RNA–Protein interactions for RNA: ENST00000549993.1

AC138331.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC138331.1, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138331.1-201ENST00000549993 NISCHQ9Y2I1 1504 aa24.36■■□□□ 1.49
AC138331.1-201ENST00000549993 ABCC9O60706 1549 aa22.77■■□□□ 1.24
AC138331.1-201ENST00000549993 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
AC138331.1-201ENST00000549993 CCDC180Q9P1Z9 1646 aa21.97■■□□□ 1.11
AC138331.1-201ENST00000549993 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
AC138331.1-201ENST00000549993 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
AC138331.1-201ENST00000549993 NACADO15069 1562 aa21.06■□□□□ 0.96
AC138331.1-201ENST00000549993 DCAF8L2P0C7V8 631 aa20.9■□□□□ 0.94
AC138331.1-201ENST00000549993 DNAJC5Q9H3Z4 198 aa20.79■□□□□ 0.92
AC138331.1-201ENST00000549993 BICRAQ9NZM4 1560 aa20.76■□□□□ 0.91
AC138331.1-201ENST00000549993 MYO15BQ96JP2 1530 aa20.63■□□□□ 0.89
AC138331.1-201ENST00000549993 UNC13AQ9UPW8 1703 aa20.62■□□□□ 0.89
AC138331.1-201ENST00000549993 CECR2Q9BXF3 1484 aa20.61■□□□□ 0.89
AC138331.1-201ENST00000549993 CC2D2AQ9P2K1 1620 aa20.46■□□□□ 0.87
AC138331.1-201ENST00000549993 SHROOM4Q9ULL8 1493 aa20.45■□□□□ 0.86
AC138331.1-201ENST00000549993 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
AC138331.1-201ENST00000549993 DCAF1Q9Y4B6 1507 aa20.1■□□□□ 0.81
AC138331.1-201ENST00000549993 ZCCHC6Q5VYS8 1495 aaKnown RBP20.03■□□□□ 0.8
AC138331.1-201ENST00000549993 SCRIBQ14160 1630 aa20.02■□□□□ 0.79
AC138331.1-201ENST00000549993 CUX2O14529 1486 aa19.91■□□□□ 0.78
AC138331.1-201ENST00000549993 ERCC6Q03468 1493 aa19.68■□□□□ 0.74
AC138331.1-201ENST00000549993 NCAPD3P42695 1498 aa19.56■□□□□ 0.72
AC138331.1-201ENST00000549993 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
AC138331.1-201ENST00000549993 NESP48681 1621 aa19.36■□□□□ 0.69
AC138331.1-201ENST00000549993 ATAD2BQ9ULI0 1458 aa19.36■□□□□ 0.69
AC138331.1-201ENST00000549993 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
AC138331.1-201ENST00000549993 THOC2Q8NI27 1593 aaKnown RBP19.21■□□□□ 0.67
AC138331.1-201ENST00000549993 SMARCA2P51531 1590 aa19.19■□□□□ 0.66
AC138331.1-201ENST00000549993 PDS5BQ9NTI5 1447 aa19.1■□□□□ 0.65
AC138331.1-201ENST00000549993 LAMC3Q9Y6N6 1575 aa19.08■□□□□ 0.65
AC138331.1-201ENST00000549993 BAZ1BQ9UIG0 1483 aaKnown RBP19.08■□□□□ 0.64
AC138331.1-201ENST00000549993 SMARCA4P51532 1647 aa19.04■□□□□ 0.64
AC138331.1-201ENST00000549993 OSCARQ8IYS5 282 aa19■□□□□ 0.63
AC138331.1-201ENST00000549993 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
AC138331.1-201ENST00000549993 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
AC138331.1-201ENST00000549993 MRC2Q9UBG0 1479 aa18.92■□□□□ 0.62
AC138331.1-201ENST00000549993 BAZ1AQ9NRL2 1556 aaPredicted RBP18.91■□□□□ 0.62
AC138331.1-201ENST00000549993 KIF21AQ7Z4S6 1674 aa18.91■□□□□ 0.62
AC138331.1-201ENST00000549993 WDR62O43379 1518 aa18.86■□□□□ 0.61
AC138331.1-201ENST00000549993 MROH2BQ7Z745 1585 aa18.75■□□□□ 0.59
AC138331.1-201ENST00000549993 CEP164Q9UPV0 1460 aa18.69■□□□□ 0.58
AC138331.1-201ENST00000549993 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
AC138331.1-201ENST00000549993 RIMBP3CA6NJZ7 1639 aa18.61■□□□□ 0.57
AC138331.1-201ENST00000549993 RIMBP3BA6NNM3 1639 aa18.61■□□□□ 0.57
AC138331.1-201ENST00000549993 RIMBP3Q9UFD9 1639 aa18.61■□□□□ 0.57
AC138331.1-201ENST00000549993 CYB5RLQ6IPT4 315 aa18.57■□□□□ 0.56
AC138331.1-201ENST00000549993 ARHGEF11O15085 1522 aa18.56■□□□□ 0.56
AC138331.1-201ENST00000549993 CFTRP13569 1480 aa18.55■□□□□ 0.56
AC138331.1-201ENST00000549993 TRHP20396 242 aaPredicted RBP18.54■□□□□ 0.56
AC138331.1-201ENST00000549993 URB2Q14146 1524 aaKnown RBP18.53■□□□□ 0.56
AC138331.1-201ENST00000549993 AEBP2Q6ZN18 517 aaPredicted RBP18.47■□□□□ 0.55
AC138331.1-201ENST00000549993 ZNF608Q9ULD9 1512 aaPredicted RBP18.42■□□□□ 0.54
AC138331.1-201ENST00000549993 IFT140Q96RY7 1462 aa18.39■□□□□ 0.53
AC138331.1-201ENST00000549993 WIZO95785 1651 aa18.38■□□□□ 0.53
AC138331.1-201ENST00000549993 ARAP1Q96P48 1450 aa18.36■□□□□ 0.53
AC138331.1-201ENST00000549993 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
AC138331.1-201ENST00000549993 FBLN2P98095 1184 aa18.21■□□□□ 0.51
AC138331.1-201ENST00000549993 AQRO60306 1485 aaKnown RBP eCLIP18.2■□□□□ 0.5
AC138331.1-201ENST00000549993 TOPBP1Q92547 1522 aa18.2■□□□□ 0.5
AC138331.1-201ENST00000549993 TOP2AP11388 1531 aaKnown RBP18.17■□□□□ 0.5
AC138331.1-201ENST00000549993 EIF4G3O43432 1585 aaKnown RBP18.15■□□□□ 0.5
AC138331.1-201ENST00000549993 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
AC138331.1-201ENST00000549993 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
AC138331.1-201ENST00000549993 CHD1O14646 1710 aa18.04■□□□□ 0.48
AC138331.1-201ENST00000549993 TARBP1Q13395 1621 aaKnown RBP18.04■□□□□ 0.48
AC138331.1-201ENST00000549993 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
AC138331.1-201ENST00000549993 CHMP7Q8WUX9 453 aaPredicted RBP18.01■□□□□ 0.47
AC138331.1-201ENST00000549993 TDRD9Q8NDG6 1382 aaKnown RBP18.01■□□□□ 0.47
AC138331.1-201ENST00000549993 CLASP1Q7Z460 1538 aa18■□□□□ 0.47
AC138331.1-201ENST00000549993 POLA1P09884 1462 aaPredicted RBP17.99■□□□□ 0.47
AC138331.1-201ENST00000549993 SOGA1O94964 1423 aa17.95■□□□□ 0.46
AC138331.1-201ENST00000549993 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
AC138331.1-201ENST00000549993 RAD54L2Q9Y4B4 1467 aa17.95■□□□□ 0.46
AC138331.1-201ENST00000549993 SNAPC4Q5SXM2 1469 aa17.93■□□□□ 0.46
AC138331.1-201ENST00000549993 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
AC138331.1-201ENST00000549993 SYNJ1O43426 1573 aa17.88■□□□□ 0.45
AC138331.1-201ENST00000549993 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
AC138331.1-201ENST00000549993 SYNJ2O15056 1496 aa17.84■□□□□ 0.45
AC138331.1-201ENST00000549993 GRIN2BQ13224 1484 aa17.83■□□□□ 0.45
AC138331.1-201ENST00000549993 ILDR1Q86SU0 546 aaPredicted RBP17.81■□□□□ 0.44
AC138331.1-201ENST00000549993 WDR97A6NE52 1622 aa17.8■□□□□ 0.44
AC138331.1-201ENST00000549993 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
AC138331.1-201ENST00000549993 KDM4FA0A1W2PPD8 638 aa17.7■□□□□ 0.42
AC138331.1-201ENST00000549993 ERCC6L2Q5T890 1561 aa17.66■□□□□ 0.42
AC138331.1-201ENST00000549993 CUX1P39880 1505 aa17.64■□□□□ 0.41
AC138331.1-201ENST00000549993 FAM69CQ0P6D2 419 aa17.6■□□□□ 0.41
AC138331.1-201ENST00000549993 NUP160Q12769 1436 aa17.59■□□□□ 0.41
AC138331.1-201ENST00000549993 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
AC138331.1-201ENST00000549993 CEP170Q5SW79 1584 aa17.57■□□□□ 0.4
AC138331.1-201ENST00000549993 ABCA10Q8WWZ4 1543 aa17.56■□□□□ 0.4
AC138331.1-201ENST00000549993 ABCC10Q5T3U5 1492 aa17.54■□□□□ 0.4
AC138331.1-201ENST00000549993 NPM1P06748 294 aaKnown RBP eCLIP17.48■□□□□ 0.39
AC138331.1-201ENST00000549993 JPH4Q96JJ6 628 aa17.48■□□□□ 0.39
AC138331.1-201ENST00000549993 KIF13AQ9H1H9 1805 aa17.48■□□□□ 0.39
AC138331.1-201ENST00000549993 PRG4Q92954 1404 aaPredicted RBP17.47■□□□□ 0.39
AC138331.1-201ENST00000549993 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
AC138331.1-201ENST00000549993 PBRM1Q86U86 1689 aa17.47■□□□□ 0.39
AC138331.1-201ENST00000549993 SHROOM2Q13796 1616 aa17.47■□□□□ 0.39
AC138331.1-201ENST00000549993 FHAD1B1AJZ9 1412 aa17.45■□□□□ 0.38
AC138331.1-201ENST00000549993 MAPKBP1O60336 1514 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms