q9ULL8 1493 aa24.9■■□□□ 1.58
PAPOLA-223ENST00000557320 PPARGC1BQ86YN6 1023 aaKnown RBP24.84■■□□□ 1.57
PAPOLA-223ENST00000557320 MYT1Q01538 1121 aa24.8■■□□□ 1.56
PAPOLA-223ENST00000557320 PABPN1Q86U42 306 aaKnown RBP eCLIP24.67■■□□□ 1.54
PAPOLA-223ENST00000557320 PCGF6Q9BYE7 350 aa24.61■■□□□ 1.53
PAPOLA-223ENST00000557320 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
PAPOLA-223ENST00000557320 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
PAPOLA-223ENST00000557320 CC2D2AQ9P2K1 1620 aa24.11■■□□□ 1.45
PAPOLA-223ENST00000557320 DNAJC5BQ9UF47 199 aa24.06■■□□□ 1.44
PAPOLA-223ENST00000557320 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
PAPOLA-223ENST00000557320 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
PAPOLA-223ENST00000557320 BAZ1AQ9NRL2 1556 aaPredicted RBP24.04■■□□□ 1.44
PAPOLA-223ENST00000557320 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
PAPOLA-223ENST00000557320 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
PAPOLA-223ENST00000557320 SUPT5HO00267 1087 aaKnown RBP23.85■■□□□ 1.41
PAPOLA-223ENST00000557320 SMARCA2P51531 1590 aa23.84■■□□□ 1.41
PAPOLA-223ENST00000557320 ATAD2BQ9ULI0 1458 aa23.8■■□□□ 1.4
PAPOLA-223ENST00000557320 NCAPD3P42695 1498 aa23.79■■□□□ 1.4
PAPOLA-223ENST00000557320 HMGXB3Q12766 1538 aa23.77■■□□□ 1.4
PAPOLA-223ENST00000557320 RSF1Q96T23 1441 aaPredicted RBP23.66■■□□□ 1.38
PAPOLA-223ENST00000557320 WIZO95785 1651 aa23.63■■□□□ 1.37
PAPOLA-223ENST00000557320 BAZ1BQ9UIG0 1483 aaKnown RBP23.58■■□□□ 1.37
PAPOLA-223ENST00000557320 ACIN1Q9UKV3 1341 aaKnown RBP23.51■■□□□ 1.35
PAPOLA-223ENST00000557320 GTF3C3Q9Y5Q9 886 aa23.51■■□□□ 1.35
PAPOLA-223ENST00000557320 ZEB1P37275 1124 aaPredicted RBP23.48■■□□□ 1.35
PAPOLA-223ENST00000557320 TOP2AP11388 1531 aaKnown RBP23.46■■□□□ 1.35
PAPOLA-223ENST00000557320 NEUROD1Q13562 356 aa23.43■■□□□ 1.34
PAPOLA-223ENST00000557320 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
PAPOLA-223ENST00000557320 TTBK1Q5TCY1 1321 aaPredicted RBP23.35■■□□□ 1.33
PAPOLA-223ENST00000557320 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
PAPOLA-223ENST00000557320 CENPBP07199 599 aaPredicted RBP23.32■■□□□ 1.32
PAPOLA-223ENST00000557320 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
PAPOLA-223ENST00000557320 BCL11AQ9H165 835 aa23.15■■□□□ 1.3
PAPOLA-223ENST00000557320 LOC105371045A0A1W2PR82 267 aa23.11■■□□□ 1.29
PAPOLA-223ENST00000557320 CCDC88BA6NC98 1476 aa23.08■■□□□ 1.29
PAPOLA-223ENST00000557320 PRDM2Q13029 1718 aa23.03■■□□□ 1.28
PAPOLA-223ENST00000557320 NESP48681 1621 aa23.03■■□□□ 1.28
PAPOLA-223ENST00000557320 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
PAPOLA-223ENST00000557320 CFTRP13569 1480 aa23.01■■□□□ 1.27
PAPOLA-223ENST00000557320 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
PAPOLA-223ENST00000557320 FAM9AQ8IZU1 332 aaPredicted RBP22.89■■□□□ 1.26
PAPOLA-223ENST00000557320 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
PAPOLA-223ENST00000557320 YTHDC1Q96MU7 727 aaKnown RBP22.83■■□□□ 1.25
PAPOLA-223ENST00000557320 THOC2Q8NI27 1593 aaKnown RBP22.82■■□□□ 1.24
PAPOLA-223ENST00000557320 DIEXFQ68CQ4 756 aaKnown RBP22.82■■□□□ 1.24
PAPOLA-223ENST00000557320 ERCC6Q03468 1493 aa22.81■■□□□ 1.24
PAPOLA-223ENST00000557320 FANCD2Q9BXW9 1451 aa22.77■■□□□ 1.24
PAPOLA-223ENST00000557320 CEP164Q9UPV0 1460 aa22.74■■□□□ 1.23
PAPOLA-223ENST00000557320 PRKCSHP14314 528 aaPredicted RBP22.73■■□□□ 1.23
PAPOLA-223ENST00000557320 MRC2Q9UBG0 1479 aa22.69■■□□□ 1.22
PAPOLA-223ENST00000557320 WDR62O43379 1518 aa22.69■■□□□ 1.22
PAPOLA-223ENST00000557320 CUX2O14529 1486 aa22.67■■□□□ 1.22
PAPOLA-223ENST00000557320 ANP32EQ9BTT0 268 aa22.62■■□□□ 1.21
PAPOLA-223ENST00000557320 CCER1Q8TC90 406 aaPredicted RBP22.58■■□□□ 1.21
PAPOLA-223ENST00000557320 URB2Q14146 1524 aaKnown RBP22.57■■□□□ 1.2
PAPOLA-223ENST00000557320 ABCC8Q09428 1581 aa22.52■■□□□ 1.2
PAPOLA-223ENST00000557320 DNMBPQ6XZF7 1577 aa22.52■■□□□ 1.2
PAPOLA-223ENST00000557320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.51■■□□□ 1.19
PAPOLA-223ENST00000557320 TOPBP1Q92547 1522 aa22.47■■□□□ 1.19
PAPOLA-223ENST00000557320 CSRNP3Q8WYN3 585 aa22.44■■□□□ 1.18
PAPOLA-223ENST00000557320 CUX1P39880 1505 aa22.4■■□□□ 1.18
PAPOLA-223ENST00000557320 BIVM-ERCC5R4GMW8 1640 aa22.37■■□□□ 1.17
PAPOLA-223ENST00000557320 ERICH6Q7L0X2 663 aa22.33■■□□□ 1.17
PAPOLA-223ENST00000557320 EHMT2Q96KQ7 1210 aa22.33■■□□□ 1.17
PAPOLA-223ENST00000557320 TOP2BQ02880 1626 aa22.32■■□□□ 1.16
PAPOLA-223ENST00000557320 TARBP1Q13395 1621 aaKnown RBP22.29■■□□□ 1.16
PAPOLA-223ENST00000557320 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
PAPOLA-223ENST00000557320 POLA1P09884 1462 aaPredicted RBP22.28■■□□□ 1.16
PAPOLA-223ENST00000557320 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
PAPOLA-223ENST00000557320 WRNQ14191 1432 aaPredicted RBP eCLIP22.27■■□□□ 1.16
PAPOLA-223ENST00000557320 FGD5Q6ZNL6 1462 aa22.24■■□□□ 1.15
PAPOLA-223ENST00000557320 WDR97A6NE52 1622 aa22.24■■□□□ 1.15
PAPOLA-223ENST00000557320 TSHZ2Q9NRE2 1034 aa22.13■■□□□ 1.13
PAPOLA-223ENST00000557320 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
PAPOLA-223ENST00000557320 SOGA1O94964 1423 aa22.11■■□□□ 1.13
PAPOLA-223ENST00000557320 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
PAPOLA-223ENST00000557320 RAD54L2Q9Y4B4 1467 aa22.1■■□□□ 1.13
PAPOLA-223ENST00000557320 ZNF316A6NFI3 1004 aaPredicted RBP22.1■■□□□ 1.13
PAPOLA-223ENST00000557320 MIER1Q8N108 512 aa22.1■■□□□ 1.13
PAPOLA-223ENST00000557320 ZNF608Q9ULD9 1512 aaPredicted RBP22.09■■□□□ 1.13
PAPOLA-223ENST00000557320 ABCA5Q8WWZ7 1642 aa22.06■■□□□ 1.12
PAPOLA-223ENST00000557320 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
PAPOLA-223ENST00000557320 SUPT16HQ9Y5B9 1047 aaKnown RBP22.03■■□□□ 1.12
PAPOLA-223ENST00000557320 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
PAPOLA-223ENST00000557320 AQRO60306 1485 aaKnown RBP eCLIP21.94■■□□□ 1.12e-10■■■■□ 19.7
PAPOLA-223ENST00000557320 GAPVD1Q14C86 1478 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms