RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 ZMYND10O75800 440 aa8.44□□□□□ -1.06
SNHG1-207ENST00000537965 PIP4K2BP78356 416 aa8.44□□□□□ -1.06
SNHG1-207ENST00000537965 ZC3H15Q8WU90 426 aaKnown RBP8.44□□□□□ -1.06
SNHG1-207ENST00000537965 MIA2Q96PC5 1412 aa8.44□□□□□ -1.06
SNHG1-207ENST00000537965 UGGT1Q9NYU2 1555 aa8.44□□□□□ -1.06
SNHG1-207ENST00000537965 SLC10A3P09131 477 aa8.43□□□□□ -1.06
SNHG1-207ENST00000537965 KCNC4Q03721 635 aa8.43□□□□□ -1.06
SNHG1-207ENST00000537965 TJAP1Q5JTD0 557 aa8.43□□□□□ -1.06
SNHG1-207ENST00000537965 FBXO31Q5XUX0 539 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-207ENST00000537965 BARGINQ6ZT62 677 aa8.43□□□□□ -1.06
SNHG1-207ENST00000537965 PRR14Q9BWN1 585 aa8.43□□□□□ -1.06
SNHG1-207ENST00000537965 ARHGEF5Q12774 1597 aa8.43□□□□□ -1.06
SNHG1-207ENST00000537965 ZC3H13Q5T200 1668 aaKnown RBP8.43□□□□□ -1.06
SNHG1-207ENST00000537965 HSPA1LP34931 641 aa8.42□□□□□ -1.06
SNHG1-207ENST00000537965 NLRP7Q8WX94 980 aa8.42□□□□□ -1.06
SNHG1-207ENST00000537965 MED14O60244 1454 aa8.42□□□□□ -1.06
SNHG1-207ENST00000537965 CAMSAP2Q08AD1 1489 aa8.42□□□□□ -1.06
SNHG1-207ENST00000537965 NEURL4Q96JN8 1562 aa8.42□□□□□ -1.06
SNHG1-207ENST00000537965 IQGAP1P46940 1657 aa8.42□□□□□ -1.06
SNHG1-207ENST00000537965 NCOA2Q15596 1464 aa8.41□□□□□ -1.06
SNHG1-207ENST00000537965 NPHP4O75161 1426 aaPredicted RBP8.41□□□□□ -1.06
SNHG1-207ENST00000537965 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.41□□□□□ -1.06
SNHG1-207ENST00000537965 CCDC102AQ96A19 550 aa8.41□□□□□ -1.06
SNHG1-207ENST00000537965 MTRQ99707 1265 aa8.41□□□□□ -1.06
SNHG1-207ENST00000537965 MED1Q15648 1581 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-207ENST00000537965 BCANQ96GW7 911 aa8.4□□□□□ -1.06
SNHG1-207ENST00000537965 IL21Q9HBE4 155 aa8.4□□□□□ -1.06
SNHG1-207ENST00000537965 RNF17Q9BXT8 1623 aaKnown RBP8.4□□□□□ -1.07
SNHG1-207ENST00000537965 EIF2AK4Q9P2K8 1649 aaKnown RBP8.4□□□□□ -1.07
SNHG1-207ENST00000537965 VWDEQ8N2E2 1590 aa8.39□□□□□ -1.07
SNHG1-207ENST00000537965 ACTN4O43707 911 aaKnown RBP8.39□□□□□ -1.07
SNHG1-207ENST00000537965 CFHP08603 1231 aa8.39□□□□□ -1.07
SNHG1-207ENST00000537965 KMT5BQ4FZB7 885 aa8.39□□□□□ -1.07
SNHG1-207ENST00000537965 SULF1Q8IWU6 871 aa8.39□□□□□ -1.07
SNHG1-207ENST00000537965 MAST1Q9Y2H9 1570 aa8.39□□□□□ -1.07
SNHG1-207ENST00000537965 A0A0G2JS52 829 aa8.38□□□□□ -1.07
SNHG1-207ENST00000537965 KRI1Q8N9T8 703 aaKnown RBP8.38□□□□□ -1.07
SNHG1-207ENST00000537965 SYNMO15061 1565 aa8.38□□□□□ -1.07
SNHG1-207ENST00000537965 CEP152O94986 1710 aa8.37□□□□□ -1.07
SNHG1-207ENST00000537965 DDX11L8A8MPP1 907 aa8.37□□□□□ -1.07
SNHG1-207ENST00000537965 PCDHB3Q9Y5E6 796 aa8.37□□□□□ -1.07
SNHG1-207ENST00000537965 EID1Q9Y6B2 187 aa8.37□□□□□ -1.07
SNHG1-207ENST00000537965 STRCP1A6NGW2 1772 aa8.37□□□□□ -1.07
SNHG1-207ENST00000537965 UBR1Q8IWV7 1749 aa8.37□□□□□ -1.07
SNHG1-207ENST00000537965 ABCC3O15438 1527 aa8.36□□□□□ -1.07
SNHG1-207ENST00000537965 COPS2P61201 443 aa8.36□□□□□ -1.07
SNHG1-207ENST00000537965 ZNF516Q92618 1163 aa8.36□□□□□ -1.07
SNHG1-207ENST00000537965 LRRC7Q96NW7 1537 aa8.35□□□□□ -1.07
SNHG1-207ENST00000537965 ERVK-7P63135 1459 aa8.35□□□□□ -1.07
SNHG1-207ENST00000537965 MDM2Q00987 491 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-207ENST00000537965 RDH13Q8NBN7 331 aa8.35□□□□□ -1.07
SNHG1-207ENST00000537965 DUOX2Q9NRD8 1548 aa8.34□□□□□ -1.07
SNHG1-207ENST00000537965 LRRC9Q6ZRR7 1453 aa8.34□□□□□ -1.07
SNHG1-207ENST00000537965 SCAF11Q99590 1463 aaKnown RBP8.34□□□□□ -1.07
SNHG1-207ENST00000537965 BLOC1S3Q6QNY0 202 aa8.34□□□□□ -1.07
SNHG1-207ENST00000537965 TXNDC2Q86VQ3 553 aa8.34□□□□□ -1.07
SNHG1-207ENST00000537965 TMUB1Q9BVT8 246 aa8.34□□□□□ -1.07
SNHG1-207ENST00000537965 MYOM3Q5VTT5 1437 aa8.34□□□□□ -1.07
SNHG1-207ENST00000537965 MAP3K1Q13233 1512 aa8.34□□□□□ -1.08
SNHG1-207ENST00000537965 KDM5AP29375 1690 aaKnown RBP8.34□□□□□ -1.08
SNHG1-207ENST00000537965 XIRP1Q702N8 1843 aaKnown RBP8.33□□□□□ -1.08
SNHG1-207ENST00000537965 ZPR1O75312 459 aa8.33□□□□□ -1.08
SNHG1-207ENST00000537965 RGS20O76081 388 aa8.33□□□□□ -1.08
SNHG1-207ENST00000537965 CLCN1P35523 988 aa8.33□□□□□ -1.08
SNHG1-207ENST00000537965 GCGRP47871 477 aa8.33□□□□□ -1.08
SNHG1-207ENST00000537965 ARHGAP31Q2M1Z3 1444 aa8.33□□□□□ -1.08
SNHG1-207ENST00000537965 GPCPD1Q9NPB8 672 aa8.33□□□□□ -1.08
SNHG1-207ENST00000537965 SLIT1O75093 1534 aa8.33□□□□□ -1.08
SNHG1-207ENST00000537965 KANK1Q14678 1352 aa8.33□□□□□ -1.08
SNHG1-207ENST00000537965 VPS8Q8N3P4 1428 aa8.32□□□□□ -1.08
SNHG1-207ENST00000537965 CD46P15529 392 aa8.32□□□□□ -1.08
SNHG1-207ENST00000537965 ALKQ9UM73 1620 aa8.32□□□□□ -1.08
SNHG1-207ENST00000537965 NKX2-3Q8TAU0 364 aa8.31□□□□□ -1.08
SNHG1-207ENST00000537965 MROH1Q8NDA8 1641 aa8.31□□□□□ -1.08
SNHG1-207ENST00000537965 ARHGAP23Q9P227 1491 aa8.31□□□□□ -1.08
SNHG1-207ENST00000537965 CROCC2H7BZ55 1655 aa8.3□□□□□ -1.08
SNHG1-207ENST00000537965 ERBINQ96RT1 1412 aa8.3□□□□□ -1.08
SNHG1-207ENST00000537965 NR1I2O75469 434 aa8.3□□□□□ -1.08
SNHG1-207ENST00000537965 LTKP29376 864 aa8.3□□□□□ -1.08
SNHG1-207ENST00000537965 AMHR2Q16671 573 aa8.3□□□□□ -1.08
SNHG1-207ENST00000537965 FAM217BQ9NTX9 383 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-207ENST00000537965 KIF15Q9NS87 1388 aa8.3□□□□□ -1.08
SNHG1-207ENST00000537965 FAM135BQ49AJ0 1406 aa8.29□□□□□ -1.08
SNHG1-207ENST00000537965 PRDM15P57071 1507 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-207ENST00000537965 PIK3C2BO00750 1634 aa8.29□□□□□ -1.08
SNHG1-207ENST00000537965 ATP6V1AP38606 617 aa8.29□□□□□ -1.08
SNHG1-207ENST00000537965 FUT2Q10981 343 aa8.29□□□□□ -1.08
SNHG1-207ENST00000537965 PUS10Q3MIT2 529 aaKnown RBP8.29□□□□□ -1.08
SNHG1-207ENST00000537965 SCUBE3Q8IX30 993 aa8.29□□□□□ -1.08
SNHG1-207ENST00000537965 AK7Q96M32 723 aa8.29□□□□□ -1.08
SNHG1-207ENST00000537965 REPIN1Q9BWE0 567 aaKnown RBP8.29□□□□□ -1.08
SNHG1-207ENST00000537965 RRP7BPQ9NSQ0 103 aa8.29□□□□□ -1.08
SNHG1-207ENST00000537965 TMEM2Q9UHN6 1383 aa8.28□□□□□ -1.08
SNHG1-207ENST00000537965 TRIM66O15016 1216 aa8.28□□□□□ -1.08
SNHG1-207ENST00000537965 KCNA6P17658 529 aa8.28□□□□□ -1.08
SNHG1-207ENST00000537965 MORN1Q5T089 497 aa8.28□□□□□ -1.08
SNHG1-207ENST00000537965 PPP1R18Q6NYC8 613 aa8.28□□□□□ -1.08
SNHG1-207ENST00000537965 PTPN23Q9H3S7 1636 aa8.28□□□□□ -1.08
SNHG1-207ENST00000537965 EFCAB6Q5THR3 1501 aa8.28□□□□□ -1.08
SNHG1-207ENST00000537965 ANKRD30AQ9BXX3 1397 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms