RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 GAS2L2Q8NHY3 880 aa19.83■□□□□ 0.76
CACFD1-206ENST00000540581 SLC52A1Q9NWF4 448 aa19.82■□□□□ 0.76
CACFD1-206ENST00000540581 MRE11P49959 708 aa19.82■□□□□ 0.76
CACFD1-206ENST00000540581 NCBP3Q53F19 620 aaKnown RBP19.82■□□□□ 0.76
CACFD1-206ENST00000540581 NCLP19338 710 aaKnown RBP19.81■□□□□ 0.76
CACFD1-206ENST00000540581 OTUD7AQ8TE49 926 aaPredicted RBP19.81■□□□□ 0.76
CACFD1-206ENST00000540581 HECW2Q9P2P5 1572 aa19.81■□□□□ 0.76
CACFD1-206ENST00000540581 MLH3Q9UHC1 1453 aa19.81■□□□□ 0.76
CACFD1-206ENST00000540581 GBP4Q96PP9 640 aa19.81■□□□□ 0.76
CACFD1-206ENST00000540581 YEATS2Q9ULM3 1422 aa19.8■□□□□ 0.76
CACFD1-206ENST00000540581 LRRC7Q96NW7 1537 aa19.8■□□□□ 0.76
CACFD1-206ENST00000540581 SMARCA5O60264 1052 aaPredicted RBP19.8■□□□□ 0.76
CACFD1-206ENST00000540581 GCC1Q96CN9 775 aa19.8■□□□□ 0.76
CACFD1-206ENST00000540581 GNAI1P63096 354 aa19.8■□□□□ 0.76
CACFD1-206ENST00000540581 K7ELQ4 463 aaPredicted RBP19.79■□□□□ 0.76
CACFD1-206ENST00000540581 PTPRMP28827 1452 aa19.79■□□□□ 0.76
CACFD1-206ENST00000540581 SNX21Q969T3 373 aa19.79■□□□□ 0.76
CACFD1-206ENST00000540581 GSPT1P15170 499 aaKnown RBP19.78■□□□□ 0.76
CACFD1-206ENST00000540581 TXNDC2Q86VQ3 553 aa19.78■□□□□ 0.76
CACFD1-206ENST00000540581 DDIT3P35638 169 aa19.77■□□□□ 0.76
CACFD1-206ENST00000540581 RAB3GAP1Q15042 981 aa19.77■□□□□ 0.76
CACFD1-206ENST00000540581 AEBP1Q8IUX7 1158 aa19.77■□□□□ 0.76
CACFD1-206ENST00000540581 TRIM44Q96DX7 344 aaPredicted RBP19.77■□□□□ 0.76
CACFD1-206ENST00000540581 FOXD4L5Q5VV16 416 aaPredicted RBP19.77■□□□□ 0.75
CACFD1-206ENST00000540581 FOXD4L4Q8WXT5 416 aaPredicted RBP19.77■□□□□ 0.75
CACFD1-206ENST00000540581 PIK3C2BO00750 1634 aa19.76■□□□□ 0.75
CACFD1-206ENST00000540581 PNPLA6Q8IY17 1366 aa19.76■□□□□ 0.75
CACFD1-206ENST00000540581 ERBB4Q15303 1308 aa19.76■□□□□ 0.75
CACFD1-206ENST00000540581 CDC45O75419 566 aa19.76■□□□□ 0.75
CACFD1-206ENST00000540581 IL13P35225 146 aa19.76■□□□□ 0.75
CACFD1-206ENST00000540581 MIS18AQ9NYP9 233 aa19.76■□□□□ 0.75
CACFD1-206ENST00000540581 MCM10Q7L590 875 aa19.75■□□□□ 0.75
CACFD1-206ENST00000540581 FAM135BQ49AJ0 1406 aa19.75■□□□□ 0.75
CACFD1-206ENST00000540581 CHAMP1Q96JM3 812 aa19.75■□□□□ 0.75
CACFD1-206ENST00000540581 IFT57Q9NWB7 429 aa19.75■□□□□ 0.75
CACFD1-206ENST00000540581 MYO5BQ9ULV0 1848 aa19.75■□□□□ 0.75
CACFD1-206ENST00000540581 PLEKHM2Q8IWE5 1019 aa19.74■□□□□ 0.75
CACFD1-206ENST00000540581 DDX49Q9Y6V7 483 aaKnown RBP19.74■□□□□ 0.75
CACFD1-206ENST00000540581 PKP1Q13835 747 aa19.73■□□□□ 0.75
CACFD1-206ENST00000540581 MCTP1Q6DN14 999 aa19.73■□□□□ 0.75
CACFD1-206ENST00000540581 CALD1Q05682 793 aaKnown RBP19.73■□□□□ 0.75
CACFD1-206ENST00000540581 COG3Q96JB2 828 aa19.72■□□□□ 0.75
CACFD1-206ENST00000540581 SULT6B1Q6IMI4 303 aa19.72■□□□□ 0.75
CACFD1-206ENST00000540581 SLC4A10Q6U841 1118 aa19.72■□□□□ 0.75
CACFD1-206ENST00000540581 ABCC4O15439 1325 aa19.72■□□□□ 0.75
CACFD1-206ENST00000540581 NCOA3Q9Y6Q9 1424 aa19.71■□□□□ 0.75
CACFD1-206ENST00000540581 CFAP44Q96MT7 982 aa19.71■□□□□ 0.75
CACFD1-206ENST00000540581 API5Q9BZZ5 524 aaKnown RBP19.71■□□□□ 0.75
CACFD1-206ENST00000540581 ESPNB1AK53 854 aa19.71■□□□□ 0.75
CACFD1-206ENST00000540581 CHMP4BQ9H444 224 aaKnown RBP19.7■□□□□ 0.74
CACFD1-206ENST00000540581 TSHZ3Q63HK5 1081 aa19.7■□□□□ 0.74
CACFD1-206ENST00000540581 ARHGAP45Q92619 1136 aa19.7■□□□□ 0.74
CACFD1-206ENST00000540581 CLCN1P35523 988 aa19.69■□□□□ 0.74
CACFD1-206ENST00000540581 NOL8Q76FK4 1167 aaKnown RBP19.69■□□□□ 0.74
CACFD1-206ENST00000540581 CIZ1Q9ULV3 898 aaPredicted RBP19.69■□□□□ 0.74
CACFD1-206ENST00000540581 ZFYVE9O95405 1425 aa19.69■□□□□ 0.74
CACFD1-206ENST00000540581 GOLGA6L22H0YM25 854 aa19.69■□□□□ 0.74
CACFD1-206ENST00000540581 ZNF853P0CG23 659 aa19.69■□□□□ 0.74
CACFD1-206ENST00000540581 ZNF428Q96B54 188 aa19.69■□□□□ 0.74
CACFD1-206ENST00000540581 BAG4O95429 457 aaKnown RBP19.68■□□□□ 0.74
CACFD1-206ENST00000540581 MEIS3Q99687 375 aa19.68■□□□□ 0.74
CACFD1-206ENST00000540581 AK9Q5TCS8 1911 aa19.68■□□□□ 0.74
CACFD1-206ENST00000540581 NUDT16Q96DE0 195 aaKnown RBP19.68■□□□□ 0.74
CACFD1-206ENST00000540581 ARHGEF40Q8TER5 1519 aa19.67■□□□□ 0.74
CACFD1-206ENST00000540581 TTC22Q5TAA0 569 aa19.67■□□□□ 0.74
CACFD1-206ENST00000540581 ZGPATQ8N5A5 531 aaKnown RBP19.67■□□□□ 0.74
CACFD1-206ENST00000540581 MED14O60244 1454 aa19.67■□□□□ 0.74
CACFD1-206ENST00000540581 F6X3S4 739 aa19.67■□□□□ 0.74
CACFD1-206ENST00000540581 CAVIN1Q6NZI2 390 aaKnown RBP19.67■□□□□ 0.74
CACFD1-206ENST00000540581 NECTIN2Q92692 538 aa19.67■□□□□ 0.74
CACFD1-206ENST00000540581 FAM69CQ0P6D2 419 aa19.66■□□□□ 0.74
CACFD1-206ENST00000540581 TPRNQ4KMQ1 711 aa19.66■□□□□ 0.74
CACFD1-206ENST00000540581 CFAP74Q9C0B2 1584 aa19.66■□□□□ 0.74
CACFD1-206ENST00000540581 DIP2CQ9Y2E4 1556 aa19.66■□□□□ 0.74
CACFD1-206ENST00000540581 WASLO00401 505 aaPredicted RBP19.66■□□□□ 0.74
CACFD1-206ENST00000540581 SDSP20132 328 aa19.66■□□□□ 0.74
CACFD1-206ENST00000540581 BRPF1P55201 1214 aaPredicted RBP19.66■□□□□ 0.74
CACFD1-206ENST00000540581 PTCH1Q13635 1447 aa19.66■□□□□ 0.74
CACFD1-206ENST00000540581 DCTPP1Q9H773 170 aa19.66■□□□□ 0.74
CACFD1-206ENST00000540581 ALKQ9UM73 1620 aa19.65■□□□□ 0.74
CACFD1-206ENST00000540581 NASPP49321 788 aaPredicted RBP19.65■□□□□ 0.74
CACFD1-206ENST00000540581 LMOD3Q0VAK6 560 aa19.65■□□□□ 0.74
CACFD1-206ENST00000540581 SKOR2Q2VWA4 1001 aaPredicted RBP19.65■□□□□ 0.74
CACFD1-206ENST00000540581 FOXD4L6Q3SYB3 417 aaPredicted RBP19.65■□□□□ 0.74
CACFD1-206ENST00000540581 FOXD4L3Q6VB84 417 aaPredicted RBP19.65■□□□□ 0.74
CACFD1-206ENST00000540581 RIMS2Q9UQ26 1411 aa19.65■□□□□ 0.74
CACFD1-206ENST00000540581 SLC4A2P04920 1241 aa19.64■□□□□ 0.73
CACFD1-206ENST00000540581 MAP2P11137 1827 aaKnown RBP19.64■□□□□ 0.73
CACFD1-206ENST00000540581 FOXO3O43524 673 aa19.63■□□□□ 0.73
CACFD1-206ENST00000540581 UBE2Q2Q8WVN8 375 aa19.63■□□□□ 0.73
CACFD1-206ENST00000540581 USP26Q9BXU7 913 aa19.63■□□□□ 0.73
CACFD1-206ENST00000540581 RBM27Q9P2N5 1060 aaKnown RBP19.63■□□□□ 0.73
CACFD1-206ENST00000540581 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
CACFD1-206ENST00000540581 CEP85Q6P2H3 762 aa19.62■□□□□ 0.73
CACFD1-206ENST00000540581 MSH6P52701 1360 aa19.62■□□□□ 0.73
CACFD1-206ENST00000540581 PRPF40AO75400 957 aaKnown RBP19.62■□□□□ 0.73
CACFD1-206ENST00000540581 RABEP1Q15276 862 aa19.62■□□□□ 0.73
CACFD1-206ENST00000540581 HSP90AB2PQ58FF8 381 aa19.62■□□□□ 0.73
CACFD1-206ENST00000540581 INTS3Q68E01 1043 aaKnown RBP19.62■□□□□ 0.73
CACFD1-206ENST00000540581 EIF4A2Q14240 407 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms