RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 NCOA1Q15788 1441 aa7.11□□□□□ -1.27
SDC2-204ENST00000519914 TULP1O00294 542 aaPredicted RBP7.11□□□□□ -1.27
SDC2-204ENST00000519914 IRF6O14896 467 aa7.11□□□□□ -1.27
SDC2-204ENST00000519914 KDM4AO75164 1064 aa7.11□□□□□ -1.27
SDC2-204ENST00000519914 Q3C1V9 767 aa7.11□□□□□ -1.27
SDC2-204ENST00000519914 MSS51Q4VC12 460 aa7.11□□□□□ -1.27
SDC2-204ENST00000519914 LMOD2Q6P5Q4 547 aa7.11□□□□□ -1.27
SDC2-204ENST00000519914 TOR4AQ9NXH8 423 aa7.11□□□□□ -1.27
SDC2-204ENST00000519914 MBD5Q9P267 1494 aa7.1□□□□□ -1.27
SDC2-204ENST00000519914 PRG4Q92954 1404 aaPredicted RBP7.1□□□□□ -1.27
SDC2-204ENST00000519914 AXIN1O15169 862 aa7.1□□□□□ -1.27
SDC2-204ENST00000519914 MPHOSPH9Q99550 1183 aa7.1□□□□□ -1.27
SDC2-204ENST00000519914 GUCA2AQ02747 115 aa7.09□□□□□ -1.27
SDC2-204ENST00000519914 CHMP7Q8WUX9 453 aaPredicted RBP7.09□□□□□ -1.27
SDC2-204ENST00000519914 USB1Q9BQ65 265 aaKnown RBP7.09□□□□□ -1.27
SDC2-204ENST00000519914 RRP7BPQ9NSQ0 103 aa7.09□□□□□ -1.27
SDC2-204ENST00000519914 ATP10BO94823 1461 aa7.09□□□□□ -1.27
SDC2-204ENST00000519914 SPATA31E1Q6ZUB1 1445 aa7.09□□□□□ -1.28
SDC2-204ENST00000519914 SYMPKQ92797 1274 aaKnown RBP7.08□□□□□ -1.28
SDC2-204ENST00000519914 GMPR2Q9P2T1 348 aaKnown RBP7.08□□□□□ -1.28
SDC2-204ENST00000519914 PREX2Q70Z35 1606 aa7.08□□□□□ -1.28
SDC2-204ENST00000519914 MAST1Q9Y2H9 1570 aa7.08□□□□□ -1.28
SDC2-204ENST00000519914 PTPRGP23470 1445 aa7.08□□□□□ -1.28
SDC2-204ENST00000519914 MINK1Q8N4C8 1332 aaPredicted RBP7.07□□□□□ -1.28
SDC2-204ENST00000519914 TRIM32Q13049 653 aa7.07□□□□□ -1.28
SDC2-204ENST00000519914 DDX10Q13206 875 aaKnown RBP7.07□□□□□ -1.28
SDC2-204ENST00000519914 KRI1Q8N9T8 703 aaKnown RBP7.07□□□□□ -1.28
SDC2-204ENST00000519914 CCDC102AQ96A19 550 aa7.07□□□□□ -1.28
SDC2-204ENST00000519914 UHRF1BP1Q6BDS2 1440 aa7.07□□□□□ -1.28
SDC2-204ENST00000519914 KIAA1107Q9UPP5 1409 aa7.07□□□□□ -1.28
SDC2-204ENST00000519914 ANKRD30AQ9BXX3 1397 aa7.07□□□□□ -1.28
SDC2-204ENST00000519914 ARHGEF12Q9NZN5 1544 aa7.06□□□□□ -1.28
SDC2-204ENST00000519914 C11orf95C9JLR9 678 aaPredicted RBP7.06□□□□□ -1.28
SDC2-204ENST00000519914 MMP16P51512 607 aa7.06□□□□□ -1.28
SDC2-204ENST00000519914 MRGPRX2Q96LB1 330 aa7.06□□□□□ -1.28
SDC2-204ENST00000519914 CHD1O14646 1710 aa7.06□□□□□ -1.28
SDC2-204ENST00000519914 CDC42BPBQ9Y5S2 1711 aa7.06□□□□□ -1.28
SDC2-204ENST00000519914 J3QL48 77 aa7.05□□□□□ -1.28
SDC2-204ENST00000519914 WNT7AO00755 349 aa7.05□□□□□ -1.28
SDC2-204ENST00000519914 HOXA2O43364 376 aa7.05□□□□□ -1.28
SDC2-204ENST00000519914 ANP32CO43423 234 aa7.05□□□□□ -1.28
SDC2-204ENST00000519914 AVPP01185 164 aa7.05□□□□□ -1.28
SDC2-204ENST00000519914 SNIP1Q8TAD8 396 aaKnown RBP7.05□□□□□ -1.28
SDC2-204ENST00000519914 CHIC2Q9UKJ5 165 aa7.05□□□□□ -1.28
SDC2-204ENST00000519914 CNTLNQ9NXG0 1405 aa7.05□□□□□ -1.28
SDC2-204ENST00000519914 ZNF644Q9H582 1327 aaPredicted RBP7.05□□□□□ -1.28
SDC2-204ENST00000519914 DXOO77932 396 aaKnown RBP7.04□□□□□ -1.28
SDC2-204ENST00000519914 SMPD1P17405 629 aa7.04□□□□□ -1.28
SDC2-204ENST00000519914 USP46P62068 366 aa7.04□□□□□ -1.28
SDC2-204ENST00000519914 EIF4G2P78344 907 aaKnown RBP eCLIP7.04□□□□□ -1.28
SDC2-204ENST00000519914 NUTM1Q86Y26 1132 aa7.04□□□□□ -1.28
SDC2-204ENST00000519914 VSIG10Q8N0Z9 540 aa7.04□□□□□ -1.28
SDC2-204ENST00000519914 CRIPAKQ8N1N5 446 aa7.04□□□□□ -1.28
SDC2-204ENST00000519914 L3MBTL2Q969R5 705 aa7.04□□□□□ -1.28
SDC2-204ENST00000519914 CFDP1Q9UEE9 299 aaPredicted RBP7.04□□□□□ -1.28
SDC2-204ENST00000519914 SUPT16HQ9Y5B9 1047 aaKnown RBP7.04□□□□□ -1.28
SDC2-204ENST00000519914 ANKRD50Q9ULJ7 1429 aa7.04□□□□□ -1.28
SDC2-204ENST00000519914 WASHC2AQ641Q2 1341 aa7.04□□□□□ -1.28
SDC2-204ENST00000519914 UNC13BO14795 1591 aa7.03□□□□□ -1.28
SDC2-204ENST00000519914 PLXNC1O60486 1568 aa7.03□□□□□ -1.28
SDC2-204ENST00000519914 HSPA5P11021 654 aaKnown RBP7.03□□□□□ -1.28
SDC2-204ENST00000519914 CTC1Q2NKJ3 1217 aa7.03□□□□□ -1.28
SDC2-204ENST00000519914 C9orf84Q5VXU9 1444 aa7.03□□□□□ -1.28
SDC2-204ENST00000519914 TREML4Q6UXN2 200 aa7.03□□□□□ -1.28
SDC2-204ENST00000519914 SAMD9LQ8IVG5 1584 aa7.03□□□□□ -1.28
SDC2-204ENST00000519914 TRIM52Q96A61 297 aa7.03□□□□□ -1.28
SDC2-204ENST00000519914 GPCPD1Q9NPB8 672 aa7.03□□□□□ -1.28
SDC2-204ENST00000519914 CCDC7Q96M83 1385 aa7.03□□□□□ -1.28
SDC2-204ENST00000519914 RALGAPBQ86X10 1494 aa7.03□□□□□ -1.28
SDC2-204ENST00000519914 ARID4BQ4LE39 1312 aaPredicted RBP7.03□□□□□ -1.28
SDC2-204ENST00000519914 KDM5CP41229 1560 aa7.03□□□□□ -1.28
SDC2-204ENST00000519914 PLEKHD1A6NEE1 506 aa7.02□□□□□ -1.28
SDC2-204ENST00000519914 CLCN1P35523 988 aa7.02□□□□□ -1.28
SDC2-204ENST00000519914 RC3H1Q5TC82 1133 aaKnown RBP7.02□□□□□ -1.28
SDC2-204ENST00000519914 FAM217BQ9NTX9 383 aaPredicted RBP7.02□□□□□ -1.28
SDC2-204ENST00000519914 ABCC2Q92887 1545 aa7.02□□□□□ -1.29
SDC2-204ENST00000519914 UHRF1BP1LA0JNW5 1464 aa7.02□□□□□ -1.29
SDC2-204ENST00000519914 CCDC141Q6ZP82 1450 aa7.02□□□□□ -1.29
SDC2-204ENST00000519914 PLEKHH2Q8IVE3 1493 aa7.02□□□□□ -1.29
SDC2-204ENST00000519914 CLASP1Q7Z460 1538 aa7.02□□□□□ -1.29
SDC2-204ENST00000519914 SKOR1P84550 965 aa7.01□□□□□ -1.29
SDC2-204ENST00000519914 HPS1Q92902 700 aa7.01□□□□□ -1.29
SDC2-204ENST00000519914 MAGI2Q86UL8 1455 aa7.01□□□□□ -1.29
SDC2-204ENST00000519914 ARAP3Q8WWN8 1544 aa7.01□□□□□ -1.29
SDC2-204ENST00000519914 LAMC1P11047 1609 aa7.01□□□□□ -1.29
SDC2-204ENST00000519914 MYO5CQ9NQX4 1742 aa7.01□□□□□ -1.29
SDC2-204ENST00000519914 JUNDP17535 347 aa7.01□□□□□ -1.29
SDC2-204ENST00000519914 SMCPP49901 116 aaPredicted RBP7.01□□□□□ -1.29
SDC2-204ENST00000519914 NBPF8Q3BBV2 869 aa7.01□□□□□ -1.29
SDC2-204ENST00000519914 REPIN1Q9BWE0 567 aaKnown RBP7.01□□□□□ -1.29
SDC2-204ENST00000519914 IQGAP3Q86VI3 1631 aa7□□□□□ -1.29
SDC2-204ENST00000519914 C6orf229H3BNL8 230 aa7□□□□□ -1.29
SDC2-204ENST00000519914 PTCRAQ6ISU1 281 aaPredicted RBP7□□□□□ -1.29
SDC2-204ENST00000519914 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7□□□□□ -1.29
SDC2-204ENST00000519914 ATP13A2Q9NQ11 1180 aa7□□□□□ -1.29
SDC2-204ENST00000519914 ATP10AO60312 1499 aa7□□□□□ -1.29
SDC2-204ENST00000519914 BCORL1Q5H9F3 1711 aa6.99□□□□□ -1.29
SDC2-204ENST00000519914 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.99□□□□□ -1.29
SDC2-204ENST00000519914 TTC37Q6PGP7 1564 aa6.99□□□□□ -1.29
SDC2-204ENST00000519914 WFS1O76024 890 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms