RNA–Protein interactions for RNA: ENST00000552728.5

WDR90-223, Transcript of WD repeat domain 90, human

TSL 5

Gene WDR90, Length 3,133 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR90-223	ENST00000552728	CHAMP1	Q96JM3	812 aa		18.84	■□□□□ 0.61
WDR90-223	ENST00000552728	SMARCA5	O60264	1052 aa	Predicted RBP	18.83	■□□□□ 0.6
WDR90-223	ENST00000552728	GSPT1	P15170	499 aa	Known RBP	18.83	■□□□□ 0.6
WDR90-223	ENST00000552728	FOXD4L5	Q5VV16	416 aa	Predicted RBP	18.83	■□□□□ 0.6
WDR90-223	ENST00000552728	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	18.83	■□□□□ 0.6
WDR90-223	ENST00000552728	LMTK2	Q8IWU2	1503 aa		18.83	■□□□□ 0.6
WDR90-223	ENST00000552728	PUS7	Q96PZ0	661 aa	Known RBP	18.83	■□□□□ 0.6
WDR90-223	ENST00000552728	FRMPD1	Q5SYB0	1578 aa		18.82	■□□□□ 0.6
WDR90-223	ENST00000552728	DDX49	Q9Y6V7	483 aa	Known RBP	18.82	■□□□□ 0.6
WDR90-223	ENST00000552728	ABCC3	O15438	1527 aa		18.82	■□□□□ 0.6
WDR90-223	ENST00000552728	ARHGEF28	Q8N1W1	1705 aa	Known RBP	18.82	■□□□□ 0.6
WDR90-223	ENST00000552728	NCBP3	Q53F19	620 aa	Known RBP	18.82	■□□□□ 0.6
WDR90-223	ENST00000552728	SOX12	O15370	315 aa		18.81	■□□□□ 0.6
WDR90-223	ENST00000552728	PKP1	Q13835	747 aa		18.81	■□□□□ 0.6
WDR90-223	ENST00000552728	GCC1	Q96CN9	775 aa		18.81	■□□□□ 0.6
WDR90-223	ENST00000552728	USP32	Q8NFA0	1604 aa		18.8	■□□□□ 0.6
WDR90-223	ENST00000552728	POGZ	Q7Z3K3	1410 aa		18.8	■□□□□ 0.6
WDR90-223	ENST00000552728	NCOA3	Q9Y6Q9	1424 aa		18.8	■□□□□ 0.6
WDR90-223	ENST00000552728	MCTP1	Q6DN14	999 aa		18.8	■□□□□ 0.6
WDR90-223	ENST00000552728	CD163L1	Q9NR16	1453 aa		18.79	■□□□□ 0.6
WDR90-223	ENST00000552728	CDC45	O75419	566 aa		18.79	■□□□□ 0.6
WDR90-223	ENST00000552728	NEXMIF	Q5QGS0	1516 aa		18.79	■□□□□ 0.6
WDR90-223	ENST00000552728	LRRC7	Q96NW7	1537 aa		18.79	■□□□□ 0.6
WDR90-223	ENST00000552728	GNAI1	P63096	354 aa		18.78	■□□□□ 0.6
WDR90-223	ENST00000552728	AK9	Q5TCS8	1911 aa		18.78	■□□□□ 0.6
WDR90-223	ENST00000552728	FAM69C	Q0P6D2	419 aa		18.78	■□□□□ 0.6
WDR90-223	ENST00000552728	NUTM2F	A1L443	756 aa		18.78	■□□□□ 0.6
WDR90-223	ENST00000552728	PLEKHM2	Q8IWE5	1019 aa		18.78	■□□□□ 0.6
WDR90-223	ENST00000552728	CIZ1	Q9ULV3	898 aa	Predicted RBP	18.78	■□□□□ 0.6
WDR90-223	ENST00000552728	SIGLEC1	Q9BZZ2	1709 aa		18.78	■□□□□ 0.6
WDR90-223	ENST00000552728	YTHDC2	Q9H6S0	1430 aa	Known RBP	18.77	■□□□□ 0.6
WDR90-223	ENST00000552728	BAG4	O95429	457 aa	Known RBP	18.77	■□□□□ 0.6
WDR90-223	ENST00000552728	AEBP1	Q8IUX7	1158 aa		18.76	■□□□□ 0.59
WDR90-223	ENST00000552728	CAVIN1	Q6NZI2	390 aa	Known RBP	18.76	■□□□□ 0.59
WDR90-223	ENST00000552728	MLEC	Q14165	292 aa		18.75	■□□□□ 0.59
WDR90-223	ENST00000552728	PNPLA6	Q8IY17	1366 aa		18.75	■□□□□ 0.59
WDR90-223	ENST00000552728	GOLGA6L22	H0YM25	854 aa		18.75	■□□□□ 0.59
WDR90-223	ENST00000552728	NASP	P49321	788 aa	Predicted RBP	18.75	■□□□□ 0.59
WDR90-223	ENST00000552728	ZGPAT	Q8N5A5	531 aa	Known RBP	18.75	■□□□□ 0.59
WDR90-223	ENST00000552728	SLC52A1	Q9NWF4	448 aa		18.74	■□□□□ 0.59
WDR90-223	ENST00000552728	MIS18A	Q9NYP9	233 aa		18.74	■□□□□ 0.59
WDR90-223	ENST00000552728	PTPRM	P28827	1452 aa		18.74	■□□□□ 0.59
WDR90-223	ENST00000552728	TSHZ3	Q63HK5	1081 aa		18.74	■□□□□ 0.59
WDR90-223	ENST00000552728	NOL8	Q76FK4	1167 aa	Known RBP	18.74	■□□□□ 0.59
WDR90-223	ENST00000552728	IFT57	Q9NWB7	429 aa		18.74	■□□□□ 0.59
WDR90-223	ENST00000552728	FAM135B	Q49AJ0	1406 aa		18.74	■□□□□ 0.59
WDR90-223	ENST00000552728	MCM10	Q7L590	875 aa		18.74	■□□□□ 0.59
WDR90-223	ENST00000552728	ABCC4	O15439	1325 aa		18.74	■□□□□ 0.59
WDR90-223	ENST00000552728	IL13	P35225	146 aa		18.73	■□□□□ 0.59
WDR90-223	ENST00000552728	RBM27	Q9P2N5	1060 aa	Known RBP	18.73	■□□□□ 0.59
WDR90-223	ENST00000552728	HECW2	Q9P2P5	1572 aa		18.72	■□□□□ 0.59
WDR90-223	ENST00000552728	SKOR2	Q2VWA4	1001 aa	Predicted RBP	18.72	■□□□□ 0.59
WDR90-223	ENST00000552728	TPRN	Q4KMQ1	711 aa		18.72	■□□□□ 0.59
WDR90-223	ENST00000552728	API5	Q9BZZ5	524 aa	Known RBP	18.72	■□□□□ 0.59
WDR90-223	ENST00000552728	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	18.72	■□□□□ 0.59
WDR90-223	ENST00000552728	FOXD4L3	Q6VB84	417 aa	Predicted RBP	18.72	■□□□□ 0.59
WDR90-223	ENST00000552728	TXNDC2	Q86VQ3	553 aa		18.72	■□□□□ 0.59
WDR90-223	ENST00000552728	SLC4A10	Q6U841	1118 aa		18.71	■□□□□ 0.59
WDR90-223	ENST00000552728	MLH3	Q9UHC1	1453 aa		18.71	■□□□□ 0.59
WDR90-223	ENST00000552728	YEATS2	Q9ULM3	1422 aa		18.71	■□□□□ 0.59
WDR90-223	ENST00000552728	HSP90AA2P	Q14568	343 aa	Predicted RBP	18.71	■□□□□ 0.59
WDR90-223	ENST00000552728	TTC22	Q5TAA0	569 aa		18.71	■□□□□ 0.59
WDR90-223	ENST00000552728	ARHGAP45	Q92619	1136 aa		18.71	■□□□□ 0.59
WDR90-223	ENST00000552728	CFAP44	Q96MT7	982 aa		18.71	■□□□□ 0.59
WDR90-223	ENST00000552728	MEIS3	Q99687	375 aa		18.71	■□□□□ 0.59
WDR90-223	ENST00000552728	SDS	P20132	328 aa		18.7	■□□□□ 0.58
WDR90-223	ENST00000552728	CALD1	Q05682	793 aa	Known RBP	18.7	■□□□□ 0.58
WDR90-223	ENST00000552728	PKNOX2	Q96KN3	472 aa		18.7	■□□□□ 0.58
WDR90-223	ENST00000552728	MED14	O60244	1454 aa		18.7	■□□□□ 0.58
WDR90-223	ENST00000552728	PRPF40A	O75400	957 aa	Known RBP	18.69	■□□□□ 0.58
WDR90-223	ENST00000552728	ZNF853	P0CG23	659 aa		18.69	■□□□□ 0.58
WDR90-223	ENST00000552728	CHMP4B	Q9H444	224 aa	Known RBP	18.69	■□□□□ 0.58
WDR90-223	ENST00000552728	CFAP74	Q9C0B2	1584 aa		18.69	■□□□□ 0.58
WDR90-223	ENST00000552728	ZBTB7C	A1YPR0	619 aa		18.69	■□□□□ 0.58
WDR90-223	ENST00000552728	SULT6B1	Q6IMI4	303 aa		18.69	■□□□□ 0.58
WDR90-223	ENST00000552728	ZNF428	Q96B54	188 aa		18.69	■□□□□ 0.58
WDR90-223	ENST00000552728	USP26	Q9BXU7	913 aa		18.69	■□□□□ 0.58
WDR90-223	ENST00000552728	DCTPP1	Q9H773	170 aa		18.69	■□□□□ 0.58
WDR90-223	ENST00000552728	PIK3C2B	O00750	1634 aa		18.69	■□□□□ 0.58
WDR90-223	ENST00000552728	PTCH1	Q13635	1447 aa		18.68	■□□□□ 0.58
WDR90-223	ENST00000552728		F6X3S4	739 aa		18.68	■□□□□ 0.58
WDR90-223	ENST00000552728	BRPF1	P55201	1214 aa	Predicted RBP	18.67	■□□□□ 0.58
WDR90-223	ENST00000552728	RABEP1	Q15276	862 aa		18.67	■□□□□ 0.58
WDR90-223	ENST00000552728	COG3	Q96JB2	828 aa		18.67	■□□□□ 0.58
WDR90-223	ENST00000552728	ANP32B	Q92688	251 aa	Known RBP	18.67	■□□□□ 0.58
WDR90-223	ENST00000552728	MYO5B	Q9ULV0	1848 aa		18.67	■□□□□ 0.58
WDR90-223	ENST00000552728	KLHL40	Q2TBA0	621 aa		18.66	■□□□□ 0.58
WDR90-223	ENST00000552728	ZFYVE9	O95405	1425 aa		18.66	■□□□□ 0.58
WDR90-223	ENST00000552728	VSIG10	Q8N0Z9	540 aa		18.66	■□□□□ 0.58
WDR90-223	ENST00000552728	NECTIN2	Q92692	538 aa		18.66	■□□□□ 0.58
WDR90-223	ENST00000552728	ISY1	Q9ULR0	285 aa	Known RBP	18.65	■□□□□ 0.58
WDR90-223	ENST00000552728	INTS3	Q68E01	1043 aa	Known RBP	18.65	■□□□□ 0.58
WDR90-223	ENST00000552728	CEP85	Q6P2H3	762 aa		18.65	■□□□□ 0.58
WDR90-223	ENST00000552728	ZSCAN23	Q3MJ62	389 aa		18.64	■□□□□ 0.57
WDR90-223	ENST00000552728	PIK3R4	Q99570	1358 aa		18.64	■□□□□ 0.57
WDR90-223	ENST00000552728	ANKRD44	Q8N8A2	993 aa		18.64	■□□□□ 0.57
WDR90-223	ENST00000552728	RBSN	Q9H1K0	784 aa		18.64	■□□□□ 0.57
WDR90-223	ENST00000552728	LMBRD1	Q9NUN5	540 aa		18.64	■□□□□ 0.57
WDR90-223	ENST00000552728	MSH6	P52701	1360 aa		18.64	■□□□□ 0.57
WDR90-223	ENST00000552728	RIMS2	Q9UQ26	1411 aa		18.64	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 347.8 ms