RNA–Protein interactions for RNA: ENST00000549993.1

AC138331.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC138331.1, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138331.1-201ENST00000549993 NLRP13Q86W25 1043 aa13.99□□□□□ -0.17
AC138331.1-201ENST00000549993 CCDC61Q9Y6R9 512 aa13.99□□□□□ -0.17
AC138331.1-201ENST00000549993 LMO7Q8WWI1 1683 aa13.98□□□□□ -0.17
AC138331.1-201ENST00000549993 ADGRB1O14514 1584 aa13.98□□□□□ -0.17
AC138331.1-201ENST00000549993 PARP4Q9UKK3 1724 aaKnown RBP13.98□□□□□ -0.17
AC138331.1-201ENST00000549993 TOM1L2Q6ZVM7 507 aa13.97□□□□□ -0.17
AC138331.1-201ENST00000549993 CDK19Q9BWU1 502 aa13.97□□□□□ -0.17
AC138331.1-201ENST00000549993 CHD4Q14839 1912 aa13.97□□□□□ -0.17
AC138331.1-201ENST00000549993 GRIN3BO60391 1043 aa13.96□□□□□ -0.17
AC138331.1-201ENST00000549993 SLC16A10Q8TF71 515 aa13.96□□□□□ -0.17
AC138331.1-201ENST00000549993 PHRF1Q9P1Y6 1649 aaKnown RBP13.96□□□□□ -0.17
AC138331.1-201ENST00000549993 EXOC5O00471 708 aa13.94□□□□□ -0.18
AC138331.1-201ENST00000549993 ZNF827Q17R98 1081 aa13.94□□□□□ -0.18
AC138331.1-201ENST00000549993 PELP1Q8IZL8 1130 aaKnown RBP13.94□□□□□ -0.18
AC138331.1-201ENST00000549993 AXIN2Q9Y2T1 843 aa13.94□□□□□ -0.18
AC138331.1-201ENST00000549993 WDR17Q8IZU2 1322 aa13.93□□□□□ -0.18
AC138331.1-201ENST00000549993 SHANK3Q9BYB0 1731 aa13.93□□□□□ -0.18
AC138331.1-201ENST00000549993 YBX3P16989 372 aaKnown RBP eCLIP13.93□□□□□ -0.18
AC138331.1-201ENST00000549993 POLD1P28340 1107 aa13.93□□□□□ -0.18
AC138331.1-201ENST00000549993 NLGN2Q8NFZ4 835 aa13.93□□□□□ -0.18
AC138331.1-201ENST00000549993 CARD10Q9BWT7 1032 aa13.93□□□□□ -0.18
AC138331.1-201ENST00000549993 AKT1S1Q96B36 256 aa13.92□□□□□ -0.18
AC138331.1-201ENST00000549993 LRRC4BQ9NT99 713 aa13.92□□□□□ -0.18
AC138331.1-201ENST00000549993 ATP10DQ9P241 1426 aa13.91□□□□□ -0.18
AC138331.1-201ENST00000549993 GPBP1L1Q9HC44 474 aaPredicted RBP13.91□□□□□ -0.18
AC138331.1-201ENST00000549993 KLHL34Q8N239 644 aa13.9□□□□□ -0.18
AC138331.1-201ENST00000549993 BRD4O60885 1362 aaPredicted RBP13.9□□□□□ -0.18
AC138331.1-201ENST00000549993 LRRC37A3O60309 1634 aa13.9□□□□□ -0.19
AC138331.1-201ENST00000549993 ZBTB7CA1YPR0 619 aa13.89□□□□□ -0.19
AC138331.1-201ENST00000549993 NLRP6P59044 892 aa13.89□□□□□ -0.19
AC138331.1-201ENST00000549993 SBF2Q86WG5 1849 aa13.88□□□□□ -0.19
AC138331.1-201ENST00000549993 ARHGEF25Q86VW2 580 aa13.88□□□□□ -0.19
AC138331.1-201ENST00000549993 DNAJC5GQ8N7S2 189 aa13.88□□□□□ -0.19
AC138331.1-201ENST00000549993 STAC3Q96MF2 364 aa13.88□□□□□ -0.19
AC138331.1-201ENST00000549993 ACSBG1Q96GR2 724 aa13.87□□□□□ -0.19
AC138331.1-201ENST00000549993 PNPLA7Q6ZV29 1317 aa13.87□□□□□ -0.19
AC138331.1-201ENST00000549993 KDM2AQ9Y2K7 1162 aa13.86□□□□□ -0.19
AC138331.1-201ENST00000549993 ADCY9O60503 1353 aa13.85□□□□□ -0.19
AC138331.1-201ENST00000549993 USP6P35125 1406 aa13.85□□□□□ -0.19
AC138331.1-201ENST00000549993 SLC27A3Q5K4L6 730 aa13.85□□□□□ -0.19
AC138331.1-201ENST00000549993 PAPPAQ13219 1627 aa13.84□□□□□ -0.19
AC138331.1-201ENST00000549993 APLP1P51693 650 aa13.84□□□□□ -0.19
AC138331.1-201ENST00000549993 DCAF11Q8TEB1 546 aa13.84□□□□□ -0.19
AC138331.1-201ENST00000549993 PCNTO95613 3336 aa13.84□□□□□ -0.19
AC138331.1-201ENST00000549993 CCDC7Q96M83 1385 aa13.83□□□□□ -0.19
AC138331.1-201ENST00000549993 CSB-PGBD3P0DP91 1061 aa13.83□□□□□ -0.2
AC138331.1-201ENST00000549993 TFCP2L1Q9NZI6 479 aa13.83□□□□□ -0.2
AC138331.1-201ENST00000549993 TNS2Q63HR2 1409 aa13.82□□□□□ -0.2
AC138331.1-201ENST00000549993 SLIT3O75094 1523 aa13.82□□□□□ -0.2
AC138331.1-201ENST00000549993 KIF3CO14782 793 aa13.82□□□□□ -0.2
AC138331.1-201ENST00000549993 KCNH5Q8NCM2 988 aa13.81□□□□□ -0.2
AC138331.1-201ENST00000549993 ZNF526Q8TF50 670 aaPredicted RBP13.81□□□□□ -0.2
AC138331.1-201ENST00000549993 CPSF1Q10570 1443 aaKnown RBP13.81□□□□□ -0.2
AC138331.1-201ENST00000549993 PPIP5K1Q6PFW1 1433 aa13.81□□□□□ -0.2
AC138331.1-201ENST00000549993 COL13A1Q5TAT6 717 aaPredicted RBP13.8□□□□□ -0.2
AC138331.1-201ENST00000549993 CABP1Q9NZU7 370 aa13.8□□□□□ -0.2
AC138331.1-201ENST00000549993 CD2APQ9Y5K6 639 aa13.8□□□□□ -0.2
AC138331.1-201ENST00000549993 ITSN1Q15811 1721 aa13.8□□□□□ -0.2
AC138331.1-201ENST00000549993 SRPK2P78362 688 aaKnown RBP13.79□□□□□ -0.2
AC138331.1-201ENST00000549993 CABP2Q9NPB3 220 aa13.79□□□□□ -0.2
AC138331.1-201ENST00000549993 COL18A1P39060 1754 aa13.78□□□□□ -0.2
AC138331.1-201ENST00000549993 PRELPP51888 382 aa13.77□□□□□ -0.21
AC138331.1-201ENST00000549993 TOPAZ1Q8N9V7 1692 aa13.77□□□□□ -0.21
AC138331.1-201ENST00000549993 IL2RBP14784 551 aa13.76□□□□□ -0.21
AC138331.1-201ENST00000549993 KCNQ4P56696 695 aa13.76□□□□□ -0.21
AC138331.1-201ENST00000549993 COL23A1Q86Y22 540 aaPredicted RBP13.76□□□□□ -0.21
AC138331.1-201ENST00000549993 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
AC138331.1-201ENST00000549993 JMYQ8N9B5 988 aa13.75□□□□□ -0.21
AC138331.1-201ENST00000549993 COL24A1Q17RW2 1714 aa13.75□□□□□ -0.21
AC138331.1-201ENST00000549993 NHSQ6T4R5 1651 aa13.75□□□□□ -0.21
AC138331.1-201ENST00000549993 TTC21BQ7Z4L5 1316 aa13.74□□□□□ -0.21
AC138331.1-201ENST00000549993 TOMM70O94826 608 aa13.74□□□□□ -0.21
AC138331.1-201ENST00000549993 NLRP2Q9NX02 1062 aa13.74□□□□□ -0.21
AC138331.1-201ENST00000549993 ABCC6O95255 1503 aa13.74□□□□□ -0.21
AC138331.1-201ENST00000549993 CAPN15O75808 1086 aa13.73□□□□□ -0.21
AC138331.1-201ENST00000549993 ZNF692Q9BU19 519 aaPredicted RBP13.73□□□□□ -0.21
AC138331.1-201ENST00000549993 TRPM1Q7Z4N2 1603 aa13.72□□□□□ -0.21
AC138331.1-201ENST00000549993 ERBB3P21860 1342 aa13.72□□□□□ -0.21
AC138331.1-201ENST00000549993 SOX12O15370 315 aa13.72□□□□□ -0.21
AC138331.1-201ENST00000549993 MSH5O43196 834 aa13.71□□□□□ -0.21
AC138331.1-201ENST00000549993 PRIM1P49642 420 aaKnown RBP13.71□□□□□ -0.21
AC138331.1-201ENST00000549993 MSL1Q68DK7 614 aa13.71□□□□□ -0.21
AC138331.1-201ENST00000549993 TNS4Q8IZW8 715 aa13.71□□□□□ -0.21
AC138331.1-201ENST00000549993 KLRG1Q96E93 195 aa13.71□□□□□ -0.21
AC138331.1-201ENST00000549993 AKAP12Q02952 1782 aa13.71□□□□□ -0.22
AC138331.1-201ENST00000549993 TTC21AQ8NDW8 1320 aa13.7□□□□□ -0.22
AC138331.1-201ENST00000549993 CENPJQ9HC77 1338 aaPredicted RBP13.7□□□□□ -0.22
AC138331.1-201ENST00000549993 NBPF1Q3BBV0 1214 aa13.7□□□□□ -0.22
AC138331.1-201ENST00000549993 DDX54Q8TDD1 881 aaKnown RBP13.69□□□□□ -0.22
AC138331.1-201ENST00000549993 CCNL1Q9UK58 526 aaPredicted RBP13.69□□□□□ -0.22
AC138331.1-201ENST00000549993 WNK3Q9BYP7 1800 aa13.69□□□□□ -0.22
AC138331.1-201ENST00000549993 FLAD1Q8NFF5 587 aa13.67□□□□□ -0.22
AC138331.1-201ENST00000549993 ANKRD24Q8TF21 1146 aa13.67□□□□□ -0.22
AC138331.1-201ENST00000549993 SYTL4Q96C24 671 aaPredicted RBP13.67□□□□□ -0.22
AC138331.1-201ENST00000549993 NFAT5O94916 1531 aa13.67□□□□□ -0.22
AC138331.1-201ENST00000549993 NSD2O96028 1365 aa13.67□□□□□ -0.22
AC138331.1-201ENST00000549993 ANKRD36BQ8N2N9 1353 aa13.67□□□□□ -0.22
AC138331.1-201ENST00000549993 QSER1Q2KHR3 1735 aa13.67□□□□□ -0.22
AC138331.1-201ENST00000549993 IGSF1Q8N6C5 1336 aa13.66□□□□□ -0.22
AC138331.1-201ENST00000549993 SLC34A2O95436 690 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms