RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 HSP90AB2PQ58FF8 381 aa15.17■□□□□ 0.02
CHMP1B-201ENST00000526991 PUS7Q96PZ0 661 aaKnown RBP15.17■□□□□ 0.02
CHMP1B-201ENST00000526991 NRXN3Q9Y4C0 1643 aa15.17■□□□□ 0.02
CHMP1B-201ENST00000526991 RBM10P98175 930 aaKnown RBP15.16■□□□□ 0.02
CHMP1B-201ENST00000526991 ATF7IPQ6VMQ6 1270 aa15.16■□□□□ 0.02
CHMP1B-201ENST00000526991 UPF2Q9HAU5 1272 aaKnown RBP15.16■□□□□ 0.02
CHMP1B-201ENST00000526991 ADAMTS13Q76LX8 1427 aa15.16■□□□□ 0.02
CHMP1B-201ENST00000526991 NLRP1Q9C000 1473 aa15.16■□□□□ 0.02
CHMP1B-201ENST00000526991 CPS1P31327 1500 aa15.16■□□□□ 0.02
CHMP1B-201ENST00000526991 NSD2O96028 1365 aa15.16■□□□□ 0.02
CHMP1B-201ENST00000526991 FGD1P98174 961 aa15.15■□□□□ 0.02
CHMP1B-201ENST00000526991 PTPRUQ92729 1446 aa15.15■□□□□ 0.02
CHMP1B-201ENST00000526991 NINLQ9Y2I6 1382 aa15.15■□□□□ 0.02
CHMP1B-201ENST00000526991 LNPKQ9C0E8 428 aa15.15■□□□□ 0.02
CHMP1B-201ENST00000526991 SULT6B1Q6IMI4 303 aa15.14■□□□□ 0.01
CHMP1B-201ENST00000526991 REREQ9P2R6 1566 aa15.14■□□□□ 0.01
CHMP1B-201ENST00000526991 LMOD2Q6P5Q4 547 aa15.14■□□□□ 0.01
CHMP1B-201ENST00000526991 TSPYL6Q8N831 410 aa15.14■□□□□ 0.01
CHMP1B-201ENST00000526991 THEMISQ8N1K5 641 aaPredicted RBP15.13■□□□□ 0.01
CHMP1B-201ENST00000526991 RSPH6AQ9H0K4 717 aa15.13■□□□□ 0.01
CHMP1B-201ENST00000526991 KRT24Q2M2I5 525 aa15.13■□□□□ 0.01
CHMP1B-201ENST00000526991 MIS18AQ9NYP9 233 aa15.13■□□□□ 0.01
CHMP1B-201ENST00000526991 BECN1Q14457 450 aa15.13■□□□□ 0.01
CHMP1B-201ENST00000526991 TTC21BQ7Z4L5 1316 aa15.12■□□□□ 0.01
CHMP1B-201ENST00000526991 TBC1D2Q9BYX2 928 aa15.11■□□□□ 0.01
CHMP1B-201ENST00000526991 MAP2P11137 1827 aaKnown RBP15.11■□□□□ 0.01
CHMP1B-201ENST00000526991 MCM10Q7L590 875 aa15.11■□□□□ 0.01
CHMP1B-201ENST00000526991 DDX19BQ9UMR2 479 aa15.11■□□□□ 0.01
CHMP1B-201ENST00000526991 IL13P35225 146 aa15.11■□□□□ 0.01
CHMP1B-201ENST00000526991 FOXO3O43524 673 aa15.1■□□□□ 0.01
CHMP1B-201ENST00000526991 UBR1Q8IWV7 1749 aa15.1■□□□□ 0.01
CHMP1B-201ENST00000526991 NLRP6P59044 892 aa15.1■□□□□ 0.01
CHMP1B-201ENST00000526991 GLIPR1L2Q4G1C9 344 aa15.1■□□□□ 0.01
CHMP1B-201ENST00000526991 TBC1D32Q96NH3 1257 aa15.1■□□□□ 0.01
CHMP1B-201ENST00000526991 SETD1AO15047 1707 aaKnown RBP15.1■□□□□ 0.01
CHMP1B-201ENST00000526991 EIF4A2Q14240 407 aaKnown RBP15.09■□□□□ 0.01
CHMP1B-201ENST00000526991 COL3A1P02461 1466 aaPredicted RBP15.08■□□□□ 0
CHMP1B-201ENST00000526991 FCHSD2O94868 740 aa15.08■□□□□ 0
CHMP1B-201ENST00000526991 USHBP1Q8N6Y0 703 aa15.08■□□□□ 0
CHMP1B-201ENST00000526991 ATP7BP35670 1465 aa15.08■□□□□ 0
CHMP1B-201ENST00000526991 EDC4Q6P2E9 1401 aaKnown RBP15.08■□□□□ 0
CHMP1B-201ENST00000526991 CPSF1Q10570 1443 aaKnown RBP15.07■□□□□ 0
CHMP1B-201ENST00000526991 SETD1BQ9UPS6 1966 aaKnown RBP15.07■□□□□ 0
CHMP1B-201ENST00000526991 ANKRD45Q5TZF3 282 aa15.07■□□□□ 0
CHMP1B-201ENST00000526991 C22orf23Q9BZE7 217 aa15.07■□□□□ 0
CHMP1B-201ENST00000526991 ZBTB40Q9NUA8 1239 aa15.07■□□□□ 0
CHMP1B-201ENST00000526991 AMPHP49418 695 aa15.07■□□□□ 0
CHMP1B-201ENST00000526991 GZF1Q9H116 711 aaPredicted RBP15.07■□□□□ 0
CHMP1B-201ENST00000526991 PLEKHG1Q9ULL1 1385 aa15.07■□□□□ 0
CHMP1B-201ENST00000526991 IPO8O15397 1037 aaKnown RBP15.06■□□□□ 0
CHMP1B-201ENST00000526991 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.06■□□□□ 0
CHMP1B-201ENST00000526991 LRRC7Q96NW7 1537 aa15.06■□□□□ 0
CHMP1B-201ENST00000526991 AAMPQ13685 434 aa15.06■□□□□ 0
CHMP1B-201ENST00000526991 NFE2L2Q16236 605 aa15.06■□□□□ 0
CHMP1B-201ENST00000526991 ABTB2Q8N961 1025 aa15.06■□□□□ 0
CHMP1B-201ENST00000526991 USP32Q8NFA0 1604 aa15.05■□□□□ 0
CHMP1B-201ENST00000526991 C3P01024 1663 aa15.05■□□□□ 0
CHMP1B-201ENST00000526991 NECTIN2Q92692 538 aa15.05■□□□□ 0
CHMP1B-201ENST00000526991 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ 0
CHMP1B-201ENST00000526991 MBIPQ9NS73 344 aa15.05■□□□□ 0
CHMP1B-201ENST00000526991 APBB1O00213 710 aa15.05■□□□□ -0
CHMP1B-201ENST00000526991 ESCO1Q5FWF5 840 aa15.05■□□□□ -0
CHMP1B-201ENST00000526991 C8orf58Q8NAV2 365 aa15.05■□□□□ -0
CHMP1B-201ENST00000526991 FOXD4L1Q9NU39 408 aa15.05■□□□□ -0
CHMP1B-201ENST00000526991 MAP3K19Q56UN5 1328 aa15.04■□□□□ -0
CHMP1B-201ENST00000526991 PNNQ9H307 717 aaKnown RBP15.04■□□□□ -0
CHMP1B-201ENST00000526991 KIF16BQ96L93 1317 aa15.04■□□□□ -0
CHMP1B-201ENST00000526991 PNPLA6Q8IY17 1366 aa15.04■□□□□ -0
CHMP1B-201ENST00000526991 DLC1Q96QB1 1528 aa15.03■□□□□ -0
CHMP1B-201ENST00000526991 VAMP4O75379 141 aa15.03■□□□□ -0
CHMP1B-201ENST00000526991 CT47B1P0C2W7 299 aaPredicted RBP15.03■□□□□ -0
CHMP1B-201ENST00000526991 HDAC1Q13547 482 aaPredicted RBP15.03■□□□□ -0
CHMP1B-201ENST00000526991 TBX22Q9Y458 520 aa15.03■□□□□ -0
CHMP1B-201ENST00000526991 KIF20BQ96Q89 1820 aa15.03■□□□□ -0
CHMP1B-201ENST00000526991 FER1L4A9Z1Z3 1794 aa15.02■□□□□ -0
CHMP1B-201ENST00000526991 FAM135BQ49AJ0 1406 aa15.02■□□□□ -0
CHMP1B-201ENST00000526991 TWISTNBQ3B726 338 aaPredicted RBP15.02□□□□□ -0.01
CHMP1B-201ENST00000526991 IL16Q14005 1332 aa15.01□□□□□ -0.01
CHMP1B-201ENST00000526991 ANKLE2Q86XL3 938 aa15.01□□□□□ -0.01
CHMP1B-201ENST00000526991 SMC5Q8IY18 1101 aa15.01□□□□□ -0.01
CHMP1B-201ENST00000526991 CHD1LQ86WJ1 897 aa15.01□□□□□ -0.01
CHMP1B-201ENST00000526991 DDX17Q92841 729 aaKnown RBP15.01□□□□□ -0.01
CHMP1B-201ENST00000526991 RGPD8O14715 1765 aaPredicted RBP15.01□□□□□ -0.01
CHMP1B-201ENST00000526991 ADGRB2O60241 1585 aa15.01□□□□□ -0.01
CHMP1B-201ENST00000526991 MRPL50Q8N5N7 158 aaKnown RBP15.01□□□□□ -0.01
CHMP1B-201ENST00000526991 ORAI2Q96SN7 254 aa15.01□□□□□ -0.01
CHMP1B-201ENST00000526991 ANTXR1Q9H6X2 564 aa15.01□□□□□ -0.01
CHMP1B-201ENST00000526991 USP6P35125 1406 aa15□□□□□ -0.01
CHMP1B-201ENST00000526991 PAXIP1Q6ZW49 1069 aaPredicted RBP14.99□□□□□ -0.01
CHMP1B-201ENST00000526991 PLEKHG3A1L390 1219 aa14.99□□□□□ -0.01
CHMP1B-201ENST00000526991 ZBTB7BO15156 539 aaPredicted RBP14.99□□□□□ -0.01
CHMP1B-201ENST00000526991 NUCB1Q02818 461 aa14.99□□□□□ -0.01
CHMP1B-201ENST00000526991 TECPR2O15040 1411 aa14.98□□□□□ -0.01
CHMP1B-201ENST00000526991 CDC42BPGQ6DT37 1551 aa14.98□□□□□ -0.01
CHMP1B-201ENST00000526991 HSPA2P54652 639 aa14.98□□□□□ -0.01
CHMP1B-201ENST00000526991 GNAI1P63096 354 aa14.98□□□□□ -0.01
CHMP1B-201ENST00000526991 ALDH1L2Q3SY69 923 aa14.98□□□□□ -0.01
CHMP1B-201ENST00000526991 SIRT2Q8IXJ6 389 aa14.98□□□□□ -0.01
CHMP1B-201ENST00000526991 ZNF428Q96B54 188 aa14.98□□□□□ -0.01
CHMP1B-201ENST00000526991 PSME1Q06323 249 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms