RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 ELL2O00472 640 aaPredicted RBP20.76■□□□□ 0.91
PCDHGA11-202ENST00000518882 SIRT2Q8IXJ6 389 aa20.76■□□□□ 0.91
PCDHGA11-202ENST00000518882 EMILIN1Q9Y6C2 1016 aa20.76■□□□□ 0.91
PCDHGA11-202ENST00000518882 ATP7BP35670 1465 aa20.75■□□□□ 0.91
PCDHGA11-202ENST00000518882 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
PCDHGA11-202ENST00000518882 SETD1AO15047 1707 aaKnown RBP20.74■□□□□ 0.91
PCDHGA11-202ENST00000518882 ARHGAP45Q92619 1136 aa20.74■□□□□ 0.91
PCDHGA11-202ENST00000518882 GCC1Q96CN9 775 aa20.74■□□□□ 0.91
PCDHGA11-202ENST00000518882 MBIPQ9NS73 344 aa20.74■□□□□ 0.91
PCDHGA11-202ENST00000518882 CD2BP2O95400 341 aaKnown RBP20.73■□□□□ 0.91
PCDHGA11-202ENST00000518882 RIMBP3CA6NJZ7 1639 aa20.73■□□□□ 0.91
PCDHGA11-202ENST00000518882 RIMBP3BA6NNM3 1639 aa20.73■□□□□ 0.91
PCDHGA11-202ENST00000518882 RIMBP3Q9UFD9 1639 aa20.73■□□□□ 0.91
PCDHGA11-202ENST00000518882 ZNF853P0CG23 659 aa20.73■□□□□ 0.91
PCDHGA11-202ENST00000518882 ABCC4O15439 1325 aa20.72■□□□□ 0.91
PCDHGA11-202ENST00000518882 IL13P35225 146 aa20.72■□□□□ 0.91
PCDHGA11-202ENST00000518882 IFT57Q9NWB7 429 aa20.72■□□□□ 0.91
PCDHGA11-202ENST00000518882 KNDC1Q76NI1 1749 aa20.72■□□□□ 0.91
PCDHGA11-202ENST00000518882 DLC1Q96QB1 1528 aa20.72■□□□□ 0.91
PCDHGA11-202ENST00000518882 TBC1D9Q6ZT07 1266 aa20.71■□□□□ 0.91
PCDHGA11-202ENST00000518882 ZRANB1Q9UGI0 708 aa20.71■□□□□ 0.91
PCDHGA11-202ENST00000518882 DDX11L8A8MPP1 907 aa20.71■□□□□ 0.91
PCDHGA11-202ENST00000518882 GNAI1P63096 354 aa20.71■□□□□ 0.91
PCDHGA11-202ENST00000518882 TNPO1Q92973 898 aaKnown RBP20.71■□□□□ 0.91
PCDHGA11-202ENST00000518882 STAG3Q9UJ98 1225 aa20.71■□□□□ 0.91
PCDHGA11-202ENST00000518882 HSP90AB1P08238 724 aaKnown RBP20.7■□□□□ 0.9
PCDHGA11-202ENST00000518882 NME9Q86XW9 330 aa20.7■□□□□ 0.9
PCDHGA11-202ENST00000518882 C8orf58Q8NAV2 365 aa20.7■□□□□ 0.9
PCDHGA11-202ENST00000518882 CALD1Q05682 793 aaKnown RBP20.69■□□□□ 0.9
PCDHGA11-202ENST00000518882 TWISTNBQ3B726 338 aaPredicted RBP20.69■□□□□ 0.9
PCDHGA11-202ENST00000518882 CDK12Q9NYV4 1490 aaPredicted RBP20.69■□□□□ 0.9
PCDHGA11-202ENST00000518882 RBM42Q9BTD8 480 aaKnown RBP20.69■□□□□ 0.9
PCDHGA11-202ENST00000518882 CPSF1Q10570 1443 aaKnown RBP20.68■□□□□ 0.9
PCDHGA11-202ENST00000518882 EIF5BO60841 1220 aaKnown RBP20.68■□□□□ 0.9
PCDHGA11-202ENST00000518882 FAM83GA6ND36 823 aa20.67■□□□□ 0.9
PCDHGA11-202ENST00000518882 EDC4Q6P2E9 1401 aaKnown RBP20.67■□□□□ 0.9
PCDHGA11-202ENST00000518882 CHMP4BQ9H444 224 aaKnown RBP20.67■□□□□ 0.9
PCDHGA11-202ENST00000518882 RAB3GAP1Q15042 981 aa20.66■□□□□ 0.9
PCDHGA11-202ENST00000518882 FOXD4L1Q9NU39 408 aa20.66■□□□□ 0.9
PCDHGA11-202ENST00000518882 A2ML1A8K2U0 1454 aa20.66■□□□□ 0.9
PCDHGA11-202ENST00000518882 PRKCSHP14314 528 aaPredicted RBP20.66■□□□□ 0.9
PCDHGA11-202ENST00000518882 MRE11P49959 708 aa20.65■□□□□ 0.9
PCDHGA11-202ENST00000518882 CFAP44Q96MT7 982 aa20.65■□□□□ 0.9
PCDHGA11-202ENST00000518882 CIZ1Q9ULV3 898 aaPredicted RBP20.65■□□□□ 0.9
PCDHGA11-202ENST00000518882 RIMS2Q9UQ26 1411 aa20.65■□□□□ 0.9
PCDHGA11-202ENST00000518882 DCTN1Q14203 1278 aa20.65■□□□□ 0.9
PCDHGA11-202ENST00000518882 RRS1Q15050 365 aaKnown RBP20.65■□□□□ 0.9
PCDHGA11-202ENST00000518882 CPS1P31327 1500 aa20.64■□□□□ 0.9
PCDHGA11-202ENST00000518882 GSPT1P15170 499 aaKnown RBP20.64■□□□□ 0.89
PCDHGA11-202ENST00000518882 AK9Q5TCS8 1911 aa20.64■□□□□ 0.89
PCDHGA11-202ENST00000518882 NCKAP5LQ9HCH0 1330 aa20.64■□□□□ 0.89
PCDHGA11-202ENST00000518882 GRPEL1Q9HAV7 217 aa20.64■□□□□ 0.89
PCDHGA11-202ENST00000518882 K7ELQ4 463 aaPredicted RBP20.63■□□□□ 0.89
PCDHGA11-202ENST00000518882 MON2Q7Z3U7 1717 aa20.63■□□□□ 0.89
PCDHGA11-202ENST00000518882 AATKQ6ZMQ8 1374 aa20.63■□□□□ 0.89
PCDHGA11-202ENST00000518882 REREQ9P2R6 1566 aa20.62■□□□□ 0.89
PCDHGA11-202ENST00000518882 NRXN3Q9Y4C0 1643 aa20.62■□□□□ 0.89
PCDHGA11-202ENST00000518882 WASLO00401 505 aaPredicted RBP20.62■□□□□ 0.89
PCDHGA11-202ENST00000518882 CDC45O75419 566 aa20.61■□□□□ 0.89
PCDHGA11-202ENST00000518882 PLEKHM2Q8IWE5 1019 aa20.61■□□□□ 0.89
PCDHGA11-202ENST00000518882 GAS2L2Q8NHY3 880 aa20.61■□□□□ 0.89
PCDHGA11-202ENST00000518882 GBP4Q96PP9 640 aa20.61■□□□□ 0.89
PCDHGA11-202ENST00000518882 API5Q9BZZ5 524 aaKnown RBP20.61■□□□□ 0.89
PCDHGA11-202ENST00000518882 HSP90AA1P07900 732 aaKnown RBP20.6■□□□□ 0.89
PCDHGA11-202ENST00000518882 GAS2L3Q86XJ1 694 aa20.6■□□□□ 0.89
PCDHGA11-202ENST00000518882 LMOD3Q0VAK6 560 aa20.6■□□□□ 0.89
PCDHGA11-202ENST00000518882 C3P01024 1663 aa20.59■□□□□ 0.89
PCDHGA11-202ENST00000518882 AKAP12Q02952 1782 aa20.59■□□□□ 0.89
PCDHGA11-202ENST00000518882 METP08581 1390 aa20.58■□□□□ 0.88
PCDHGA11-202ENST00000518882 KRT24Q2M2I5 525 aa20.58■□□□□ 0.88
PCDHGA11-202ENST00000518882 SPATA31D1Q6ZQQ2 1576 aa20.58■□□□□ 0.88
PCDHGA11-202ENST00000518882 COG3Q96JB2 828 aa20.58■□□□□ 0.88
PCDHGA11-202ENST00000518882 SSFA2P28290 1259 aa20.57■□□□□ 0.88
PCDHGA11-202ENST00000518882 C16orf71Q8IYS4 520 aaPredicted RBP20.57■□□□□ 0.88
PCDHGA11-202ENST00000518882 NUDT16Q96DE0 195 aaKnown RBP20.57■□□□□ 0.88
PCDHGA11-202ENST00000518882 DCTPP1Q9H773 170 aa20.57■□□□□ 0.88
PCDHGA11-202ENST00000518882 ITSN1Q15811 1721 aa20.57■□□□□ 0.88
PCDHGA11-202ENST00000518882 RGS12O14924 1447 aa20.56■□□□□ 0.88
PCDHGA11-202ENST00000518882 ATP10DQ9P241 1426 aa20.56■□□□□ 0.88
PCDHGA11-202ENST00000518882 KIF24Q5T7B8 1368 aa20.56■□□□□ 0.88
PCDHGA11-202ENST00000518882 TXNDC2Q86VQ3 553 aa20.56■□□□□ 0.88
PCDHGA11-202ENST00000518882 AEBP1Q8IUX7 1158 aa20.56■□□□□ 0.88
PCDHGA11-202ENST00000518882 ISY1Q9ULR0 285 aaKnown RBP20.56■□□□□ 0.88
PCDHGA11-202ENST00000518882 CLCN1P35523 988 aa20.55■□□□□ 0.88
PCDHGA11-202ENST00000518882 INTS3Q68E01 1043 aaKnown RBP20.55■□□□□ 0.88
PCDHGA11-202ENST00000518882 NRKQ7Z2Y5 1582 aa20.55■□□□□ 0.88
PCDHGA11-202ENST00000518882 TTC22Q5TAA0 569 aa20.55■□□□□ 0.88
PCDHGA11-202ENST00000518882 OTUD7AQ8TE49 926 aaPredicted RBP20.55■□□□□ 0.88
PCDHGA11-202ENST00000518882 SKOR2Q2VWA4 1001 aaPredicted RBP20.53■□□□□ 0.88
PCDHGA11-202ENST00000518882 ANKRD44Q8N8A2 993 aa20.52■□□□□ 0.88
PCDHGA11-202ENST00000518882 CCDC61Q9Y6R9 512 aa20.52■□□□□ 0.88
PCDHGA11-202ENST00000518882 ERBB4Q15303 1308 aa20.51■□□□□ 0.87
PCDHGA11-202ENST00000518882 TSPOAP1O95153 1857 aa20.51■□□□□ 0.87
PCDHGA11-202ENST00000518882 MSH6P52701 1360 aa20.51■□□□□ 0.87
PCDHGA11-202ENST00000518882 EIF4A2Q14240 407 aaKnown RBP20.51■□□□□ 0.87
PCDHGA11-202ENST00000518882 SULT6B1Q6IMI4 303 aa20.51■□□□□ 0.87
PCDHGA11-202ENST00000518882 USP26Q9BXU7 913 aa20.51■□□□□ 0.87
PCDHGA11-202ENST00000518882 CEP85Q6P2H3 762 aa20.5■□□□□ 0.87
PCDHGA11-202ENST00000518882 CLEC17AQ6ZS10 378 aa20.5■□□□□ 0.87
PCDHGA11-202ENST00000518882 MCM10Q7L590 875 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms