RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 BMP2KLQ5H9B9 411 aa16.12■□□□□ 0.17
PHF3-212ENST00000515594 FCHSD2O94868 740 aa16.11■□□□□ 0.17
PHF3-212ENST00000515594 PKP1Q13835 747 aa16.11■□□□□ 0.17
PHF3-212ENST00000515594 TWISTNBQ3B726 338 aaPredicted RBP16.11■□□□□ 0.17
PHF3-212ENST00000515594 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
PHF3-212ENST00000515594 MLH3Q9UHC1 1453 aa16.11■□□□□ 0.17
PHF3-212ENST00000515594 SMARCA5O60264 1052 aaPredicted RBP16.1■□□□□ 0.17
PHF3-212ENST00000515594 ALDH1L2Q3SY69 923 aa16.1■□□□□ 0.17
PHF3-212ENST00000515594 MAP2P11137 1827 aaKnown RBP16.1■□□□□ 0.17
PHF3-212ENST00000515594 DDX11L8A8MPP1 907 aa16.1■□□□□ 0.17
PHF3-212ENST00000515594 SOX12O15370 315 aa16.1■□□□□ 0.17
PHF3-212ENST00000515594 NFE2L2Q16236 605 aa16.1■□□□□ 0.17
PHF3-212ENST00000515594 PNNQ9H307 717 aaKnown RBP16.1■□□□□ 0.17
PHF3-212ENST00000515594 MRE11P49959 708 aa16.1■□□□□ 0.17
PHF3-212ENST00000515594 NUTM2FA1L443 756 aa16.09■□□□□ 0.17
PHF3-212ENST00000515594 PNPLA6Q8IY17 1366 aa16.09■□□□□ 0.17
PHF3-212ENST00000515594 FAM135BQ49AJ0 1406 aa16.09■□□□□ 0.17
PHF3-212ENST00000515594 RAB3GAP1Q15042 981 aa16.09■□□□□ 0.17
PHF3-212ENST00000515594 PUS7Q96PZ0 661 aaKnown RBP16.09■□□□□ 0.17
PHF3-212ENST00000515594 AEBP1Q8IUX7 1158 aa16.08■□□□□ 0.17
PHF3-212ENST00000515594 CFAP74Q9C0B2 1584 aa16.08■□□□□ 0.16
PHF3-212ENST00000515594 SNX21Q969T3 373 aa16.08■□□□□ 0.16
PHF3-212ENST00000515594 K7ELQ4 463 aaPredicted RBP16.08■□□□□ 0.16
PHF3-212ENST00000515594 MLECQ14165 292 aa16.07■□□□□ 0.16
PHF3-212ENST00000515594 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
PHF3-212ENST00000515594 FOXD4L5Q5VV16 416 aaPredicted RBP16.06■□□□□ 0.16
PHF3-212ENST00000515594 FOXD4L4Q8WXT5 416 aaPredicted RBP16.06■□□□□ 0.16
PHF3-212ENST00000515594 MED14O60244 1454 aa16.06■□□□□ 0.16
PHF3-212ENST00000515594 MIS18AQ9NYP9 233 aa16.05■□□□□ 0.16
PHF3-212ENST00000515594 ANKRD26Q9UPS8 1709 aa16.05■□□□□ 0.16
PHF3-212ENST00000515594 IL13P35225 146 aa16.05■□□□□ 0.16
PHF3-212ENST00000515594 GCC1Q96CN9 775 aa16.05■□□□□ 0.16
PHF3-212ENST00000515594 NCLP19338 710 aaKnown RBP16.05■□□□□ 0.16
PHF3-212ENST00000515594 TSHZ3Q63HK5 1081 aa16.05■□□□□ 0.16
PHF3-212ENST00000515594 PLEKHM2Q8IWE5 1019 aa16.05■□□□□ 0.16
PHF3-212ENST00000515594 KNDC1Q76NI1 1749 aa16.04■□□□□ 0.16
PHF3-212ENST00000515594 ABCC4O15439 1325 aa16.04■□□□□ 0.16
PHF3-212ENST00000515594 MCM10Q7L590 875 aa16.04■□□□□ 0.16
PHF3-212ENST00000515594 GBP4Q96PP9 640 aa16.04■□□□□ 0.16
PHF3-212ENST00000515594 DIP2CQ9Y2E4 1556 aa16.04■□□□□ 0.16
PHF3-212ENST00000515594 CLCN1P35523 988 aa16.04■□□□□ 0.16
PHF3-212ENST00000515594 TXNDC2Q86VQ3 553 aa16.04■□□□□ 0.16
PHF3-212ENST00000515594 SLC52A1Q9NWF4 448 aa16.04■□□□□ 0.16
PHF3-212ENST00000515594 ARHGEF40Q8TER5 1519 aa16.04■□□□□ 0.16
PHF3-212ENST00000515594 KIF20BQ96Q89 1820 aa16.04■□□□□ 0.16
PHF3-212ENST00000515594 ESPNB1AK53 854 aa16.03■□□□□ 0.16
PHF3-212ENST00000515594 GNAI1P63096 354 aa16.03■□□□□ 0.16
PHF3-212ENST00000515594 DLG5Q8TDM6 1919 aa16.03■□□□□ 0.16
PHF3-212ENST00000515594 MCTP1Q6DN14 999 aa16.03■□□□□ 0.16
PHF3-212ENST00000515594 ZGPATQ8N5A5 531 aaKnown RBP16.03■□□□□ 0.16
PHF3-212ENST00000515594 TMEM131LA2VDJ0 1609 aa16.02■□□□□ 0.16
PHF3-212ENST00000515594 CDC45O75419 566 aa16.02■□□□□ 0.16
PHF3-212ENST00000515594 DDX49Q9Y6V7 483 aaKnown RBP16.02■□□□□ 0.16
PHF3-212ENST00000515594 PTCH1Q13635 1447 aa16.02■□□□□ 0.15
PHF3-212ENST00000515594 ALKQ9UM73 1620 aa16.02■□□□□ 0.15
PHF3-212ENST00000515594 ZNF853P0CG23 659 aa16.01■□□□□ 0.15
PHF3-212ENST00000515594 IFT57Q9NWB7 429 aa16.01■□□□□ 0.15
PHF3-212ENST00000515594 TRIM44Q96DX7 344 aaPredicted RBP16.01■□□□□ 0.15
PHF3-212ENST00000515594 BAG4O95429 457 aaKnown RBP16■□□□□ 0.15
PHF3-212ENST00000515594 UBE2Q2Q8WVN8 375 aa16■□□□□ 0.15
PHF3-212ENST00000515594 MEIS3Q99687 375 aa16■□□□□ 0.15
PHF3-212ENST00000515594 CFAP44Q96MT7 982 aa16■□□□□ 0.15
PHF3-212ENST00000515594 ZFYVE9O95405 1425 aa15.99■□□□□ 0.15
PHF3-212ENST00000515594 SULT6B1Q6IMI4 303 aa15.99■□□□□ 0.15
PHF3-212ENST00000515594 NOL8Q76FK4 1167 aaKnown RBP15.99■□□□□ 0.15
PHF3-212ENST00000515594 PREX1Q8TCU6 1659 aa15.99■□□□□ 0.15
PHF3-212ENST00000515594 F6X3S4 739 aa15.99■□□□□ 0.15
PHF3-212ENST00000515594 CAVIN1Q6NZI2 390 aaKnown RBP15.99■□□□□ 0.15
PHF3-212ENST00000515594 RBM27Q9P2N5 1060 aaKnown RBP15.99■□□□□ 0.15
PHF3-212ENST00000515594 RIMS2Q9UQ26 1411 aa15.99■□□□□ 0.15
PHF3-212ENST00000515594 TTC22Q5TAA0 569 aa15.98■□□□□ 0.15
PHF3-212ENST00000515594 SDSP20132 328 aa15.98■□□□□ 0.15
PHF3-212ENST00000515594 SLC4A10Q6U841 1118 aa15.98■□□□□ 0.15
PHF3-212ENST00000515594 MSH6P52701 1360 aa15.98■□□□□ 0.15
PHF3-212ENST00000515594 CIZ1Q9ULV3 898 aaPredicted RBP15.98■□□□□ 0.15
PHF3-212ENST00000515594 PIK3R4Q99570 1358 aa15.98■□□□□ 0.15
PHF3-212ENST00000515594 BRPF1P55201 1214 aaPredicted RBP15.97■□□□□ 0.15
PHF3-212ENST00000515594 FOXD4L6Q3SYB3 417 aaPredicted RBP15.97■□□□□ 0.15
PHF3-212ENST00000515594 FOXD4L3Q6VB84 417 aaPredicted RBP15.97■□□□□ 0.15
PHF3-212ENST00000515594 ARHGAP45Q92619 1136 aa15.97■□□□□ 0.15
PHF3-212ENST00000515594 CPS1P31327 1500 aa15.97■□□□□ 0.15
PHF3-212ENST00000515594 FOXO3O43524 673 aa15.97■□□□□ 0.15
PHF3-212ENST00000515594 CLTCQ00610 1675 aaKnown RBP15.96■□□□□ 0.15
PHF3-212ENST00000515594 NECTIN2Q92692 538 aa15.96■□□□□ 0.15
PHF3-212ENST00000515594 DCTPP1Q9H773 170 aa15.96■□□□□ 0.15
PHF3-212ENST00000515594 NASPP49321 788 aaPredicted RBP15.96■□□□□ 0.15
PHF3-212ENST00000515594 TPRNQ4KMQ1 711 aa15.96■□□□□ 0.15
PHF3-212ENST00000515594 COG3Q96JB2 828 aa15.96■□□□□ 0.15
PHF3-212ENST00000515594 USP26Q9BXU7 913 aa15.96■□□□□ 0.15
PHF3-212ENST00000515594 API5Q9BZZ5 524 aaKnown RBP15.96■□□□□ 0.14
PHF3-212ENST00000515594 CEP85Q6P2H3 762 aa15.95■□□□□ 0.14
PHF3-212ENST00000515594 G2E3Q7L622 706 aa15.95■□□□□ 0.14
PHF3-212ENST00000515594 NUDT16Q96DE0 195 aaKnown RBP15.95■□□□□ 0.14
PHF3-212ENST00000515594 NSFL1CQ9UNZ2 370 aaKnown RBP15.95■□□□□ 0.14
PHF3-212ENST00000515594 ATP10DQ9P241 1426 aa15.94■□□□□ 0.14
PHF3-212ENST00000515594 METP08581 1390 aa15.94■□□□□ 0.14
PHF3-212ENST00000515594 ZBTB7CA1YPR0 619 aa15.94■□□□□ 0.14
PHF3-212ENST00000515594 WASLO00401 505 aaPredicted RBP15.94■□□□□ 0.14
PHF3-212ENST00000515594 DTNBO60941 627 aa15.94■□□□□ 0.14
PHF3-212ENST00000515594 HSP90AB2PQ58FF8 381 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms