RNA–Protein interactions for RNA: ENST00000535603.5

IFRD1-216, Transcript of interferon related developmental regulator 1, humanhuman

TSL 2 BASIC

Gene IFRD1, Length 3,397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-216ENST00000535603 LRP5O75197 1615 aa8.46□□□□□ -1.06
IFRD1-216ENST00000535603 CHMP4CQ96CF2 233 aa8.45□□□□□ -1.06
IFRD1-216ENST00000535603 PRR29P0C7W0 189 aa8.45□□□□□ -1.06
IFRD1-216ENST00000535603 GPRASP1Q5JY77 1395 aa8.45□□□□□ -1.06
IFRD1-216ENST00000535603 PIK3R5Q8WYR1 880 aa8.45□□□□□ -1.06
IFRD1-216ENST00000535603 UPF1Q92900 1129 aaKnown RBP eCLIP8.45□□□□□ -1.063e-10■□□□□ 9
IFRD1-216ENST00000535603 TMX4Q9H1E5 349 aaPredicted RBP8.45□□□□□ -1.06
IFRD1-216ENST00000535603 GOLGA6CA6NDK9 693 aa8.44□□□□□ -1.06
IFRD1-216ENST00000535603 GOLGA6BA6NDN3 693 aa8.44□□□□□ -1.06
IFRD1-216ENST00000535603 ECM2O94769 699 aaPredicted RBP8.44□□□□□ -1.06
IFRD1-216ENST00000535603 GOLGA6DP0CG33 693 aa8.44□□□□□ -1.06
IFRD1-216ENST00000535603 ANP32BQ92688 251 aaKnown RBP8.44□□□□□ -1.06
IFRD1-216ENST00000535603 GOLGA6AQ9NYA3 693 aa8.44□□□□□ -1.06
IFRD1-216ENST00000535603 KLHL42Q9P2K6 505 aa8.44□□□□□ -1.06
IFRD1-216ENST00000535603 ARHGAP23Q9P227 1491 aa8.44□□□□□ -1.06
IFRD1-216ENST00000535603 CCDC144AA2RUR9 1427 aa8.44□□□□□ -1.06
IFRD1-216ENST00000535603 RPGRIP1LQ68CZ1 1315 aa8.44□□□□□ -1.06
IFRD1-216ENST00000535603 CT47B1P0C2W7 299 aaPredicted RBP8.44□□□□□ -1.06
IFRD1-216ENST00000535603 CCDC181Q5TID7 509 aa8.44□□□□□ -1.06
IFRD1-216ENST00000535603 STK26Q9P289 416 aa8.44□□□□□ -1.06
IFRD1-216ENST00000535603 ZNF500O60304 480 aaPredicted RBP8.43□□□□□ -1.06
IFRD1-216ENST00000535603 POTEAQ6S8J7 498 aa8.43□□□□□ -1.06
IFRD1-216ENST00000535603 CHIC2Q9UKJ5 165 aa8.43□□□□□ -1.06
IFRD1-216ENST00000535603 ZHX1Q9UKY1 873 aaPredicted RBP8.43□□□□□ -1.06
IFRD1-216ENST00000535603 MED14O60244 1454 aa8.43□□□□□ -1.06
IFRD1-216ENST00000535603 CEBPAP49715 358 aaPredicted RBP8.43□□□□□ -1.06
IFRD1-216ENST00000535603 VASPP50552 380 aaPredicted RBP8.43□□□□□ -1.06
IFRD1-216ENST00000535603 EP400NLQ6ZTU2 488 aa8.43□□□□□ -1.06
IFRD1-216ENST00000535603 MYO5BQ9ULV0 1848 aa8.43□□□□□ -1.06
IFRD1-216ENST00000535603 LRRC7Q96NW7 1537 aa8.42□□□□□ -1.06
IFRD1-216ENST00000535603 SCP2P22307 547 aa8.42□□□□□ -1.06
IFRD1-216ENST00000535603 KRBA2Q6ZNG9 492 aa8.42□□□□□ -1.06
IFRD1-216ENST00000535603 CARNS1A5YM72 827 aa8.41□□□□□ -1.06
IFRD1-216ENST00000535603 EPB41L2O43491 1005 aaKnown RBP8.41□□□□□ -1.06
IFRD1-216ENST00000535603 OTUD6BQ8N6M0 293 aa8.41□□□□□ -1.06
IFRD1-216ENST00000535603 GIMAP6Q6P9H5 292 aa8.41□□□□□ -1.06
IFRD1-216ENST00000535603 A2ML1A8K2U0 1454 aa8.41□□□□□ -1.06
IFRD1-216ENST00000535603 DLC1Q96QB1 1528 aa8.41□□□□□ -1.06
IFRD1-216ENST00000535603 PDE6BP35913 854 aa8.41□□□□□ -1.06
IFRD1-216ENST00000535603 ZFYVE27Q5T4F4 411 aa8.41□□□□□ -1.06
IFRD1-216ENST00000535603 ZC3H15Q8WU90 426 aaKnown RBP8.41□□□□□ -1.06
IFRD1-216ENST00000535603 STRCP1A6NGW2 1772 aa8.4□□□□□ -1.06
IFRD1-216ENST00000535603 NRXN3Q9Y4C0 1643 aa8.4□□□□□ -1.06
IFRD1-216ENST00000535603 DNTTIP2Q5QJE6 756 aaKnown RBP8.4□□□□□ -1.06
IFRD1-216ENST00000535603 ZNF280DQ6N043 979 aa8.4□□□□□ -1.06
IFRD1-216ENST00000535603 KIF3BO15066 747 aa8.39□□□□□ -1.07
IFRD1-216ENST00000535603 XIRP1Q702N8 1843 aaKnown RBP8.39□□□□□ -1.07
IFRD1-216ENST00000535603 NCKAP5LQ9HCH0 1330 aa8.39□□□□□ -1.07
IFRD1-216ENST00000535603 IFFO2Q5TF58 517 aa8.39□□□□□ -1.07
IFRD1-216ENST00000535603 CCER1Q8TC90 406 aaPredicted RBP8.39□□□□□ -1.07
IFRD1-216ENST00000535603 HIRIP3Q9BW71 556 aaPredicted RBP8.39□□□□□ -1.07
IFRD1-216ENST00000535603 PIK3C2GO75747 1445 aa8.39□□□□□ -1.07
IFRD1-216ENST00000535603 FAM135BQ49AJ0 1406 aa8.39□□□□□ -1.07
IFRD1-216ENST00000535603 GOLIM4O00461 696 aa8.38□□□□□ -1.07
IFRD1-216ENST00000535603 ITGAEP38570 1179 aa8.38□□□□□ -1.07
IFRD1-216ENST00000535603 HSP90AB3PQ58FF7 597 aa8.38□□□□□ -1.07
IFRD1-216ENST00000535603 ARHGEF1Q92888 912 aaKnown RBP8.38□□□□□ -1.07
IFRD1-216ENST00000535603 ADGRB1O14514 1584 aa8.38□□□□□ -1.07
IFRD1-216ENST00000535603 PIP4K2BP78356 416 aa8.38□□□□□ -1.07
IFRD1-216ENST00000535603 HS6ST3Q8IZP7 471 aa8.38□□□□□ -1.07
IFRD1-216ENST00000535603 GABBR1Q9UBS5 961 aa8.38□□□□□ -1.07
IFRD1-216ENST00000535603 C11orf95C9JLR9 678 aaPredicted RBP8.38□□□□□ -1.07
IFRD1-216ENST00000535603 TCERG1O14776 1098 aaKnown RBP8.38□□□□□ -1.07
IFRD1-216ENST00000535603 SH3BP5O60239 455 aa8.38□□□□□ -1.07
IFRD1-216ENST00000535603 PROCA1Q8NCQ7 364 aaPredicted RBP8.37□□□□□ -1.07
IFRD1-216ENST00000535603 MLECQ14165 292 aa8.37□□□□□ -1.07
IFRD1-216ENST00000535603 NBPF9Q3BBW0 867 aa8.37□□□□□ -1.07
IFRD1-216ENST00000535603 NWD1Q149M9 1564 aa8.37□□□□□ -1.07
IFRD1-216ENST00000535603 LONRF3Q496Y0 759 aa8.36□□□□□ -1.07
IFRD1-216ENST00000535603 ZMYM3Q14202 1370 aa8.36□□□□□ -1.07
IFRD1-216ENST00000535603 ADGRB2O60241 1585 aa8.36□□□□□ -1.07
IFRD1-216ENST00000535603 PPP1R15AO75807 674 aaPredicted RBP8.36□□□□□ -1.07
IFRD1-216ENST00000535603 ARHGEF28Q8N1W1 1705 aaKnown RBP8.36□□□□□ -1.07
IFRD1-216ENST00000535603 TONSLQ96HA7 1378 aa8.36□□□□□ -1.07
IFRD1-216ENST00000535603 DDX46Q7L014 1031 aaKnown RBP8.36□□□□□ -1.07
IFRD1-216ENST00000535603 CEP120Q8N960 986 aa8.36□□□□□ -1.07
IFRD1-216ENST00000535603 TSPAN18Q96SJ8 248 aa8.36□□□□□ -1.07
IFRD1-216ENST00000535603 ANP32CO43423 234 aa8.35□□□□□ -1.07
IFRD1-216ENST00000535603 XRN1Q8IZH2 1706 aaKnown RBP8.35□□□□□ -1.07
IFRD1-216ENST00000535603 TRIM52Q96A61 297 aa8.35□□□□□ -1.07
IFRD1-216ENST00000535603 CTDP1Q9Y5B0 961 aaPredicted RBP8.35□□□□□ -1.07
IFRD1-216ENST00000535603 TNRQ92752 1358 aa8.35□□□□□ -1.07
IFRD1-216ENST00000535603 SBNO2Q9Y2G9 1366 aa8.35□□□□□ -1.07
IFRD1-216ENST00000535603 ZKSCAN2Q63HK3 967 aa8.35□□□□□ -1.07
IFRD1-216ENST00000535603 SDR16C5Q8N3Y7 309 aa8.35□□□□□ -1.07
IFRD1-216ENST00000535603 TRIM44Q96DX7 344 aaPredicted RBP8.35□□□□□ -1.07
IFRD1-216ENST00000535603 TECPR2O15040 1411 aa8.34□□□□□ -1.07
IFRD1-216ENST00000535603 CREB3O43889 395 aa8.34□□□□□ -1.07
IFRD1-216ENST00000535603 RNF217Q8TC41 542 aa8.34□□□□□ -1.07
IFRD1-216ENST00000535603 GPATCH3Q96I76 525 aa8.34□□□□□ -1.07
IFRD1-216ENST00000535603 ZC3H4Q9UPT8 1303 aaKnown RBP8.34□□□□□ -1.07
IFRD1-216ENST00000535603 WASHC2CQ9Y4E1 1318 aa8.34□□□□□ -1.07
IFRD1-216ENST00000535603 BANK1Q8NDB2 785 aa8.33□□□□□ -1.08
IFRD1-216ENST00000535603 FAM117AQ9C073 453 aa8.33□□□□□ -1.08
IFRD1-216ENST00000535603 SHPRHQ149N8 1683 aa8.33□□□□□ -1.08
IFRD1-216ENST00000535603 PMM1Q92871 262 aa8.33□□□□□ -1.08
IFRD1-216ENST00000535603 IGSF5Q9NSI5 407 aa8.33□□□□□ -1.08
IFRD1-216ENST00000535603 ASXL1Q8IXJ9 1541 aa8.33□□□□□ -1.08
IFRD1-216ENST00000535603 MAP2K1Q02750 393 aaPredicted RBP8.33□□□□□ -1.08
IFRD1-216ENST00000535603 PPP4R3BQ5MIZ7 849 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms