RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 TOR4AQ9NXH8 423 aa9.53□□□□□ -0.88
ATPAF1-208ENST00000526821 DISP1Q96F81 1524 aa9.52□□□□□ -0.88
ATPAF1-208ENST00000526821 PCMTD1Q96MG8 357 aaPredicted RBP9.52□□□□□ -0.89
ATPAF1-208ENST00000526821 MAP3K1Q13233 1512 aa9.51□□□□□ -0.89
ATPAF1-208ENST00000526821 CHD1O14646 1710 aa9.51□□□□□ -0.89
ATPAF1-208ENST00000526821 FMN1Q68DA7 1419 aa9.51□□□□□ -0.89
ATPAF1-208ENST00000526821 CASKIN1Q8WXD9 1431 aa9.51□□□□□ -0.89
ATPAF1-208ENST00000526821 TRIM26Q12899 539 aaPredicted RBP9.51□□□□□ -0.89
ATPAF1-208ENST00000526821 RTL5Q5HYW3 569 aaPredicted RBP9.51□□□□□ -0.89
ATPAF1-208ENST00000526821 PLEKHG3A1L390 1219 aa9.5□□□□□ -0.89
ATPAF1-208ENST00000526821 SKOR1P84550 965 aa9.5□□□□□ -0.89
ATPAF1-208ENST00000526821 LINC01559Q495D7 138 aa9.5□□□□□ -0.89
ATPAF1-208ENST00000526821 BAP1Q92560 729 aa9.5□□□□□ -0.89
ATPAF1-208ENST00000526821 GOPCQ9HD26 462 aa9.5□□□□□ -0.89
ATPAF1-208ENST00000526821 FYCO1Q9BQS8 1478 aa9.5□□□□□ -0.89
ATPAF1-208ENST00000526821 PCF11O94913 1555 aaKnown RBP9.5□□□□□ -0.89
ATPAF1-208ENST00000526821 KIAA0556O60303 1618 aa9.49□□□□□ -0.89
ATPAF1-208ENST00000526821 ZNF511Q8NB15 262 aa9.49□□□□□ -0.89
ATPAF1-208ENST00000526821 F12P00748 615 aaPredicted RBP9.48□□□□□ -0.89
ATPAF1-208ENST00000526821 SH3BP2P78314 561 aa9.48□□□□□ -0.89
ATPAF1-208ENST00000526821 MYT1Q01538 1121 aa9.48□□□□□ -0.89
ATPAF1-208ENST00000526821 NBPF14Q5TI25 921 aa9.48□□□□□ -0.89
ATPAF1-208ENST00000526821 PPARGC1BQ86YN6 1023 aaKnown RBP9.48□□□□□ -0.89
ATPAF1-208ENST00000526821 MAP10Q9P2G4 905 aa9.48□□□□□ -0.89
ATPAF1-208ENST00000526821 VARSP26640 1264 aaKnown RBP9.47□□□□□ -0.89
ATPAF1-208ENST00000526821 BRPF1P55201 1214 aaPredicted RBP9.47□□□□□ -0.89
ATPAF1-208ENST00000526821 AGERQ15109 404 aa9.47□□□□□ -0.89
ATPAF1-208ENST00000526821 CTC1Q2NKJ3 1217 aa9.47□□□□□ -0.89
ATPAF1-208ENST00000526821 PPP2R2DQ66LE6 453 aa9.47□□□□□ -0.89
ATPAF1-208ENST00000526821 PROCA1Q8NCQ7 364 aaPredicted RBP9.47□□□□□ -0.89
ATPAF1-208ENST00000526821 IL27Q8NEV9 243 aa9.47□□□□□ -0.89
ATPAF1-208ENST00000526821 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.47□□□□□ -0.89
ATPAF1-208ENST00000526821 CLASP1Q7Z460 1538 aa9.46□□□□□ -0.89
ATPAF1-208ENST00000526821 TIAM1Q13009 1591 aa9.46□□□□□ -0.89
ATPAF1-208ENST00000526821 SHROOM2Q13796 1616 aa9.46□□□□□ -0.89
ATPAF1-208ENST00000526821 PER1O15534 1290 aaPredicted RBP9.46□□□□□ -0.9
ATPAF1-208ENST00000526821 ALDH1A1P00352 501 aa9.46□□□□□ -0.9
ATPAF1-208ENST00000526821 PNMA1Q8ND90 353 aa9.46□□□□□ -0.9
ATPAF1-208ENST00000526821 PCGF6Q9BYE7 350 aa9.46□□□□□ -0.9
ATPAF1-208ENST00000526821 WASF2Q9Y6W5 498 aa9.46□□□□□ -0.9
ATPAF1-208ENST00000526821 AXIN1O15169 862 aa9.45□□□□□ -0.9
ATPAF1-208ENST00000526821 KANK4Q5T7N3 995 aaPredicted RBP9.45□□□□□ -0.9
ATPAF1-208ENST00000526821 FAM174AQ8TBP5 190 aa9.45□□□□□ -0.9
ATPAF1-208ENST00000526821 CARMIL2Q6F5E8 1435 aa9.45□□□□□ -0.9
ATPAF1-208ENST00000526821 CFAP43Q8NDM7 1665 aa9.45□□□□□ -0.9
ATPAF1-208ENST00000526821 AP1G2O75843 785 aa9.44□□□□□ -0.9
ATPAF1-208ENST00000526821 AVPP01185 164 aa9.44□□□□□ -0.9
ATPAF1-208ENST00000526821 BPHLQ86WA6 291 aaPredicted RBP9.44□□□□□ -0.9
ATPAF1-208ENST00000526821 LRRC9Q6ZRR7 1453 aa9.43□□□□□ -0.9
ATPAF1-208ENST00000526821 SMPD1P17405 629 aa9.43□□□□□ -0.9
ATPAF1-208ENST00000526821 CTDSPL2Q05D32 466 aa9.43□□□□□ -0.9
ATPAF1-208ENST00000526821 CRIPAKQ8N1N5 446 aa9.43□□□□□ -0.9
ATPAF1-208ENST00000526821 GPKOWQ92917 476 aaPredicted RBP eCLIP9.43□□□□□ -0.9
ATPAF1-208ENST00000526821 PRG4Q92954 1404 aaPredicted RBP9.42□□□□□ -0.9
ATPAF1-208ENST00000526821 J3QL48 77 aa9.42□□□□□ -0.9
ATPAF1-208ENST00000526821 ZNF787Q6DD87 383 aa9.42□□□□□ -0.9
ATPAF1-208ENST00000526821 LCE2BO14633 110 aa9.41□□□□□ -0.9
ATPAF1-208ENST00000526821 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
ATPAF1-208ENST00000526821 TMEM259Q4ZIN3 620 aa9.41□□□□□ -0.9
ATPAF1-208ENST00000526821 AAASQ9NRG9 546 aa9.41□□□□□ -0.9
ATPAF1-208ENST00000526821 LRRIQ1Q96JM4 1722 aa9.41□□□□□ -0.9
ATPAF1-208ENST00000526821 HECW1Q76N89 1606 aa9.41□□□□□ -0.9
ATPAF1-208ENST00000526821 SIAH2O43255 324 aa9.4□□□□□ -0.9
ATPAF1-208ENST00000526821 MPNDQ8N594 471 aa9.4□□□□□ -0.9
ATPAF1-208ENST00000526821 EPRSP07814 1512 aaKnown RBP9.4□□□□□ -0.91
ATPAF1-208ENST00000526821 CCDC18Q5T9S5 1454 aa9.4□□□□□ -0.91
ATPAF1-208ENST00000526821 RAPGEF6Q8TEU7 1601 aa9.39□□□□□ -0.91
ATPAF1-208ENST00000526821 ST8SIA5O15466 376 aa9.39□□□□□ -0.91
ATPAF1-208ENST00000526821 RFC5P40937 340 aa9.39□□□□□ -0.91
ATPAF1-208ENST00000526821 NUP153P49790 1475 aaKnown RBP9.39□□□□□ -0.91
ATPAF1-208ENST00000526821 ABCA8O94911 1581 aa9.38□□□□□ -0.91
ATPAF1-208ENST00000526821 TTBK1Q5TCY1 1321 aaPredicted RBP9.38□□□□□ -0.91
ATPAF1-208ENST00000526821 ZC3H4Q9UPT8 1303 aaKnown RBP9.38□□□□□ -0.91
ATPAF1-208ENST00000526821 FOXJ1Q92949 421 aa9.38□□□□□ -0.91
ATPAF1-208ENST00000526821 ERCC6L2Q5T890 1561 aa9.37□□□□□ -0.91
ATPAF1-208ENST00000526821 PLB1Q6P1J6 1458 aa9.37□□□□□ -0.91
ATPAF1-208ENST00000526821 USP17L8P0C7I0 530 aa9.37□□□□□ -0.91
ATPAF1-208ENST00000526821 ARID5BQ14865 1188 aa9.37□□□□□ -0.91
ATPAF1-208ENST00000526821 LRRN4Q8WUT4 740 aa9.37□□□□□ -0.91
ATPAF1-208ENST00000526821 FKBPLQ9UIM3 349 aa9.37□□□□□ -0.91
ATPAF1-208ENST00000526821 RRBP1Q9P2E9 1410 aaKnown RBP9.37□□□□□ -0.91
ATPAF1-208ENST00000526821 HPS1Q92902 700 aa9.36□□□□□ -0.91
ATPAF1-208ENST00000526821 TLL2Q9Y6L7 1015 aa9.36□□□□□ -0.91
ATPAF1-208ENST00000526821 PTPRGP23470 1445 aa9.36□□□□□ -0.91
ATPAF1-208ENST00000526821 MAGI3Q5TCQ9 1506 aa9.36□□□□□ -0.91
ATPAF1-208ENST00000526821 MAGEB6P1A0A0J9YX57 407 aa9.35□□□□□ -0.91
ATPAF1-208ENST00000526821 NR6A1Q15406 480 aa9.35□□□□□ -0.91
ATPAF1-208ENST00000526821 CDK13Q14004 1512 aaKnown RBP9.35□□□□□ -0.91
ATPAF1-208ENST00000526821 EHBP1L1Q8N3D4 1523 aa9.35□□□□□ -0.91
ATPAF1-208ENST00000526821 PDXDC2PQ6P474 469 aa9.34□□□□□ -0.91
ATPAF1-208ENST00000526821 ARHGEF11O15085 1522 aa9.34□□□□□ -0.91
ATPAF1-208ENST00000526821 PHLDB1Q86UU1 1377 aa9.34□□□□□ -0.91
ATPAF1-208ENST00000526821 APBB1O00213 710 aa9.33□□□□□ -0.92
ATPAF1-208ENST00000526821 ADH1CP00326 375 aa9.33□□□□□ -0.92
ATPAF1-208ENST00000526821 PTK2Q05397 1052 aa9.33□□□□□ -0.92
ATPAF1-208ENST00000526821 SH3BP5LQ7L8J4 393 aa9.33□□□□□ -0.92
ATPAF1-208ENST00000526821 CDK15Q96Q40 435 aa9.33□□□□□ -0.92
ATPAF1-208ENST00000526821 ARHGAP9Q9BRR9 750 aa9.33□□□□□ -0.92
ATPAF1-208ENST00000526821 CARD14Q9BXL6 1004 aa9.33□□□□□ -0.92
ATPAF1-208ENST00000526821 MTUS2Q5JR59 1369 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms