RNA–Protein interactions for RNA: ENST00000535603.5

IFRD1-216, Transcript of interferon related developmental regulator 1, humanhuman

TSL 2 BASIC

Gene IFRD1, Length 3,397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-216ENST00000535603 NISCHQ9Y2I1 1504 aa13.88□□□□□ -0.19
IFRD1-216ENST00000535603 SLC24A1O60721 1099 aa12.96□□□□□ -0.34
IFRD1-216ENST00000535603 AEBP2Q6ZN18 517 aaPredicted RBP12.55□□□□□ -0.4
IFRD1-216ENST00000535603 CCDC180Q9P1Z9 1646 aa12.48□□□□□ -0.41
IFRD1-216ENST00000535603 CHIC1Q5VXU3 224 aa12.43□□□□□ -0.42
IFRD1-216ENST00000535603 ABCC9O60706 1549 aa12.25□□□□□ -0.45
IFRD1-216ENST00000535603 DNAJC5BQ9UF47 199 aa12.1□□□□□ -0.47
IFRD1-216ENST00000535603 PRKCSHP14314 528 aaPredicted RBP12.05□□□□□ -0.48
IFRD1-216ENST00000535603 MYT1Q01538 1121 aa11.96□□□□□ -0.49
IFRD1-216ENST00000535603 PELP1Q8IZL8 1130 aaKnown RBP11.9□□□□□ -0.51
IFRD1-216ENST00000535603 DAXXQ9UER7 740 aaPredicted RBP11.87□□□□□ -0.51
IFRD1-216ENST00000535603 DNAJC5Q9H3Z4 198 aa11.84□□□□□ -0.51
IFRD1-216ENST00000535603 DCAF1Q9Y4B6 1507 aa11.79□□□□□ -0.52
IFRD1-216ENST00000535603 EHMT2Q96KQ7 1210 aa11.77□□□□□ -0.53
IFRD1-216ENST00000535603 MYO15BQ96JP2 1530 aa11.76□□□□□ -0.53
IFRD1-216ENST00000535603 TTBK1Q5TCY1 1321 aaPredicted RBP11.75□□□□□ -0.53
IFRD1-216ENST00000535603 APLP2Q06481 763 aa11.72□□□□□ -0.53
IFRD1-216ENST00000535603 PLPPR3Q6T4P5 718 aa11.71□□□□□ -0.53
IFRD1-216ENST00000535603 ZCCHC6Q5VYS8 1495 aaKnown RBP11.7□□□□□ -0.54
IFRD1-216ENST00000535603 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.54
IFRD1-216ENST00000535603 RB1CC1Q8TDY2 1594 aa11.63□□□□□ -0.55
IFRD1-216ENST00000535603 RTN4Q9NQC3 1192 aaKnown RBP11.53□□□□□ -0.56
IFRD1-216ENST00000535603 NACADO15069 1562 aa11.52□□□□□ -0.57
IFRD1-216ENST00000535603 PHF23Q9BUL5 403 aaPredicted RBP11.41□□□□□ -0.58
IFRD1-216ENST00000535603 UNC13AQ9UPW8 1703 aa11.41□□□□□ -0.58
IFRD1-216ENST00000535603 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
IFRD1-216ENST00000535603 SHROOM4Q9ULL8 1493 aa11.35□□□□□ -0.59
IFRD1-216ENST00000535603 BICRAQ9NZM4 1560 aa11.3□□□□□ -0.6
IFRD1-216ENST00000535603 CECR2Q9BXF3 1484 aa11.23□□□□□ -0.61
IFRD1-216ENST00000535603 CC2D2AQ9P2K1 1620 aa11.23□□□□□ -0.61
IFRD1-216ENST00000535603 EIF5BO60841 1220 aaKnown RBP11.21□□□□□ -0.61
IFRD1-216ENST00000535603 CUX2O14529 1486 aa11.2□□□□□ -0.62
IFRD1-216ENST00000535603 TIMELESSQ9UNS1 1208 aa11.15□□□□□ -0.62
IFRD1-216ENST00000535603 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
IFRD1-216ENST00000535603 PABPN1Q86U42 306 aaKnown RBP eCLIP11.1□□□□□ -0.63
IFRD1-216ENST00000535603 KLHL34Q8N239 644 aa11.05□□□□□ -0.64
IFRD1-216ENST00000535603 EIF4G1Q04637 1599 aaKnown RBP11.04□□□□□ -0.64
IFRD1-216ENST00000535603 BCL11AQ9H165 835 aa11.02□□□□□ -0.65
IFRD1-216ENST00000535603 SCRIBQ14160 1630 aa10.98□□□□□ -0.65
IFRD1-216ENST00000535603 TULP1O00294 542 aaPredicted RBP10.96□□□□□ -0.65
IFRD1-216ENST00000535603 ARXQ96QS3 562 aa10.95□□□□□ -0.66
IFRD1-216ENST00000535603 RANGAP1P46060 587 aaPredicted RBP10.91□□□□□ -0.66
IFRD1-216ENST00000535603 KCNA4P22459 653 aa10.88□□□□□ -0.67
IFRD1-216ENST00000535603 AMER1Q5JTC6 1135 aaPredicted RBP10.85□□□□□ -0.67
IFRD1-216ENST00000535603 FAM9AQ8IZU1 332 aaPredicted RBP10.83□□□□□ -0.68
IFRD1-216ENST00000535603 PEG3Q9GZU2 1588 aa10.82□□□□□ -0.68
IFRD1-216ENST00000535603 PODXL2Q9NZ53 605 aa10.77□□□□□ -0.68
IFRD1-216ENST00000535603 BAZ1AQ9NRL2 1556 aaPredicted RBP10.77□□□□□ -0.68
IFRD1-216ENST00000535603 SMARCA4P51532 1647 aa10.74□□□□□ -0.69
IFRD1-216ENST00000535603 DCAF8L2P0C7V8 631 aa10.68□□□□□ -0.7
IFRD1-216ENST00000535603 TAOK2Q9UL54 1235 aa10.68□□□□□ -0.7
IFRD1-216ENST00000535603 SMARCA2P51531 1590 aa10.67□□□□□ -0.7
IFRD1-216ENST00000535603 TRIM41Q8WV44 630 aa10.67□□□□□ -0.7
IFRD1-216ENST00000535603 ERCC6Q03468 1493 aa10.67□□□□□ -0.7
IFRD1-216ENST00000535603 HOMEZQ8IX15 550 aa10.67□□□□□ -0.7
IFRD1-216ENST00000535603 THOC2Q8NI27 1593 aaKnown RBP10.65□□□□□ -0.7
IFRD1-216ENST00000535603 HMGXB3Q12766 1538 aa10.63□□□□□ -0.71
IFRD1-216ENST00000535603 CSRNP3Q8WYN3 585 aa10.63□□□□□ -0.71
IFRD1-216ENST00000535603 TPRNQ4KMQ1 711 aa10.6□□□□□ -0.71
IFRD1-216ENST00000535603 RSF1Q96T23 1441 aaPredicted RBP10.59□□□□□ -0.71
IFRD1-216ENST00000535603 MROH2BQ7Z745 1585 aa10.58□□□□□ -0.72
IFRD1-216ENST00000535603 TOP2AP11388 1531 aaKnown RBP10.57□□□□□ -0.72
IFRD1-216ENST00000535603 NCAPD3P42695 1498 aa10.53□□□□□ -0.72
IFRD1-216ENST00000535603 ATAD2BQ9ULI0 1458 aa10.5□□□□□ -0.73
IFRD1-216ENST00000535603 WIZO95785 1651 aa10.5□□□□□ -0.73
IFRD1-216ENST00000535603 NPM2Q86SE8 214 aaKnown RBP10.47□□□□□ -0.73
IFRD1-216ENST00000535603 PRDM2Q13029 1718 aa10.46□□□□□ -0.74
IFRD1-216ENST00000535603 ADRA2BP18089 450 aa10.45□□□□□ -0.74
IFRD1-216ENST00000535603 C14orf37Q86TY3 774 aa10.45□□□□□ -0.74
IFRD1-216ENST00000535603 LAMC3Q9Y6N6 1575 aa10.42□□□□□ -0.74
IFRD1-216ENST00000535603 RIMBP3CA6NJZ7 1639 aa10.4□□□□□ -0.75
IFRD1-216ENST00000535603 RIMBP3BA6NNM3 1639 aa10.4□□□□□ -0.75
IFRD1-216ENST00000535603 RIMBP3Q9UFD9 1639 aa10.4□□□□□ -0.75
IFRD1-216ENST00000535603 PDIA4P13667 645 aaKnown RBP10.39□□□□□ -0.75
IFRD1-216ENST00000535603 BAZ1BQ9UIG0 1483 aaKnown RBP10.38□□□□□ -0.75
IFRD1-216ENST00000535603 HAP1P54257 671 aaPredicted RBP10.37□□□□□ -0.75
IFRD1-216ENST00000535603 GTF3C3Q9Y5Q9 886 aa10.37□□□□□ -0.75
IFRD1-216ENST00000535603 LOC105371045A0A1W2PR82 267 aa10.37□□□□□ -0.75
IFRD1-216ENST00000535603 KIF21AQ7Z4S6 1674 aa10.36□□□□□ -0.75
IFRD1-216ENST00000535603 BCANQ96GW7 911 aa10.34□□□□□ -0.75
IFRD1-216ENST00000535603 WDR62O43379 1518 aa10.33□□□□□ -0.76
IFRD1-216ENST00000535603 NESP48681 1621 aa10.32□□□□□ -0.76
IFRD1-216ENST00000535603 UBE2Q2Q8WVN8 375 aa10.28□□□□□ -0.76
IFRD1-216ENST00000535603 OSCARQ8IYS5 282 aa10.27□□□□□ -0.77
IFRD1-216ENST00000535603 CCDC88BA6NC98 1476 aa10.26□□□□□ -0.77
IFRD1-216ENST00000535603 PDE4CQ08493 712 aa10.26□□□□□ -0.77
IFRD1-216ENST00000535603 DHX37Q8IY37 1157 aaKnown RBP10.26□□□□□ -0.77
IFRD1-216ENST00000535603 TRIM26Q12899 539 aaPredicted RBP10.26□□□□□ -0.77
IFRD1-216ENST00000535603 PDS5BQ9NTI5 1447 aa10.25□□□□□ -0.77
IFRD1-216ENST00000535603 MRC2Q9UBG0 1479 aa10.24□□□□□ -0.77
IFRD1-216ENST00000535603 CHMP4AQ9BY43 222 aa10.24□□□□□ -0.77
IFRD1-216ENST00000535603 ARHGEF11O15085 1522 aa10.23□□□□□ -0.77
IFRD1-216ENST00000535603 CFTRP13569 1480 aa10.22□□□□□ -0.77
IFRD1-216ENST00000535603 HRCP23327 699 aa10.22□□□□□ -0.77
IFRD1-216ENST00000535603 PKNOX2Q96KN3 472 aa10.2□□□□□ -0.78
IFRD1-216ENST00000535603 SUPT5HO00267 1087 aaKnown RBP10.2□□□□□ -0.78
IFRD1-216ENST00000535603 BIVM-ERCC5R4GMW8 1640 aa10.16□□□□□ -0.78
IFRD1-216ENST00000535603 ANO8Q9HCE9 1232 aaPredicted RBP10.15□□□□□ -0.78
IFRD1-216ENST00000535603 PLCB2Q00722 1185 aa10.12□□□□□ -0.79
IFRD1-216ENST00000535603 BCL11BQ9C0K0 894 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms