RNA–Protein interactions for RNA: ENST00000508624.5

APC-208, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC, Length 7,406 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-208ENST00000508624 CBFA2T2O43439 604 aa6.27□□□□□ -1.41
APC-208ENST00000508624 TMPOP42166 694 aaKnown RBP6.27□□□□□ -1.41
APC-208ENST00000508624 ARHGAP45Q92619 1136 aa6.27□□□□□ -1.41
APC-208ENST00000508624 WDR62O43379 1518 aa6.27□□□□□ -1.41
APC-208ENST00000508624 RAB11FIP3O75154 756 aa6.27□□□□□ -1.41
APC-208ENST00000508624 PRKCSHP14314 528 aaPredicted RBP6.27□□□□□ -1.41
APC-208ENST00000508624 NFE2L2Q16236 605 aa6.27□□□□□ -1.41
APC-208ENST00000508624 CCDC183Q5T5S1 534 aa6.27□□□□□ -1.41
APC-208ENST00000508624 CYP46A1Q9Y6A2 500 aa6.27□□□□□ -1.41
APC-208ENST00000508624 TERF1P54274 439 aa6.26□□□□□ -1.41
APC-208ENST00000508624 SH2B1Q9NRF2 756 aaPredicted RBP6.26□□□□□ -1.41
APC-208ENST00000508624 DACH1Q9UI36 760 aa6.26□□□□□ -1.41
APC-208ENST00000508624 SOX12O15370 315 aa6.26□□□□□ -1.41
APC-208ENST00000508624 PRKAR2BP31323 418 aa6.26□□□□□ -1.41
APC-208ENST00000508624 POLR3AO14802 1390 aaPredicted RBP6.26□□□□□ -1.41
APC-208ENST00000508624 TXLNBQ8N3L3 684 aa6.26□□□□□ -1.41
APC-208ENST00000508624 ANKRD36BQ8N2N9 1353 aa6.26□□□□□ -1.41
APC-208ENST00000508624 CTAGE5O15320 804 aa6.26□□□□□ -1.41
APC-208ENST00000508624 SAMD9Q5K651 1589 aa6.26□□□□□ -1.41
APC-208ENST00000508624 ARHGEF11O15085 1522 aa6.26□□□□□ -1.41
APC-208ENST00000508624 PTPRCP08575 1304 aa6.25□□□□□ -1.41
APC-208ENST00000508624 CALRP27797 417 aaKnown RBP6.25□□□□□ -1.41
APC-208ENST00000508624 SMARCE1Q969G3 411 aa6.25□□□□□ -1.41
APC-208ENST00000508624 EIF3JO75822 258 aaKnown RBP6.25□□□□□ -1.41
APC-208ENST00000508624 COL17A1Q9UMD9 1497 aaPredicted RBP6.25□□□□□ -1.41
APC-208ENST00000508624 TUBB4AP04350 444 aa6.25□□□□□ -1.41
APC-208ENST00000508624 RASSF8Q8NHQ8 419 aa6.25□□□□□ -1.41
APC-208ENST00000508624 SDF4Q9BRK5 362 aa6.25□□□□□ -1.41
APC-208ENST00000508624 XBP1P17861 261 aa6.25□□□□□ -1.41
APC-208ENST00000508624 SENP3Q9H4L4 574 aaPredicted RBP6.25□□□□□ -1.41
APC-208ENST00000508624 CHMP3Q9Y3E7 222 aa6.25□□□□□ -1.41
APC-208ENST00000508624 ERLIN1O75477 346 aa6.25□□□□□ -1.41
APC-208ENST00000508624 TNMDQ9H2S6 317 aa6.25□□□□□ -1.41
APC-208ENST00000508624 GGNBP2Q9H3C7 697 aa6.25□□□□□ -1.41
APC-208ENST00000508624 RALYLQ86SE5 291 aaKnown RBP6.25□□□□□ -1.41
APC-208ENST00000508624 RNF214Q8ND24 703 aa6.25□□□□□ -1.41
APC-208ENST00000508624 PTPRKQ15262 1439 aa6.24□□□□□ -1.41
APC-208ENST00000508624 FILIP1LQ4L180 1135 aa6.24□□□□□ -1.41
APC-208ENST00000508624 LEKR1Q6ZMV7 388 aa6.24□□□□□ -1.41
APC-208ENST00000508624 RUFY1Q96T51 708 aa6.24□□□□□ -1.41
APC-208ENST00000508624 SCAND2PQ9GZW5 306 aaPredicted RBP6.24□□□□□ -1.41
APC-208ENST00000508624 NUP62CLQ9H1M0 184 aa6.24□□□□□ -1.41
APC-208ENST00000508624 BLMP54132 1417 aaPredicted RBP6.24□□□□□ -1.41
APC-208ENST00000508624 CGNQ9P2M7 1197 aaKnown RBP6.24□□□□□ -1.41
APC-208ENST00000508624 SMTNL1A8MU46 457 aa6.24□□□□□ -1.41
APC-208ENST00000508624 USP8P40818 1118 aa6.24□□□□□ -1.41
APC-208ENST00000508624 ANAPC15P60006 121 aa6.24□□□□□ -1.41
APC-208ENST00000508624 MAP3K11Q16584 847 aa6.24□□□□□ -1.41
APC-208ENST00000508624 TMEM57Q8N5G2 664 aa6.24□□□□□ -1.41
APC-208ENST00000508624 TNPO1Q92973 898 aaKnown RBP6.24□□□□□ -1.41
APC-208ENST00000508624 CEP57L1Q8IYX8 460 aa6.24□□□□□ -1.41
APC-208ENST00000508624 GBP3Q9H0R5 595 aa6.24□□□□□ -1.41
APC-208ENST00000508624 BRMS1Q9HCU9 246 aa6.24□□□□□ -1.41
APC-208ENST00000508624 KIAA0556O60303 1618 aa6.24□□□□□ -1.41
APC-208ENST00000508624 CSB-PGBD3P0DP91 1061 aa6.24□□□□□ -1.41
APC-208ENST00000508624 CCAR2Q8N163 923 aaKnown RBP6.23□□□□□ -1.41
APC-208ENST00000508624 MYO6Q9UM54 1294 aa6.23□□□□□ -1.41
APC-208ENST00000508624 ERICH2A1L162 156 aa6.23□□□□□ -1.41
APC-208ENST00000508624 SMC5Q8IY18 1101 aa6.23□□□□□ -1.41
APC-208ENST00000508624 TTC5Q8N0Z6 440 aa6.23□□□□□ -1.41
APC-208ENST00000508624 SURF6O75683 361 aaKnown RBP6.23□□□□□ -1.41
APC-208ENST00000508624 CEP89Q96ST8 783 aa6.23□□□□□ -1.41
APC-208ENST00000508624 CABP2Q9NPB3 220 aa6.23□□□□□ -1.41
APC-208ENST00000508624 RBM25P49756 843 aaKnown RBP6.23□□□□□ -1.41
APC-208ENST00000508624 SLC12A5Q9H2X9 1139 aa6.23□□□□□ -1.41
APC-208ENST00000508624 URB2Q14146 1524 aaKnown RBP6.23□□□□□ -1.41
APC-208ENST00000508624 C8orf34Q49A92 452 aa6.23□□□□□ -1.41
APC-208ENST00000508624 DDX19AQ9NUU7 478 aaKnown RBP6.23□□□□□ -1.41
APC-208ENST00000508624 ADAMTS12P58397 1594 aa6.23□□□□□ -1.41
APC-208ENST00000508624 GSDMDP57764 484 aa6.22□□□□□ -1.41
APC-208ENST00000508624 DCTN1Q14203 1278 aa6.22□□□□□ -1.41
APC-208ENST00000508624 IQCEQ6IPM2 695 aa6.22□□□□□ -1.41
APC-208ENST00000508624 CALCOCO1Q9P1Z2 691 aa6.22□□□□□ -1.41
APC-208ENST00000508624 FIBPO43427 364 aa6.22□□□□□ -1.41
APC-208ENST00000508624 FOXD4L6Q3SYB3 417 aaPredicted RBP6.22□□□□□ -1.41
APC-208ENST00000508624 FOXD4L3Q6VB84 417 aaPredicted RBP6.22□□□□□ -1.41
APC-208ENST00000508624 RTEL1-TNFRSF6BF6WH68 1400 aa6.22□□□□□ -1.41
APC-208ENST00000508624 HMOX1P09601 288 aa6.22□□□□□ -1.41
APC-208ENST00000508624 MCM3P25205 808 aa6.22□□□□□ -1.41
APC-208ENST00000508624 KLHL34Q8N239 644 aa6.22□□□□□ -1.41
APC-208ENST00000508624 NPHP1O15259 732 aa6.22□□□□□ -1.41
APC-208ENST00000508624 GLRX3O76003 335 aaKnown RBP6.22□□□□□ -1.41
APC-208ENST00000508624 CDKL5O76039 1030 aa6.22□□□□□ -1.41
APC-208ENST00000508624 BAG4O95429 457 aaKnown RBP6.22□□□□□ -1.41
APC-208ENST00000508624 NUCB1Q02818 461 aa6.22□□□□□ -1.41
APC-208ENST00000508624 MLECQ14165 292 aa6.22□□□□□ -1.41
APC-208ENST00000508624 SSH1Q8WYL5 1049 aa6.22□□□□□ -1.41
APC-208ENST00000508624 TSR2Q969E8 191 aaKnown RBP6.22□□□□□ -1.41
APC-208ENST00000508624 PAXBP1Q9Y5B6 917 aa6.22□□□□□ -1.41
APC-208ENST00000508624 GOLGA6L9A6NEM1 432 aa6.22□□□□□ -1.41
APC-208ENST00000508624 BLOC1S2Q6QNY1 142 aa6.22□□□□□ -1.41
APC-208ENST00000508624 AMOTL1Q8IY63 956 aa6.22□□□□□ -1.41
APC-208ENST00000508624 KIF1BPQ96EK5 621 aa6.22□□□□□ -1.41
APC-208ENST00000508624 FSD1Q9BTV5 496 aa6.22□□□□□ -1.41
APC-208ENST00000508624 FAM107BQ9H098 131 aa6.22□□□□□ -1.41
APC-208ENST00000508624 ABCA5Q8WWZ7 1642 aa6.22□□□□□ -1.41
APC-208ENST00000508624 SART3Q15020 963 aaKnown RBP6.22□□□□□ -1.41
APC-208ENST00000508624 LARP1BQ659C4 914 aaKnown RBP6.22□□□□□ -1.41
APC-208ENST00000508624 LUC7LQ9NQ29 371 aaKnown RBP6.22□□□□□ -1.41
APC-208ENST00000508624 C20orf194Q5TEA3 1177 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms